Information report for fgenesh2_kg.3__1467__AT3G13682.1
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.;Encodes a histone acetylase related to Arabidopsis FLOWERING LOCUS D
Homologous
- Actinidia chinensis: CEY00_Acc21695
- Beta vulgaris: BVRB_4g087230
- Brassica napus: BnaC01G0445600ZS, BnaA01G0358400ZS
- Brassica oleracea: Bo1g135030
- Brassica rapa: Bra021500
- Daucus carota: DCAR_009981
- Gossypium hirsutum: Gohir.D13G148900
- Juglans regia: Jr09_14540
- Manihot esculenta: MANES_03G115600
- Populus trichocarpa: POPTR_011G127600v3
- Prunus avium: Pav_sc0002607.1_g020.1.mk
- Rosa chinensis: RchiOBHm_Chr5g0035141
- Vitis vinifera: VIT_19s0014g03430
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: D7L1H5
- RefSeq: XP_002884982.1
- EMBL: GL348715
- AlphaFoldDB: D7L1H5
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF373
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- eggNOG: KOG0029
- STRING: 81972.D7L1H5
- HOGENOM: CLU_004498_5_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.3__1467__AT3G13682.1
TAAGGGATAATGCATTGCCCTGCAACAACATGGGTCCTGCTTCTGCCTCTGCGTGCGTTAGCTATGACACTGATCAACGCACCACCTGTGTCTAGTACTGAGTTGGCCCCCATTAGCTTTAATCCAAGAGTATTCATCAGACACGACAGTTTGCTCTCATTACTACTTTCGTCCAATTCTTGGATCTTGTTAGCTTGCTCCCTGGAAAGAATACTGTAAAGCTGAAGACGATTCGTTGGATCGTCTTCAAAGTTGTCAAAACAAACTCTGACTAATCCAAACGATTTCAGATCCTCGGTTAATGGGTTGAAGACAAATGACAACTTCCCAGTTGCAATGTCGGGTCTTTTGAACAGATCTTCAAGAACATTCATGTTAACTCCACTGTATCTTTGAACAGGTTTCTTTGGATTAGAGCGAAAATAATTCGCAACATGTAGAATCTGCGAGGCTTCTCTTAAACCGCTTAAGTAGGCACCGTGCATTGTGGCTGGATGTTGCCTTGTCGTGGCCTCACCAGCAAAGAACAGACGGTTACTAACACTTTCAGCAAGAATGTCGTAGTCCACGCCAGATGAACCAACCCTTACATGAGAATATGACCCATATGACAAAGGATCACTTCCCCATCTAGTGCAAACCGTCTGTATTGGGTCAGGCACAACAACACCTTTAGGACCATATATGCCTGCAAATATGTCAAAAACATTGTTATAGCCAGAACTTGGGAGTAGCAAAAGGTTGATGACAATATCAAATATTACCTCTGAGTTTTTTCAAAACACGGTGAAGTAAAACAGATGGTTCTGTGCACTCAAATCGTTGAGCAGCTTCCCCAGCAACTAAGGCAACCAAGGCAGGGCCACCAGAGACTGTATGGTAGGCATAGAACAGAAAGAACTCTCCTCGGTTGATGCTACTCTCGTTGAGGCATCCAAACGTGTCTAACTCGTCACCCCAAAAGACAGACGGGAAAAGCATGGCAACTTTGTTCAGAAGGCCAAACCCCAACCTGTCAATTGCTGCTTGTTTTCTTCTAGGTAACTCTGGCTCAAACTTGATAGATCTCTTCTTCAAGACCCCGAGCGGCACGGTGCAAAGAATCATGTCAGCTTGAAATATCTGGCTACCAGAAATGACTTCAACTCCTCCGTCTCCATACTTGATAGTGTCAACGCTTTTCCCATAGATTATGGGTACCCCTTCAGCTAATGCATTTATCAGTCTCCAGTTTCCACCAGCAAGAAAACAATGATCCCCACCCATTTCGTAAGGATCATCCTGATCCCAGTAAGCAGCTGGAAAGATTCGAAAGACACCCAGCGTTAGCATATTCCAAGTTAGCAAGGTGCCAGTCAAAAAGTTTTCTTTCCTCTGAATCTTTAGCTACACCATACAGTACCCTAAGAGTCTCCAAGACTTCACCCAAAGAAATCTTCTTAGCTGCCCCTTCCATCATCTCCCTCACTTCGGTGACCTTGTCAAGCAGTTTGTTGAAACCAAACTCAACATTGGAGTCAGCTACTTTATCGACAAGTGCTCCCTCTGAATTATACAAAGGACAGTTGTCTCTAACCTTGTGAAGAGGAATAGAAAGCTGTCTTGCAAGAACTCCAAGTGGGTTCGCATGTAAACCCGTGATTACACTGCCACCGAGTTCAACAGCTGCAAATCTATCCTTATCTCCCATCTTCTGAGTGTACACTCGTCCACCAGGACGACTCCTACCTTCTAAAACAAGAACCTTAAACCCAAATGACAAAAGCTGTCTTGCAGCAGCCAGACCAGCAAGTCCAGCACCAACAACAATGACTGATCCCTCCGTACCCTCTTCAGGAATATAAGGAGCAAACAATGGAGAAACCCCAAAATTGATGTATCCATTAAACAAGAGAAAATCATAAGCAGCTGAAATCAAATGCTCAAAGTCACTACTCACAGTTTCTCTAATCTGATCTTTAAGTAGCCAAATCCCAACATTACTCCTCCACCTAGCTACTATATGATTCCGAACAACAATGTAATCGTTCTGCTCTTTCCCGCCCAATTCTCTTACAACTCCAGCTCGAATCTCTTCTTCAAGCAATTCGTCGATTGGGAAACCTACGGACAAAGCTATCAGAGCCTCAGTCTCAGTTTCTTTCTCCAAATCTTGCTTCGTCCTGTACTTTTTCTTCGAATTTCCACCAAATTGCTTCTCAATCAAATCATCCATCGCATTCTCGTCGTAGTTCTTCCTACTTACTTTCCTCCTGTTCCTCCTCGGAGCCGTTCGATCTAACGCCGGAGCATCCAT
CDS Sequence
- >fgenesh2_kg.3__1467__AT3G13682.1
ATGGATGCTCCGGCGTTAGATCGAACGGCTCCGAGGAGGAACAGGAGGAAAGTAAGTAGGAAGAACTACGACGAGAATGCGATGGATGATTTGATTGAGAAGCAATTTGGTGGAAATTCGAAGAAAAAGTACAGGACGAAGCAAGATTTGGAGAAAGAAACTGAGACTGAGGCTCTGATAGCTTTGTCCGTAGGTTTCCCAATCGACGAATTGCTTGAAGAAGAGATTCGAGCTGGAGTTGTAAGAGAATTGGGCGGGAAAGAGCAGAACGATTACATTGTTGTTCGGAATCATATAGTAGCTAGGTGGAGGAGTAATGTTGGGATTTGGCTACTTAAAGATCAGATTAGAGAAACTGTGAGTAGTGACTTTGAGCATTTGATTTCAGCTGCTTATGATTTTCTCTTGTTTAATGGATACATCAATTTTGGGGTTTCTCCATTGTTTGCTCCTTATATTCCTGAAGAGGGTACGGAGGGATCAGTCATTGTTGTTGGTGCTGGACTTGCTGGTCTGGCTGCTGCAAGACAGCTTTTGTCATTTGGGTTTAAGGTTCTTGTTTTAGAAGGTAGGAGTCGTCCTGGTGGACGAGTGTACACTCAGAAGATGGGAGATAAGGATAGATTTGCAGCTGTTGAACTCGGTGGCAGTGTAATCACGGGTTTACATGCGAACCCACTTGGAGTTCTTGCAAGACAGCTTTCTATTCCTCTTCACAAGGTTAGAGACAACTGTCCTTTGTATAATTCAGAGGGAGCACTTGTCGATAAAGTAGCTGACTCCAATGTTGAGTTTGGTTTCAACAAACTGCTTGACAAGGTCACCGAAGTGAGGGAGATGATGGAAGGGGCAGCTAAGAAGATTTCTTTGGGTGAACTAAAGATTCAGAGGAAAGAAAACTTTTTGACTGGCACCTTGCTAACTTGGAATATGCTAACGCTGGGTGTCTTTCGAATCTTTCCAGCTGCTTACTGGGATCAGGATGATCCTTACGAAATGGGTGGGGATCATTGTTTTCTTGCTGGTGGAAACTGGAGACTGATAAATGCATTAGCTGAAGGGGTACCCATAATCTATGGGAAAAGCGTTGACACTATCAAGTATGGAGACGGAGGAGTTGAAGTCATTTCTGGTAGCCAGATATTTCAAGCTGACATGATTCTTTGCACCGTGCCGCTCGGGGTCTTGAAGAAGAGATCTATCAAGTTTGAGCCAGAGTTACCTAGAAGAAAACAAGCAGCAATTGACAGGTTGGGGTTTGGCCTTCTGAACAAAGTTGCCATGCTTTTCCCGTCTGTCTTTTGGGGTGACGAGTTAGACACGTTTGGATGCCTCAACGAGAGTAGCATCAACCGAGGAGAGTTCTTTCTGTTCTATGCCTACCATACAGTCTCTGGTGGCCCTGCCTTGGTTGCCTTAGTTGCTGGGGAAGCTGCTCAACGATTTGAGTGCACAGAACCATCTGTTTTACTTCACCGTGTTTTGAAAAAACTCAGAGGCATATATGGTCCTAAAGGTGTTGTTGTGCCTGACCCAATACAGACGGTTTGCACTAGATGGGGAAGTGATCCTTTGTCATATGGGTCATATTCTCATGTAAGGGTTGGTTCATCTGGCGTGGACTACGACATTCTTGCTGAAAGTGTTAGTAACCGTCTGTTCTTTGCTGGTGAGGCCACGACAAGGCAACATCCAGCCACAATGCACGGTGCCTACTTAAGCGGTTTAAGAGAAGCCTCGCAGATTCTACATGTTGCGAATTATTTTCGCTCTAATCCAAAGAAACCTGTTCAAAGATACAGTGGAGTTAACATGAATGTTCTTGAAGATCTGTTCAAAAGACCCGACATTGCAACTGGGAAGTTGTCATTTGTCTTCAACCCATTAACCGAGGATCTGAAATCGTTTGGATTAGTCAGAGTTTGTTTTGACAACTTTGAAGACGATCCAACGAATCGTCTTCAGCTTTACAGTATTCTTTCCAGGGAGCAAGCTAACAAGATCCAAGAATTGGACGAAAGTAGTAATGAGAGCAAACTGTCGTGTCTGATGAATACTCTTGGATTAAAGCTAATGGGGGCCAACTCAGTACTAGACACAGGTGGTGCGTTGATCAGTGTCATAGCTAACGCACGCAGAGGCAGAAGCAGGACCCATGTTGTTGCAGGGCAATGCATTATCCCTTAA
Protein Sequence
- >fgenesh2_kg.3__1467__AT3G13682.1
MDAPALDRTAPRRNRRKVSRKNYDENAMDDLIEKQFGGNSKKKYRTKQDLEKETETEALIALSVGFPIDELLEEEIRAGVVRELGGKEQNDYIVVRNHIVARWRSNVGIWLLKDQIRETVSSDFEHLISAAYDFLLFNGYINFGVSPLFAPYIPEEGTEGSVIVVGAGLAGLAAARQLLSFGFKVLVLEGRSRPGGRVYTQKMGDKDRFAAVELGGSVITGLHANPLGVLARQLSIPLHKVRDNCPLYNSEGALVDKVADSNVEFGFNKLLDKVTEVREMMEGAAKKISLGELKIQRKENFLTGTLLTWNMLTLGVFRIFPAAYWDQDDPYEMGGDHCFLAGGNWRLINALAEGVPIIYGKSVDTIKYGDGGVEVISGSQIFQADMILCTVPLGVLKKRSIKFEPELPRRKQAAIDRLGFGLLNKVAMLFPSVFWGDELDTFGCLNESSINRGEFFLFYAYHTVSGGPALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPDPIQTVCTRWGSDPLSYGSYSHVRVGSSGVDYDILAESVSNRLFFAGEATTRQHPATMHGAYLSGLREASQILHVANYFRSNPKKPVQRYSGVNMNVLEDLFKRPDIATGKLSFVFNPLTEDLKSFGLVRVCFDNFEDDPTNRLQLYSILSREQANKIQELDESSNESKLSCLMNTLGLKLMGANSVLDTGGALISVIANARRGRSRTHVVAGQCIIP