Information report for fgenesh2_kg.2__2428__AT1G79730.1
Gene Details
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Functional Annotation
- Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5’] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.
Homologous
- Actinidia chinensis: CEY00_Acc12681
- Brassica napus: BnaA10G0296300ZS, BnaC09G0616900ZS
- Brassica oleracea: Bo9g183540
- Brassica rapa: Bra009582
- Citrullus lanatus: Cla97C09G162100
- Cucumis melo: MELO3C024438
- Cucumis sativus: CsGy7G021580
- Glycine max: Glyma.07G015500
- Gossypium hirsutum: Gohir.A09G081200, Gohir.D03G057900, Gohir.D09G081300, Gohir.A02G117400
- Manihot esculenta: MANES_11G033700
- Populus trichocarpa: POPTR_003G048900v3
- Prunus persica: PRUPE_1G178600
- Rosa chinensis: RchiOBHm_Chr2g0140531
- Vitis vinifera: VIT_09s0002g03510
Gene Resources
- Pfam: PF03985
- UniProt: D7KXQ1
- EMBL: GL348714
- AlphaFoldDB: D7KXQ1
- KEGG: aly:9323925
- InterPro: IPR007133
- PANTHER: PTHR23188 , PTHR23188:SF12
- OrthoDB: D7KXQ1
- eggNOG: KOG2478
- STRING: 81972.D7KXQ1
- HOGENOM: CLU_027299_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.2__2428__AT1G79730.1
AGTACACCGAGAATGGCGTCGTACAGGCCGCCGTATCCTCCTCAAAATCCTTTGGCCCCTCCGCCTCCTCCGCCGTCTTTACCCCCTCCTGTTCCTCCCCCACCACCGTCGCATCAACCGTACTCTTATCCTCCGCCGCCTCCCCCTCCGCATGCTTACTATCAGCAGTATCCTCAATTCAACCAGGTCCAAGCTCCTCCTCCTCCACCTCCACCTCCCTCAGCTCCTCCTCCCCTCGTACCCGATCCTCCTCGAAATCAAGGGCCCAATGACCGCGACAAAGGGGCCTCGAGGCGGGAGCGTGCTAAACCGGATCCATCGAAGCACCACAGGTCTCATCTTCCCCATACTAAGAAAATCGAGACCGAAGAAGAGAGGAGGCTTAGGAAGAAGAAGGAGTTAGAGAAACAAAGGCAAGAAGAAAAACTTAGACAGCAGATGAAAAATTCTCACAAGTCTCAGATGCCCAAGGGACACACGGAGGAGAAGAAGCCGACGCCTCTACTCACCACCGACAGGGTCGAGAATAGGTTAAAGAAACCAACCACCTTCATCTGCAAGCTCAAGTCAGTATTCTCACTTCTAGCAAACGACTAACTACATCGTGTTTACATATTAGACTGATAATCATCTTCTTGAAGGTTCCGGAATGAGCTCCCTGACCCTAGTGCTCAGCTTAAGCTTATGACCATTAAGCGGGATAAAGATCAGTATGTTACTCTATTGCCAAAAAGATCTTCCAGTTTTATTTCTTGACTCCGTTTTACTTCTTAAATCTGATACAGCTATTTGATCCGACCACTAGATTTACAAAGTATACCATCACATCGCTGGAGAAATTATGGAAACCAAAAATCTTTGTCGAGCCTGATCTTGGAATACCCTTGGATCTGCTTGACCTAAGTGTATACAAGTATGATCTCTCAATAAAGTTTGACTGTCTTTAATGCGAGAGACCTCATCTACTCGGATACTTACTAATGTAGCTCTTTTCTTTCAGCCCTCCCAAATTCAAGGCACCTCTTGCCCCTGAAGATGAAGAACTGCTGCGTGATGATGATGCTATTACACCTATTAAGAAAGATGGCATCCGGAGAAAAGAAAGGCCAACTGATAAAGGTGTTTCCTGGCTCGTGAAAACACAATACATTTCTTCTATTAATAATGAATCGGCAAGACAGGTATCAATCTCACTTGTTGAAAGTTTCTTTTGTTATTTATAGCTTGTGAAAGCAGTTTCCAATCTTATATGTTCTCCATGTGTAGTCGCTAACTGAGAAACAAGCAAAGGAACTGCGAGAGATGAAAGGAGGCATCAACATCTTGCACAATCTTAACAATAGGTGTGTTATTTCTCAAATTTGTGTATTTCTAAACAAAGTGAAAAAAGAAGGTCTAATGGTTTCTTTTTCTTTGGTCTCTAGAGAGAGACAAATCAAGGATATTGAAGCATCCTTTGAAGCATGCAAGTCTCGACCAGTTCATGCCACCAATAAAAGCTTGCAGCCGGTTGAAGTTTTACCACTGTTGCCATATTTTGATAGGTTGATTGCTCCTTATTTTCCCTTTGAGACAATCTTAAATCTTAAATCCCGAATCAGGCAATTTTTTCTCATAATAGCCCTGCATGTAGACACAACAATGAAGCCCTTGAAAGCTGACACTTTACGGTATTATCTGTATGTTGGCTTTCTGTGAAGGATCTCCTGTGGTGGTAAACATGCGCTTATAGTTTTCCAGTTGCTATAGAATAATGTAATCAACCAGATGGGAAAGCCAGCCATTAAAGTCTAACTATTCAACATTTAAGAGATGTTGGTCTTTATTTTTTCCCCTTTTCTCTGCTCCATGTCTTGTTCAAATGTTTCTTTGCAAGAGTTTTAGTGCATTGCCTTTTGGATGAAAAATCACTAATAGTTTTCAACTTGTAGCATATTATGCTAATATATTTGTCTCTTCCCTTCTTTTTTCGATACAGGTACGATGAGCAGTTTGTGGTAGCGAATTTTGATAGTGCTCCTACAGCTGATTCTGAATTCTTTGGCAAGCTAGACCCATCAATTCGTGATGAACATGAGTCACGGGTGAGTTATGAGTTACTCATATCCGTGAGCATGGCCCAATTATCTCTGTTCTCTAGTATATGAATACTTTGTTCCTTAGAGGCAAGATGACTGTATAAACTATATCGCTTTTGTTACCGACAAAAGTGTACTCGAATGAGGATGGGATATATGAGATATGGGGCCTAATCTTAAATATGGTTGATTGCCTTATTTTCATATCGATGACGAGCTCTGACCTCATACTCACAGGCCATTTTGAAAAGCTATGTGGTGGCTGGATCAGACACTGCCAATCCAGAAAAATTTCTGGCGTACATGGTTCCTTCGTTGGATGAGGTAGTCATGCCTCTGTCTCCACGAACTGATCTCTGTTATAAACTTTTGTTAAATATGTATGTTGCTGTGCCAGTTGTCTAAGGATATGCATGATGAAGACGAAGATATCTCTTACACTTGGGTTCGCGAATACCACTGGGATGTATGTACCGTAGCCAATGTGGTTTGAGTGAAATTTTGATTGTTTTGAGTTGCAGATTGAAATAAATATGTTACCTGATGTTATAACAGGTACGTGGTGATGATGCAAATGATATTGGCACATACCTGGTATCGTTTGATGATGGGGCCGCTAGCTATCTGGTATGCCGTAGACAATACCTGCATCGCTTTTTGTATCTTTTTGTTACATATTTCAGTTGTGTATCTTTGTCTCTGTCTATAATACTTTGGGATGACCCACCCTTGAGAATTTGGCAGCCCCTACCCACGAAGCTGAACTTGAGGAAGAAAAGGCCCAGGGAAGGAAGATCTTCTGATGAGATTGAACACTTTCCAGTACCTTCAAGGGTGACTGTAAGGCGAAGATCAACTGTATCAGTGATCGAACATAAAGATTCAGGGGTATAGTAAATCCATACATTTAGCCTTTAAAAAGAGTAATACAAGAAGTATGTGGAAAGTTCTTGTTCTCTTACCAATTCCTTTGGACTTTGGGGCTTTGGATGTAGGTTTACTCTTCTAGGGTTGGTGCTTCGAGCTCCAAGATGAGAAGATTAGAGGACGAAGAAGGCCTTGGTAGATCTTGGAAACATGAGCCGGAACAAGATGCCAATCAATATAGTGATGGTAATGAGGATGATTATTCTGAATGAACGTTTTATGTACTTCAAACTATTCAATCGGTTTTCCAATGGTGTGTGAAGTATCCTGCAAGGCTACTTTTAGGCTAATTTAAAGCGTAATATGGCCTCGACCAGAGCCTCGTAATTTGGCAAGTAAAGAAATATTGATTTGGATAGCTGGCGAAGCTGAAAAACGATTTGACATGTACACGTCCAT
CDS Sequence
- >fgenesh2_kg.2__2428__AT1G79730.1
ATGGCGTCGTACAGGCCGCCGTATCCTCCTCAAAATCCTTTGGCCCCTCCGCCTCCTCCGCCGTCTTTACCCCCTCCTGTTCCTCCCCCACCACCGTCGCATCAACCGTACTCTTATCCTCCGCCGCCTCCCCCTCCGCATGCTTACTATCAGCAGTATCCTCAATTCAACCAGGTCCAAGCTCCTCCTCCTCCACCTCCACCTCCCTCAGCTCCTCCTCCCCTCGTACCCGATCCTCCTCGAAATCAAGGGCCCAATGACCGCGACAAAGGGGCCTCGAGGCGGGAGCGTGCTAAACCGGATCCATCGAAGCACCACAGGTCTCATCTTCCCCATACTAAGAAAATCGAGACCGAAGAAGAGAGGAGGCTTAGGAAGAAGAAGGAGTTAGAGAAACAAAGGCAAGAAGAAAAACTTAGACAGCAGATGAAAAATTCTCACAAGTCTCAGATGCCCAAGGGACACACGGAGGAGAAGAAGCCGACGCCTCTACTCACCACCGACAGGGTCGAGAATAGGTTAAAGAAACCAACCACCTTCATCTGCAAGCTCAAGTTCCGGAATGAGCTCCCTGACCCTAGTGCTCAGCTTAAGCTTATGACCATTAAGCGGGATAAAGATCAATTTACAAAGTATACCATCACATCGCTGGAGAAATTATGGAAACCAAAAATCTTTGTCGAGCCTGATCTTGGAATACCCTTGGATCTGCTTGACCTAAGTGTATACAACCCTCCCAAATTCAAGGCACCTCTTGCCCCTGAAGATGAAGAACTGCTGCGTGATGATGATGCTATTACACCTATTAAGAAAGATGGCATCCGGAGAAAAGAAAGGCCAACTGATAAAGGTGTTTCCTGGCTCGTGAAAACACAATACATTTCTTCTATTAATAATGAATCGGCAAGACAGTCGCTAACTGAGAAACAAGCAAAGGAACTGCGAGAGATGAAAGGAGGCATCAACATCTTGCACAATCTTAACAATAGAGAGAGACAAATCAAGGATATTGAAGCATCCTTTGAAGCATGCAAGTCTCGACCAGTTCATGCCACCAATAAAAGCTTGCAGCCGGTTGAAGTTTTACCACTGTTGCCATATTTTGATAGGTACGATGAGCAGTTTGTGGTAGCGAATTTTGATAGTGCTCCTACAGCTGATTCTGAATTCTTTGGCAAGCTAGACCCATCAATTCGTGATGAACATGAGTCACGGGCCATTTTGAAAAGCTATGTGGTGGCTGGATCAGACACTGCCAATCCAGAAAAATTTCTGGCGTACATGGTTCCTTCGTTGGATGAGTTGTCTAAGGATATGCATGATGAAGACGAAGATATCTCTTACACTTGGGTTCGCGAATACCACTGGGATGTACGTGGTGATGATGCAAATGATATTGGCACATACCTGGTATCGTTTGATGATGGGGCCGCTAGCTATCTGCCCCTACCCACGAAGCTGAACTTGAGGAAGAAAAGGCCCAGGGAAGGAAGATCTTCTGATGAGATTGAACACTTTCCAGTACCTTCAAGGGTGACTGTAAGGCGAAGATCAACTGTATCAGTGATCGAACATAAAGATTCAGGGGTTTACTCTTCTAGGGTTGGTGCTTCGAGCTCCAAGATGAGAAGATTAGAGGACGAAGAAGGCCTTGGTAGATCTTGGAAACATGAGCCGGAACAAGATGCCAATCAATATAGTGATGGTAATGAGGATGATTATTCTGAATGA
Protein Sequence
- >fgenesh2_kg.2__2428__AT1G79730.1
MASYRPPYPPQNPLAPPPPPPSLPPPVPPPPPSHQPYSYPPPPPPPHAYYQQYPQFNQVQAPPPPPPPPSAPPPLVPDPPRNQGPNDRDKGASRRERAKPDPSKHHRSHLPHTKKIETEEERRLRKKKELEKQRQEEKLRQQMKNSHKSQMPKGHTEEKKPTPLLTTDRVENRLKKPTTFICKLKFRNELPDPSAQLKLMTIKRDKDQFTKYTITSLEKLWKPKIFVEPDLGIPLDLLDLSVYNPPKFKAPLAPEDEELLRDDDAITPIKKDGIRRKERPTDKGVSWLVKTQYISSINNESARQSLTEKQAKELREMKGGINILHNLNNRERQIKDIEASFEACKSRPVHATNKSLQPVEVLPLLPYFDRYDEQFVVANFDSAPTADSEFFGKLDPSIRDEHESRAILKSYVVAGSDTANPEKFLAYMVPSLDELSKDMHDEDEDISYTWVREYHWDVRGDDANDIGTYLVSFDDGAASYLPLPTKLNLRKKRPREGRSSDEIEHFPVPSRVTVRRRSTVSVIEHKDSGVYSSRVGASSSKMRRLEDEEGLGRSWKHEPEQDANQYSDGNEDDYSE