Information report for fgenesh2_kg.4__2091__AT2G39940.1
Gene Details
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Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Arabidopsis thaliana: AT2G39940
- Brassica napus: BnaA03G0195200ZS
- Brassica oleracea: Bo3g034570, Bo4g025750, Bo4g188680, Bo4g188660
- Brassica rapa: Bra000156, Bra005000, Bra017044, Bra017045
- Citrullus lanatus: Cla97C07G132430
- Juglans regia: Jr12_24030
- Manihot esculenta: MANES_07G125200, MANES_10G017900
- Prunus avium: Pav_sc0002574.1_g060.1.mk
- Prunus persica: PRUPE_2G246000
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: D7LDU3
- RefSeq: XP_002881684.1
- EMBL: GL348716
- AlphaFoldDB: D7LDU3
- InterPro: IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF43
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: D7LDU3
- CDD: cd22159
- eggNOG: KOG1947
- STRING: 81972.D7LDU3
- HOGENOM: CLU_022456_2_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.4__2091__AT2G39940.1
ATTATTTGCTATTTTACTAATGTTATCAAAACAATCACAACCACAAATTACCAAAAAAAAAAAACAACCACAAAATCTTTGGGGTTTTATTAAAGAAAGAAGAGTAAACAGACCCCTGTGGAAAAATAAAGAAGTGATGACCATACAAACAAGACTCTATGTAATCTCCCAAAAACATCTGACGATACAACATGAATCAAAAATAAAGAACCAAAAGTAGACAGTTGTTCGTTGAAACCCCAAAACTCGACACTAGAAAAGATTAACCAAATCTTTATATACAAACCTGTTTCTTAGTCCAATCATATTGGCTCCCTCAGGACTATAACAGTTGTTGGGCAATCTGTTCTCTGACCAGCCAGAGAGTAGTAAGCCAATATATGAGCCGGATGCTCCATCTCTCTTATCTCTCCTAGCTGATTCACTTCCGGTACTTTTCTCGATGGTATCAGCTCGATGTTCCAGTACGGTCTAGCCATCTGCATTAGATCTTGTCCCGTCATTGATGCTCTGTAACCTTGTACCCACAAATATCTCAGCGAAGGCAATTTTGTAACCGCTGCAGCGATTGCTCGCTCGCTGAAGCAACAACCTCTCATCTCTAGCTTCTGTAGATTTGGACAACCTCTTGAGAATTCCATTAGACCCTCGTCTGATTCACCTACGTAACCCAGCAGCATCCATCTCACGTTTGGACTGTACTGTCCGATGTACCTTAAGCCCAAGTCGGTTAAGCCGCCTTGTCTGAGATAGAATGCAAACCGTCTGAGTTTCTTGCATCCAATCAAGAGGGATCGCACTCCGTTGTCCAATGGTAAATCTGTAATCCTTTCTTCCCGGTCGAGTAAGACAAGGCGGAAGTCACAGAGGTTTTTCAGATATGTGCCTATGCTTTCAAGAGATTCGTTAGTAATGTCTGAGACATACACCGCCATGTATTCTAGCTGCTGGCAGCCCTGAGCCAAAGCGATTAATCCTCTTTGTGAGACTAAGCCTTCTTCGTCCTCCATTCCTTGTTCATCTGCACCCCGTTCAATCCTCAGCCGCTTCAACTGCTTACAGTACTGTGCAAGAACCTCTAGACCCCTATCTCCAATTACATTCCTTGTCTGAAGAAAAACAACAAGAATTGTCAGTCTCATATGTATGTAAAGACTAAATAGAACCAATATTGCATTCCTATCCCTTATCTCCCACATTTTCTACACTGGAGGACCATCATTACAACGCTAGATTTTATGATAGTTGAAAAGTGTAGATTCGATAAAAAGATCATATTAATCGCTTAGAAATATTTCGTGAACAAATAGGAGCACCATTTAACACTAACAACGCAGTCCCAAATATGTAGCTAAATAGAAAAGACAGCAAAGTTAAACATTTACCTCGAGAACTTCCAAATTAGGACACTTTTGGATTAGCGTACAATGATCTTCAGTTTCTAGCAATGCATAAAGCAAATCCAGCTTTCGGATCTGGGCCGCGAATGGAAATAGTATTGGCATTTCATTAGGTCCCATATAAGAGAGGCCTAGACGACATAGTTTTCGGGGGAAGACCAGATTCATGTACTTCTCAGGCATTCCAATATCCTCATTCAGGGAGCCACCACAAAATTCTTCAAGATTAGCTGCGGCCTTAAAGAACCCAACTAGTTCCAAAATCTCACAGTCACCGACCTTCACAGAAACCAGGGAGCGGCAATTTCTAGCTATGGTTTCCAAGTCTTTGGGGCTGATTTTGGCAAACTCCGTCATGTAGAAGTTTAAAACCTCAAGAGATGTGTTGTGCTGAGCAAGCTCATGAAGCCACTTACCATCCTTTTCAATAAAAGAACTCTCTTCCATTAACAACGTTTTTATTTTCCTGGAGAAGACAACAGACAGAAACATGAATAAAGTGAGAACCAACTCAACATATTTGGATACTCAGCTAAAATTGAATATGCAGAACAGCCGCAGCAGAATCAAGGATTCAAAAACCACATAATACACAAGACAAAAGATGTCAGATATCAATCTTTTTGCTATATATGCATAACAGAAGTGCAAACTGTAGTACGAAACCAAATAAAGATAAGGTTCACCAAAGAGGGAAAGAATATGTTGAAAGATAACTGAAGATAATTGCAATTACTGCTTTAATAGCAATCATAACAGTTGCAGAGCAATTAAGGATATAGAATAAACAGAAACTCCTAGATAACTGAAATGAATGTTTCTGCTTATATAACTCTTGGTGTTAAGTAGAGTAAGAAATCAAATAAAGTAAGGTTCAACAATTCCATTAAAGAGAAGAAGTATGCACCAAAGTTACTACTTGCTCAATTGAGCTAAAGAAGATCACATCTTTACAAACACAAACTTCAAGATATGGTTCTTTGGTACAACGAAGACTTATAAGTTAAAGAAAAAAAAAGCCAAGTGAATTCTTGTTCTACAGTTGTAGTCAAAGTAGGAAATGATAAGAGAGTAGCAAAAGTATGTGCTAAACCTCAAAAGCATCGATTCAAAGGAGCAAACTCAATTCTTGATAGCTACAAGATACTGAGAATAAGAAAGTGTACCTGCAGTGTGTAACGATGCTCAAAAGTCCATCAGTAGTGAAACCAGAGCACTTATCGAGCTTCAAAGCTTCAAGATCATCTGCTCTGGCTTTAGCTAAACGATCCAGATCTAAGTCACTGACAATCATCCGTCGGAAGTGAACCGATTTGAGCTGCTTAAGCGATTTAGAAATCTCAGTAACCCAAGGAGTAACATATCCTCCCCAGTTCTCCGGGATGAGATTAAACATAGCTGCTCTAGGCTTGCCTTTAAGCTTAAGCGACCTCAAGTTCGGAAATCGACGGCTAAGACGATCAGGCGTCGCAGTGTAGCAAAGCGCCATAGTCACATGTTCTCTCGTCTCGGAATCAATCTTGAACCATCTACGACACACCAAAGACGCCGAATCGCGATCTTTCGGGTCGGTTATATACGTCATGACTTGCTCGATGACGTCATCAACCGTCGCGACGCAGCTCAATCTACACTTCTTGATATCAGGATCCTCCATCGGATCGAAGAAGAAAAAAAAAGAGATTCGATTTAGTGAAGAAACCGACGACTTCGAATTGAAATCGAGGTCGCAGATCCACACATAAACACAGTGAGGAGATGAAGAAGGAAGGAAGCAAAGAGATTGAGAGTGAAGGAGAAGGAGACACGCGTAGGAAGAAGAGGCGGATTGGGAGGAGGAAGAAGAAAGTGGGA
CDS Sequence
- >fgenesh2_kg.4__2091__AT2G39940.1
ATGGAGGATCCTGATATCAAGAAGTGTAGATTGAGCTGCGTCGCGACGGTTGATGACGTCATCGAGCAAGTCATGACGTATATAACCGACCCGAAAGATCGCGATTCGGCGTCTTTGGTGTGTCGTAGATGGTTCAAGATTGATTCCGAGACGAGAGAACATGTGACTATGGCGCTTTGCTACACTGCGACGCCTGATCGTCTTAGCCGTCGATTTCCGAACTTGAGGTCGCTTAAGCTTAAAGGCAAGCCTAGAGCAGCTATGTTTAATCTCATCCCGGAGAACTGGGGAGGATATGTTACTCCTTGGGTTACTGAGATTTCTAAATCGCTTAAGCAGCTCAAATCGGTTCACTTCCGACGGATGATTGTCAGTGACTTAGATCTGGATCGTTTAGCTAAAGCCAGAGCAGATGATCTTGAAGCTTTGAAGCTCGATAAGTGCTCTGGTTTCACTACTGATGGACTTTTGAGCATCGTTACACACTGCAGGAAAATAAAAACGTTGTTAATGGAAGAGAGTTCTTTTATTGAAAAGGATGGTAAGTGGCTTCATGAGCTTGCTCAGCACAACACATCTCTTGAGGTTTTAAACTTCTACATGACGGAGTTTGCCAAAATCAGCCCCAAAGACTTGGAAACCATAGCTAGAAATTGCCGCTCCCTGGTTTCTGTGAAGGTCGGTGACTGTGAGATTTTGGAACTAGTTGGGTTCTTTAAGGCCGCAGCTAATCTTGAAGAATTTTGTGGTGGCTCCCTGAATGAGGATATTGGAATGCCTGAGAAGTACATGAATCTGGTCTTCCCCCGAAAACTATGTCGTCTAGGCCTCTCTTATATGGGACCTAATGAAATGCCAATACTATTTCCATTCGCGGCCCAGATCCGAAAGCTGGATTTGCTTTATGCATTGCTAGAAACTGAAGATCATTGTACGCTAATCCAAAAGTGTCCTAATTTGGAAGTTCTCGAGACAAGGAATGTAATTGGAGATAGGGGTCTAGAGGTTCTTGCACAGTACTGTAAGCAGTTGAAGCGGCTGAGGATTGAACGGGGTGCAGATGAACAAGGAATGGAGGACGAAGAAGGCTTAGTCTCACAAAGAGGATTAATCGCTTTGGCTCAGGGCTGCCAGCAGCTAGAATACATGGCGGTGTATGTCTCAGACATTACTAACGAATCTCTTGAAAGCATAGGCACATATCTGAAAAACCTCTGTGACTTCCGCCTTGTCTTACTCGACCGGGAAGAAAGGATTACAGATTTACCATTGGACAACGGAGTGCGATCCCTCTTGATTGGATGCAAGAAACTCAGACGGTTTGCATTCTATCTCAGACAAGGCGGCTTAACCGACTTGGGCTTAAGGTACATCGGACAGTACAGTCCAAACGTGAGATGGATGCTGCTGGGTTACGTAGGTGAATCAGACGAGGGTCTAATGGAATTCTCAAGAGGTTGTCCAAATCTACAGAAGCTAGAGATGAGAGGTTGTTGCTTCAGCGAGCGAGCAATCGCTGCAGCGGTTACAAAATTGCCTTCGCTGAGATATTTGTGGGTACAAGGTTACAGAGCATCAATGACGGGACAAGATCTAATGCAGATGGCTAGACCGTACTGGAACATCGAGCTGATACCATCGAGAAAAGTACCGGAAGTGAATCAGCTAGGAGAGATAAGAGAGATGGAGCATCCGGCTCATATATTGGCTTACTACTCTCTGGCTGGTCAGAGAACAGATTGCCCAACAACTGTTATAGTCCTGAGGGAGCCAATATGA
Protein Sequence
- >fgenesh2_kg.4__2091__AT2G39940.1
MEDPDIKKCRLSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISKSLKQLKSVHFRRMIVSDLDLDRLAKARADDLEALKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFIEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDCEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQQLEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLRYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRKVPEVNQLGEIREMEHPAHILAYYSLAGQRTDCPTTVIVLREPI