Information report for fgenesh2_kg.1__4503__AT1G54170.1
Gene Details
|
|
Functional Annotation
- ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins.
Homologous
- Actinidia chinensis: Achn330611
- Brassica napus: BnaA06G0007300ZS, BnaC06G0084500ZS, BnaA05G0156200ZS, BnaC06G0136800ZS, BnaC03G0805000ZS
- Brassica oleracea: Bo6g033090, Bo6g050990
- Brassica rapa: Bra037969, Bra014367
- Malus domestica: MDP0000434309
- Raphanus raphanistrum: RrC2757_p1
- Solanum melongena: Sme2.5_00007.1_g00031.1
Gene Resources
- Pfam: PF06741 PF07145 PF14438
- UniProt: D7KLF4
- RefSeq: XP_002894481.1
- EMBL: GL348713
- AlphaFoldDB: D7KLF4
- InterPro: IPR009604 , IPR009818 , IPR010920 , IPR025852 , IPR045117 , IPR047575
- PANTHER: PTHR12854 , PTHR12854:SF7
- SUPFAM: SSF50182
- PROSITE: PS52002
- Gene3D: 2.30.30.100
- OrthoDB: D7KLF4
- CDD: cd00600
- eggNOG: KOG2375
- STRING: 81972.D7KLF4
- HOGENOM: CLU_022637_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__4503__AT1G54170.1
AAGATTTAACGTTAAAAGTTTGAATGGAGAGACACAAGTGAATAAAGAAATGAGATCAGCAAGAATCTAATGTAAAATCTAGTCTAATACCTAAACAAACTAGATCACCATCACATCAAATTGTGTTCAATTTTTCTCACAAGGACCATCACACCATTCATCATTTTATAAACTAAAAATAATTAAATAAAAATGAAAAGATTCGGTGCTTGAAATAAATAAAATAAAGTAAATTAAATGAAACCAATTCCATCAGAATATTCGAGACCTTCCCTTGTGCCAGCCACCACCAGTCATGGTTTTGGCCAAAAGCTAATAAGAGTCTCTTCCATTGTATGGCATCTCCTGCCATAAAATCAAAGGTTGTCAGCAAAATCTAACTCTTTTGAGCAATTTTTTTTGTAAAAAGACAAAGCAAGAATTATGAGGAAAGTAGTAACCGGTTGATATGGCGTTGGCGGCATGAACAAGACCGGTCTCTGTTGAGTAATCATCATCTGTTGTGGGTACTGTTAACATTGATTCCACATTTCAGTCTTTCAATAGAGAGAATGGGTTAAGAGTTTTAACGTCATGGCTCTTATAAGCAAACCTGTGGACTATTTGGAGAATAATATGTTTGATTTGGACTAAGCTGTGTTGTGTTATTATACATCATTGGGTGTTGCTGTCCAGGGAATGCTCCTCCCATCTGTCAATTTTCAACTTTGTGAATCAGAAACATAGCTTAACAGATATTAAAGCTTGATTTAGATCATTAGATTAAGAATAAAGAAAAGTTACTCCGTATCGAATACGTAGTCCTGGCATGGGTGGAACAGGAGGATAATAGAATGATCCGTCTGGGACTGGAGATTGAGGACTTTTAGCTGATGGAGAAGATGGTTTGAAACTCTTTGCGTTGGGGTTCAGTTTAAATTCCTGATCAGACCTAAAGCCCGTTAGTAAAAGCTTACAGTATTAAGGAGAAATTAGATGATAAACCTAAGCACCGCGAAAAAACCTTCGCATTTGGGTTGAGTGTGGATTTTTCTGATGATAAAGAACCAATTGAAGAGCTTGGTGATAGTATTGGACGATTTGATGCTGAGGAAGCTGCATAGTTTTCTGAATTTCTAGAAATGGAGCTTCCAGGCCACCCAGAAGAGCTCTCAGATTTCGCTCTGTCAGAGAGTAGACCGACTCTTCCATCAGTGAAACTTGGCTTCTCAGATGGTGGTGCATCTTCATTGAGGTAGCAATTAAATACATAGTTGGAAATTCAATTGGTATCAACATTTAAGATGAAACAGGAGTAGATAGATACGATAAGCTGAAGTTACACATACCTTCAAGACCAGACACTGATTCCTCAGATGGCTGTGTTACAGATTGAAGCCAGTAGAACAAAGTTATATGTAATGTTCCATTATGCAAATGCAATCAAGACTAGATGCGTAGTTTAGCTTTTTTACCTTTTTATAAAGGGAAGACCCTAGGAATTTGCTCTTTCTTTGCTCACCAAGCTGGCTCTCATTCCTATCAGAATGAGTTTCAGAAACATAACGTTAAATGAAAGATATTTTGAACAAAAAATGTATATTCCAAGGAAAAGACCTGATTTTGTTTCCTGCAACAGGAAAATCTTTGGATGGCTGTTCGGACATAAGCTGGTGCGAATGCTTATTTGAGTTCGACCAGCTCTGGTCTACAATTTTGTTATTCCGTAAATGCAGGCTGTCACCCTGAAGGACAAAAAATGGCAATATCACCGATGATTCTCCTAGAAACTACTACCAGTGAAGAACTCAACCATACCCATGTTTCTTCATAGACCATGCCAGTTGAAGCAGGTTTCTTGCCATCAGAAGCAGAAGAGTCACCAAATGTCAAATTGTTGCAGCAATCCAACAATATGTCTTCTTCTTCGTCTTCGTCTTCATAACATGTATCATCAAATCTATTAGCCGTACAGACCGATGAGTATTTGGTTTCCTCATCAATATCAAACTTTCCACTAAGCTGGAGCCCTCTTTCCTGTGTAAGATGATTGCATGCATGAACCATTAGAAGTTAGATATGATACAACAATGAAACGTAAAAATTCAAGAGTCCCATAAGATATCCGTAATTCACCTCTGCTACGTGAAGATCTCGGGTATTCTCACCCACAATCTCTCTCGCAATCCTCAAGGCTTGCTCTTCTAGCTCCCTCGTTCCAGGACCTCTCTCAAGTTTTGTGGTATACAATTCCTCATCAAAAGTGCTTGTTACTCCAAATAATGACTTATTGACCTCAAACTGATTCCAGCCCCTACGATATCATCACATATAAGATATGTTGAGAGGTGTCCTTCAACCCAGGAAGTGTACATGATGAAAAGTGCTCACTGCAGACAGAGGTCTCAAACTAACCCACATGAAATTATCAATATATGTAACAGCTTTTTTATATTCAATTTACTAAGTAAAATGATATTTATTTTGAAAATTAAATGTATTCTAGTATATTTCTATTTGATTATGTGTAAAAATTAATTATAAAATAAAGAAAATTGAAAACTTTGGAAACGGCAGGCCTACTCTAACAATCTGTAATAATATGGCGGGTGAGTTAGGATATCTAAGCATTAGCGGCCCACCCCACCAAAACCCTGTATTGGTTTAACCAACTGCAGGGCGGCTTAGCCTGCTTTGACATCTTAACCAAGCAATAAGAGGAATTGAACTGGGATCAATAAATATATGGCTACCTGTTGAAGTTAAAATCACGAACATGAATAAAAATCAAAACTCTCATTATTAAAAAGGAATCATAGTAACAAGAACAGAAATCGAAAAACTATGATGTCTGCCTCAGCCTAACCCGATACAACCTCCAAAGCACTCTCTAACTTAGATCATAAAAGTAAACACTCTGAGGGAAACGAAATAGAGAAAACAGTTTCTAAATCAGAAAATAGAAATCCTAACAAAAAGGTAAATATCCTACGTTAATGAATAGCATCACTACCTCTTCCAAGGATCATCAAACACATTCTCCAGATCTGAACAGTCTGGAACATCTTCATCAGGTACCCAAGGTTTCAGCTCTCTCTCCAAATCAACATTATAAAACTGTGATATCAGAGAGTCTGTCAACAGCTCTAAAGGCTTCTCGCACTGAACAGAATCTGAGCCGTTATGGCTGGATACAGGAAGGTCCTAACACAGAGACCAATGGCAAAAGAATAACAATGTCAAAACACCAAGAAGTCTTTCTAACATGCTGGTGCACTGACATGAACATAAAAACCCAATCCCATTAGCAAGAAAAGAGTACACACCTTAGCTATAACTTGCACAACTTCGTCAGCAGGGATAATGAGTATCTTTGAAGGTGGCTTGCTGACAAGCGGAGAACGGGATTTGGTTCCTCGTGAATCCCTCATTAAACATGCCATTTTCAAAATAATTCCTGAAAGTTTCAAAGAGTTTGTAAGTGATAAAAAAACAAAGTTACCGCTTCTTGTATTATATTACATCTTAAAGGGACAAACAGGTTACCAAAATCCTTCTCCACATCAGCAGCATGAAATATGCCACTGTAAACTGATCCATTTTTGAGATGAACTTCTACCTGATGTCCAATATTACAAGTTGTGAAATACACCAACAGCTTGTGAGAAGGGGTATCCACACTTCCAGCTTCCCAACCGTTTTCTTCACATATATATCAACAAACAAGAGAATGAAGAACATGATGCTGGTGCTACATCAGAATAAAGATATACATGTTATAAATATATATACAAAACCTGTAGTGCCCGCAGAAGGCTGTGCGTTATTCATCCCAGCCTCTTTTTCAACTCTTCTGTGTGAAAATCCATTGGATGAAGAGCCCGAGTGAAGAACAGGCTTCATAGTTGCTTTAACCTGTTGAAGTGAAAAAAGTATAAGAATTTATCGATAAACCGAATATTCAATAAGATGATAAATATAACTGTATAAAATACACTTAATTTCATGTTTTATTTTGCCAGGTCTCACGGGACGATGAGCCTGATATGCAAACTGGCCTCCAATTCGCATTCATGCTGGCATCAAAACTTTCTTTTAATATTTCTAAATGTGATGTAACTGTGATATTTGTTTTAGATAGAATGTCACAGTCAATTTCATACATCGATCTACTTAAATAAAACCATATTACTAGGGGTTCATCAACTAAACCCTATACAGAGAAGTAACGTGAATGTTCTGAAACGATAAAGTAACTCCGATTGTGAGCCATGGGAACAACAACCAAAAACTGCCCATAACATGTAAATTGCTAGCCAATTTTCCAGCACAAATATCCAGATTGTAGGCATACGAAACGTGAAACTAGAAGATTGGTGTTCTATCTCCTGACCAAGCAGTTTAAAGGTTACATTGAACGTGAATCACTATTACGAAAGACACAAACTTGCGCAGGCTTCATACATCAAATCAAACAACGAAAATCATAATCACAGCTCTAAAGAACAAATAACATGACAAACCAAAAAAGTCCAAATTTATATATTCTGTTGATGAAAAACGCAAAACCAAATTAAGAAAATGTATTAAAAGGGACCAAATAAGCAACAAGACAACGTTTTGCAATCCAAAGCTGAAATTTTTCAATACATAACGAATTTGTACTAGAAAGAGTACCAAAAGGAAACCCTAAATCAACCAACTCAATCACCAAAATCTCAAAATTTGAATCACAAATTTCCCAGAAAAAGTAAAGCTGAAGGCAATGAAATCAGAATCTGAAGATAGAAACCTGAGAAGATGATATTTACCTCAACAAAGCTGAAATCAACCAATGCTAAGAGGAAACGAGT
CDS Sequence
- >fgenesh2_kg.1__4503__AT1G54170.1
ATGAAGCCTGTTCTTCACTCGGGCTCTTCATCCAATGGATTTTCACACAGAAGAGTTGAAAAAGAGGCTGGGATGAATAACGCACAGCCTTCTGCGGGCACTACAGAAAACGGTTGGGAAGCTGGAAGTGTGGATACCCCTTCTCACAAGCTGTTGGTGTATTTCACAACTTGTAATATTGGACATCAGGTAGAAGTTCATCTCAAAAATGGATCAGTTTACAGTGGCATATTTCATGCTGCTGATGTGGAGAAGGATTTTGGAATTATTTTGAAAATGGCATGTTTAATGAGGGATTCACGAGGAACCAAATCCCGTTCTCCGCTTGTCAGCAAGCCACCTTCAAAGATACTCATTATCCCTGCTGACGAAGTTGTGCAAGTTATAGCTAAGGACCTTCCTGTATCCAGCCATAACGGCTCAGATTCTGTTCAGTGCGAGAAGCCTTTAGAGCTGTTGACAGACTCTCTGATATCACAGTTTTATAATGTTGATTTGGAGAGAGAGCTGAAACCTTGGGTACCTGATGAAGATGTTCCAGACTGTTCAGATCTGGAGAATGTGTTTGATGATCCTTGGAAGAGGGGCTGGAATCAGTTTGAGGTCAATAAGTCATTATTTGGAGTAACAAGCACTTTTGATGAGGAATTGTATACCACAAAACTTGAGAGAGGTCCTGGAACGAGGGAGCTAGAAGAGCAAGCCTTGAGGATTGCGAGAGAGATTGTGGGTGAGAATACCCGAGATCTTCACGTAGCAGAGGAAAGAGGGCTCCAGCTTAGTGGAAAGTTTGATATTGATGAGGAAACCAAATACTCATCGGTCTGTACGGCTAATAGATTTGATGATACATGTTATGAAGACGAAGACGAAGAAGAAGACATATTGTTGGATTGCTGCAACAATTTGACATTTGGTGACTCTTCTGCTTCTGATGGCAAGAAACCTGCTTCAACTGGCATGGTCTATGAAGAAACATGGGGTGACAGCCTGCATTTACGGAATAACAAAATTGTAGACCAGAGCTGGTCGAACTCAAATAAGCATTCGCACCAGCTTATGTCCGAACAGCCATCCAAAGATTTTCCTGTTGCAGGAAACAAAATCAGGAATGAGAGCCAGCTTGGTGAGCAAAGAAAGAGCAAATTCCTAGGGTCTTCCCTTTATAAAAAGCCATCTGAGGAATCAGTGTCTGGTCTTGAAGATGCACCACCATCTGAGAAGCCAAGTTTCACTGATGGAAGAGTCGGTCTACTCTCTGACAGAGCGAAATCTGAGAGCTCTTCTGGGTGGCCTGGAAGCTCCATTTCTAGAAATTCAGAAAACTATGCAGCTTCCTCAGCATCAAATCGTCCAATACTATCACCAAGCTCTTCAATTGGTTCTTTATCATCAGAAAAATCCACACTCAACCCAAATGCGAAGGAATTTAAACTGAACCCCAACGCAAAGAGTTTCAAACCATCTTCTCCATCAGCTAAAAGTCCTCAATCTCCAGTCCCAGACGGATCATTCTATTATCCTCCTGTTCCACCCATGCCAGGACTACGTATTCGATACGGAATGGGAGGAGCATTCCCTGGACAGCAACACCCAATGATGTATAATAACACAACACAGCTTAGTCCAAATCAAACATATTATTCTCCAAATAGTCCACAGTACCCACAACAGATGATGATTACTCAACAGAGACCGGTCTTGTTCATGCCGCCAACGCCATATCAACCGGAGATGCCATACAATGGAAGAGACTCTTATTAG
Protein Sequence
- >fgenesh2_kg.1__4503__AT1G54170.1
MKPVLHSGSSSNGFSHRRVEKEAGMNNAQPSAGTTENGWEAGSVDTPSHKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAADVEKDFGIILKMACLMRDSRGTKSRSPLVSKPPSKILIIPADEVVQVIAKDLPVSSHNGSDSVQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDPWKRGWNQFEVNKSLFGVTSTFDEELYTTKLERGPGTRELEEQALRIAREIVGENTRDLHVAEERGLQLSGKFDIDEETKYSSVCTANRFDDTCYEDEDEEEDILLDCCNNLTFGDSSASDGKKPASTGMVYEETWGDSLHLRNNKIVDQSWSNSNKHSHQLMSEQPSKDFPVAGNKIRNESQLGEQRKSKFLGSSLYKKPSEESVSGLEDAPPSEKPSFTDGRVGLLSDRAKSESSSGWPGSSISRNSENYAASSASNRPILSPSSSIGSLSSEKSTLNPNAKEFKLNPNAKSFKPSSPSAKSPQSPVPDGSFYYPPVPPMPGLRIRYGMGGAFPGQQHPMMYNNTTQLSPNQTYYSPNSPQYPQQMMITQQRPVLFMPPTPYQPEMPYNGRDSY