Information report for fgenesh2_kg.2__351__AT1G61040.1
Gene Details
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Functional Annotation
- Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.
Homologous
- Actinidia chinensis: CEY00_Acc09571, CEY00_Acc17351
- Brassica napus: Bnascaffold0485G0000200ZS, Bnascaffold0097G0000100ZS, Bnascaffold0077G0000300ZS
- Brassica oleracea: Bo4g086470, Bo1g094620
- Brassica rapa: Bra031459
- Glycine max: Glyma.07G194200, Glyma.13G182500
- Gossypium hirsutum: Gohir.D10G024500, Gohir.A10G023800
- Juglans regia: Jr04_17220
- Manihot esculenta: MANES_16G024900
- Populus trichocarpa: POPTR_011G047900v3, POPTR_004G039500v3
Gene Resources
- Pfam: PF03126
- UniProt: D7KW58
- RefSeq: XP_002888111.1
- EMBL: GL348714
- AlphaFoldDB: D7KW58
- InterPro: IPR004343 , IPR036128
- PANTHER: PTHR13115 , PTHR13115:SF8
- SUPFAM: SSF159042
- PROSITE: PS51360
- Gene3D: 3.90.70.200
- OrthoDB: D7KW58
- eggNOG: KOG2402
- STRING: 81972.D7KW58
- HOGENOM: CLU_018644_1_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.2__351__AT1G61040.1
AAGATTTAATTTTCTAATTTCATGTAGTCATACACTAATCAGGAGAATTCACACAAAAACGAGTACAGAAATATTTCAAGAAAAAAAAAAAACAAATTGATCTAAACATTTTGAGAGTACAAAAGAAAAATGTGAAGAGAAGAAGAACCAAGAAGTAGTTTTCAGAAGATAATGAAACACTGAGACTTGAAAAAAATCCAGAAATCAGAGAAGACCTCTCCTTCTCTTGTAATCACTAACAGTTAAAGTAAGGCCATGTCTCTTGCCATCGTTCTCTGCGACTCTGCATCCCACTGTTGCTTCGGTCACTTGCTTCCTCGCCATGAATGCTTTCTGTACTCCTTGAGGTCCTCCGTACTTCTGTAACGCCGTTAGGGATAACGACAATTCAAAGTTATGAAGCTGGTTATGTTCTGCTCCTTGACCGATTGGAGCTCTTGTGTCTATTAGCTTTCCTGCCTCTGCAGCTGCTTCTAAAGCTGCTTCTGTCGCTTCAACACCTGCTCCTACATCTGCGCCATTGGTCTCAACTGCTGCTGCAACCGCTGTCTCGTTCTCTTCTCCGTCTTTCCCCTTGTTTTTCCCGTTGTAGTAGTTCGATGATCGGGTCCATCTCCTTGAAAACGGATCATACCCAGCTTCACCGGCTTTGAGACTAGCGCTTATAGATTTTACCTCAGATGCGTTCTTGAAATTCTCGGCTCTGTTCTTCTTGTTCATCTCGGCAAGTTTAAGCGCTTTCTTATCTACCCCTTTCTTGTTCCGTGAAGCGTCGAGCTGTTTGATTTTAGTTTTGATCCTCTCTACACCTGCTTCATCGTTTTTGCTCTGCGCAATTTCCAACTCTTTTCTAAGCCGATCTTTCTCGGCCGCAACATTCATTGGCCTGACCGAGGCGGATTTTTTCTCCTGCAACATCTGTTTGACAGTTTCCGCAGAGTAAACGAAACTGTTTATTCTTTGGATCGCTTCTTTCTTCTCCGATATATCTTGCTTTGTGGGCATGCGACCATTTGTTCGCTCAACCTCTCTGATCCATTGCCTATACTCTTCCTCCAGCGGATGACCATCTGAGATCATAGCCATTTGCCATCGAGCCGCCGAGGTTTCATTTCCCCAGACGACGTTAAGGTACTTGTGTGTAGTTTTATTCTCTAGCTTGTAAGTCTTGTCTGGATCGGTTGCATCTACATTCTTCACCCAGCAGAGTCTGTAAATTGGACCACTCTTTGACCTTCCGATCCCAACCCTCACAAAGCACCCAACTATAAGCTCTTCAAAGAAAGGCTCCATTAGCCATTTGGCAAGCTTAGACCGTCTGATGGTAATTTCCTTAACATCCTCAAACGTAGGCACATCTGACCTGTCATCATCACTGTCTAGCATTCCTGCATTCGAGCCTTCATCATCACTCTGAGACCTACTATCACTGTCACTTTGGCTGGAGCTACTCAAATTGGAGGAAGCTAACGGTTTCCTCTTCATTGATGAGAAATCTCGACTCCCTGAACCACCTTTTGATGCATCTCTCAGTTTCCTGAGAGCAGCTGGGTCCTGCTGCTTCATACGCTTTGCCCTCAATTCGTTCAGGGCATCATCCTTAGCAGCGGCTCTGTCTGCAGATCTAGCAGATGAACGCACACCACGAGAGGCCGGAAGAGGCTGGGTCTCCTTTTTAGAAACAGGGGTTTTCTCATTTTCTCTCTTGGACCTAAGTTTCTCAGTGAAGTTCTTATCACCTTTCTTATCAGCACGTTCAGCCAGAATCATCTCTCTCTGAAACTCTGTCATTCCAGCAAGCTTCTGCCGGTCTTCCTCATTCTTGTAAAGGTCATCCCCAAAATCAGACTCCTCGCTGCTGTCACCTTCACGATCAGATGGTCCATCACCATAACCACCTTCAACTCGAGCAGCTCGATCTTCTCTCTCTGCCTCCAATCTCTTCTTCAAAGGTACTTGAGACCCAGACGGTTTCCTACTAGCATAGCCGCGATCTTCATCAGAATCATCCCTTGAATCGCTACTACCATCAGAGTAAGAACCCTCACGTCTCCTCGATGATGGAGGATGGCGACTCCTCCCTGCTGAATTTGTTCTCCCAGCAGCTTCCAAAAGCAAATTCTCTAAATCACCCATAGCATCAAAGGAAGCTCACAAACGAGAGTTTCTTCAACGAATTTAAATGGTTCTCACTATCACCTGAAAATGATTACAAATTCACAGTTAGAGCAGCAAAAACCATATTTTAAATTCTAACCCTAGAGAAGCCATTATTAGGGTTATGGACAACTTTTTCCCCCAATTAAGCTCCTTGTTATGGAGAGATTAGATAGATAAGCATCATCATCCCTAACTAATTTTCCCTTTCATTCCCCAAAAAAGCTGCAGATAGGACTCATGTTCTGCTTGTTTCATCAGAAGACTAACCAATTGGTGTAATCGTGAATCAGGTAACGGTGAGGTCAAAAGCCAAATCGCGGTTTTGCAAAAACCTATCCGAGTTTCTGAGGTTAATCTAGTGAATTTAGAGACGAAAACGATTGATTTCTGGTATGGATCTTAAATTCGATTTGAAGAGGTAAGGACGGCGGAAATAGGGAACCCCAGAAGCCGTTTGAGGCGGAGAAAAGGAAATAGAGAGAGCAAGGGGTAAAAAGAAGAAGAGAAAAGTACAAGGAAACTCACTTGAGATGAGACGGAGAAATCGCAGGAAAGTGTTGCAGAGATCGACGACGGGCGGCTAATGGAGGAGAAGGAAAGGAACGAGTAATGTCGAATTGTCGAGAGGAAGCTGATGATGAA
CDS Sequence
- >fgenesh2_kg.2__351__AT1G61040.1
ATGGGTGATTTAGAGAATTTGCTTTTGGAAGCTGCTGGGAGAACAAATTCAGCAGGGAGGAGTCGCCATCCTCCATCATCGAGGAGACGTGAGGGTTCTTACTCTGATGGTAGTAGCGATTCAAGGGATGATTCTGATGAAGATCGCGGCTATGCTAGTAGGAAACCGTCTGGGTCTCAAGTACCTTTGAAGAAGAGATTGGAGGCAGAGAGAGAAGATCGAGCTGCTCGAGTTGAAGGTGGTTATGGTGATGGACCATCTGATCGTGAAGGTGACAGCAGCGAGGAGTCTGATTTTGGGGATGACCTTTACAAGAATGAGGAAGACCGGCAGAAGCTTGCTGGAATGACAGAGTTTCAGAGAGAGATGATTCTGGCTGAACGTGCTGATAAGAAAGGTGATAAGAACTTCACTGAGAAACTTAGGTCCAAGAGAGAAAATGAGAAAACCCCTGTTTCTAAAAAGGAGACCCAGCCTCTTCCGGCCTCTCGTGGTGTGCGTTCATCTGCTAGATCTGCAGACAGAGCCGCTGCTAAGGATGATGCCCTGAACGAATTGAGGGCAAAGCGTATGAAGCAGCAGGACCCAGCTGCTCTCAGGAAACTGAGAGATGCATCAAAAGGTGGTTCAGGGAGTCGAGATTTCTCATCAATGAAGAGGAAACCGTTAGCTTCCTCCAATTTGAGTAGCTCCAGCCAAAGTGACAGTGATAGTAGGTCTCAGAGTGATGATGAAGGCTCGAATGCAGGAATGCTAGACAGTGATGATGACAGGTCAGATGTGCCTACGTTTGAGGATGTTAAGGAAATTACCATCAGACGGTCTAAGCTTGCCAAATGGCTAATGGAGCCTTTCTTTGAAGAGCTTATAGTTGGGTGCTTTGTGAGGGTTGGGATCGGAAGGTCAAAGAGTGGTCCAATTTACAGACTCTGCTGGGTGAAGAATGTAGATGCAACCGATCCAGACAAGACTTACAAGCTAGAGAATAAAACTACACACAAGTACCTTAACGTCGTCTGGGGAAATGAAACCTCGGCGGCTCGATGGCAAATGGCTATGATCTCAGATGGTCATCCGCTGGAGGAAGAGTATAGGCAATGGATCAGAGAGGTTGAGCGAACAAATGGTCGCATGCCCACAAAGCAAGATATATCGGAGAAGAAAGAAGCGATCCAAAGAATAAACAGTTTCGTTTACTCTGCGGAAACTGTCAAACAGATGTTGCAGGAGAAAAAATCCGCCTCGGTCAGGCCAATGAATGTTGCGGCCGAGAAAGATCGGCTTAGAAAAGAGTTGGAAATTGCGCAGAGCAAAAACGATGAAGCAGGTGTAGAGAGGATCAAAACTAAAATCAAACAGCTCGACGCTTCACGGAACAAGAAAGGGGTAGATAAGAAAGCGCTTAAACTTGCCGAGATGAACAAGAAGAACAGAGCCGAGAATTTCAAGAACGCATCTGAGGTAAAATCTATAAGCGCTAGTCTCAAAGCCGGTGAAGCTGGGTATGATCCGTTTTCAAGGAGATGGACCCGATCATCGAACTACTACAACGGGAAAAACAAGGGGAAAGACGGAGAAGAGAACGAGACAGCGGTTGCAGCAGCAGTTGAGACCAATGGCGCAGATGTAGGAGCAGGTGTTGAAGCGACAGAAGCAGCTTTAGAAGCAGCTGCAGAGGCAGGAAAGCTAATAGACACAAGAGCTCCAATCGGTCAAGGAGCAGAACATAACCAGCTTCATAACTTTGAATTGTCGTTATCCCTAACGGCGTTACAGAAGTACGGAGGACCTCAAGGAGTACAGAAAGCATTCATGGCGAGGAAGCAAGTGACCGAAGCAACAGTGGGATGCAGAGTCGCAGAGAACGATGGCAAGAGACATGGCCTTACTTTAACTGTTAGTGATTACAAGAGAAGGAGAGGTCTTCTCTGA
Protein Sequence
- >fgenesh2_kg.2__351__AT1G61040.1
MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRGYASRKPSGSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMTEFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAAAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDSDSRSQSDDEGSNAGMLDSDDDRSDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRNKKGVDKKALKLAEMNKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENETAVAAAVETNGADVGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL