Information report for fgenesh2_kg.1__2745__AT1G26260.3
Gene Details
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Functional Annotation
- Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.
Homologous
- Arabidopsis thaliana: AT1G26260.3, AT1G26260.2, AT1G26260.1
- Brassica napus: GSBRNA2T00101994001
- Brassica oleracea: XP_013587861.1
Gene Resources
- Pfam: PF00010
- UniProt: D7KQS2
- RefSeq: XP_002893410.1
- EMBL: GL348713
- AlphaFoldDB: D7KQS2
- InterPro: IPR011598 , IPR024097 , IPR036638
- PANTHER: PTHR12565 , PTHR12565:SF444
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- CDD: cd18919
- eggNOG: ENOG502QT8I
- STRING: 81972.D7KQS2
- HOGENOM: CLU_819775_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__2745__AT1G26260.3
GTTGCCAAGTAGAGCTAAAAAGCTTAAGTACATAGCAAATCTTGATCCTTTTGAAGATTGTGATGGTCAGTCATATTACATCAACATTTCTCTTCCCTACATGGATTTATATGTACACAAAAGAAGCAGACAGTAGCTATTCAGTACACAACATTGTTGATTCTTACTCTCGACTCTTTCTCCCGGAGCTGTTAATATTAGAAAGACAAGATCTGCTTCCTCCTCTGTTTGTTTTTCATTCTTCTGTTCAAAGTTAATAAAATTCTCGACCGCAGCTACAGCTGAGTACAAAGTGAAGAAGAACCATCTACGGCTCCACCTTCTTGTCGGCTGTAAGATGAGATAAACACGAAAGGTTTAGCGGTTTTTAAGTATCTGGTTACAACAGTAGGAAAGTATAGGGCTTTTACTTTCACCTGTTGCGTCTTCATGATCAGGTGCAGTGCCCGTTTCATGGTTCATGTGGACAACATTGTGGTGATCACTTTCGTATCCATGTGTTTCCTGTTCAAAACTCACTAACAAGATCAGATGAATGCAAGAGAAAGAAATGATTCTGCAAAGATATGTGTATTGTTGGAGTATAACGTGCAGGCAAATATATGTACCTGCCGTTTTAATCCCCCATTCAATAGCGACATTGAGGAACGGTTGGGTTCCATGAATCCTGTTTGAGAGAGATATGATAGAGGAGGATAAAGCATCGACATGTTTTGGGGAAATGTCGGTGCAGATGATTGAAGAGCCTGCATGAATAGAAGACATCAACATCATATGAATGAAGCTGCTCATCAAATGATAAGAAAGAGAAGTCGATTCTCTGACAGGTTTCAAGAACATCTTACATCTTTTGCAAGGAGGCTTTCGAGGTTAAAATCGAGCACAGGATTCACAGCTGAAAGTTTCATCGATAAAAACTGAAATACATGGAAGAAGTAACTAACACAAAGTGAGGTTGCTAATTAGATGATGTGTCAAGAACAGACACTGTGAAAATAGGAAGTTCCAAGAGGAAACAAAAGATAAACCTCGATCTGGCATTGAAGTGATTGCACATAGTTAATAATTTCGTCGAGCATAACTGCCTTCCCAGTCACCTAAACAACAAATGCAATGTCCCATTTATATGAAAAGAAACAGCTTTAGATTCCATTCTTCTACATGTATGTACACATCAACAGCTAAAAATAAATGAACTTACCTTGTCGCAACCCGGTACAAGATCTTGCAAGAACTTCATCCTTTCACTGATTTTTTCTCTCCTTACCTACAATAAGAAGTTTTAACCAAATCATATACCACACCTAAACAAGAACCGAAAAGATTTGCTTTCTATTCAACTTCAAAAAAATATAATCCCTACTCTTTCTGCAAGACTGTGACTATTTGTAGCCTGGCCTCTCCGTGCCCTCATGTGAATATACCCATCCTTTAAAGAATCAGAAGCTTGTTTCTCACTGTTTGTCTTGTTAACATTTGAATTTGAACTTTGCTCATCCTTCTGCATTTTATCTTCTTCTCCTTCACAATCCTACCAACAGAAACACTATCAATCAGCGTAAGACCGAAAAAACACAAAATACAAAAAAAGAGTAGTGCAAATCCCTCTACCTTCCCAATTCTTTTCCTCTTCTTACTGTTAAACCCCTTGGAAGACGTTACCCCACATTTAGCATCATCATGACCATTACATCCACTAGATTGAGAATCCTCTGATACATTAATCGATCTGTCTTTCACCAACTTAGATGCATCCTTAAGAGAACCATTATCTAGTTTGGATCCACTAGGAATCATTGTATCTTGAAGAAACAAGCCAGCTGATTCTGGAACTCCAAGAGATGATTGTTGTTGGTTCATCACCATTTCACTTAAACTCCCACATCCAAAAAAAGAAAACTTTGCAGCACGCTCTATGAATCCTGAATCTGCAGGGAACTGAGCCATGTTCCAACCTATTTCAAGAGGTCTATGATCAGTATTATTATTACCTCTAAAGGAAGTGCCTGCATCTGTGTGGACATTGAAACCACCATCGTTCCAAAGAGTTTCTCTGAATGAATCCATCATCTGAGAAGGACCCGACATTGGATTCTCCGGAGGATACAAATCCACAGGCGTATTGACCAAATCCTTCTTCTTTGCGGCAAACTCGTCCAT
CDS Sequence
- >fgenesh2_kg.1__2745__AT1G26260.3
ATGGACGAGTTTGCCGCAAAGAAGAAGGATTTGGTCAATACGCCTGTGGATTTGTATCCTCCGGAGAATCCAATGTCGGGTCCTTCTCAGATGATGGATTCATTCAGAGAAACTCTTTGGAACGATGGTGGTTTCAATGTCCACACAGATGCAGGCACTTCCTTTAGAGAATCAGCTGGCTTGTTTCTTCAAGATACAATGATTCCTAGTGGATCCAAACTAGATAATGGTTCTCTTAAGGATGCATCTAAGTTGGTGAAAGACAGATCGATTAATGTATCAGAGGATTCTCAATCTAGTGGATGTAATGGTCATGATGATGCTAAATGTGGGGTAACGTCTTCCAAGGGGTTTAACAGTAAGAAGAGGAAAAGAATTGGGAAGGATTGTGAAGGAGAAGAAGATAAAATGCAGAAGGATGAGCAAAGTTCAAATTCAAATGTTAACAAGACAAACAGTGAGAAACAAGCTTCTGATTCTTTAAAGGATGGGTATATTCACATGAGGGCACGGAGAGGCCAGGCTACAAATAGTCACAGTCTTGCAGAAAGAGTAAGGAGAGAAAAAATCAGTGAAAGGATGAAGTTCTTGCAAGATCTTGTACCGGGTTGCGACAAGGTGACTGGGAAGGCAGTTATGCTCGACGAAATTATTAACTATGTGCAATCACTTCAATGCCAGATCGAGTTTTTATCGATGAAACTTTCAGCTGTGAATCCTGTGCTCGATTTTAACCTCGAAAGCCTCCTTGCAAAAGATGCTCTTCAATCATCTGCACCGACATTTCCCCAAAACATGTCGATGCTTTATCCTCCTCTATCATATCTCTCTCAAACAGGATTCATGGAACCCAACCGTTCCTCAATGTCGCTATTGAATGGGGGATTAAAACGGCAGGAAACACATGGATACGAAAGTGATCACCACAATGTTGTCCACATGAACCATGAAACGGGCACTGCACCTGATCATGAAGACGCAACAGGTGAAAGTAAAAGCCCTATACTTTCCTACTGTTGTAACCAGATACTTAAAAACCGCTAA
Protein Sequence
- >fgenesh2_kg.1__2745__AT1G26260.3
MDEFAAKKKDLVNTPVDLYPPENPMSGPSQMMDSFRETLWNDGGFNVHTDAGTSFRESAGLFLQDTMIPSGSKLDNGSLKDASKLVKDRSINVSEDSQSSGCNGHDDAKCGVTSSKGFNSKKRKRIGKDCEGEEDKMQKDEQSSNSNVNKTNSEKQASDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSSAPTFPQNMSMLYPPLSYLSQTGFMEPNRSSMSLLNGGLKRQETHGYESDHHNVVHMNHETGTAPDHEDATGESKSPILSYCCNQILKNR