Information report for fgenesh2_kg.1__2664__AT1G26830.1
Gene Details
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Functional Annotation
- Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.
Homologous
- Brassica napus: BnaA09G0444200ZS, BnaC05G0218500ZS, BnaA08G0231800ZS, BnaC08G0283300ZS
- Brassica oleracea: Bo5g045160, Bo8g076450
- Brassica rapa: Bra024680, Bra016291
- Gossypium hirsutum: Gohir.D04G192200, Gohir.A04G147900
- Manihot esculenta: MANES_05G100200, MANES_01G186700
- Populus trichocarpa: POPTR_008G148300v3, POPTR_010G093200v3
- Prunus avium: Pav_sc0000220.1_g1630.1.mk
- Prunus persica: PRUPE_1G272800
- Rosa chinensis: RchiOBHm_Chr4g0439991
Gene Resources
- Pfam: PF00888 PF10557
- UniProt: D7KPN4
- RefSeq: XP_002890627.1
- EMBL: GL348713
- AlphaFoldDB: D7KPN4
- InterPro: IPR001373 , IPR016158 , IPR016159 , IPR019559 , IPR036317 , IPR036388 , IPR036390 , IPR045093
- PANTHER: PTHR11932
- SUPFAM: SSF46785 , SSF74788 , SSF75632
- PROSITE: PS50069
- Gene3D: 1.10.10.10 , 1.20.1310.10 , 3.30.230.130
- OrthoDB: D7KPN4
- eggNOG: KOG2166
- STRING: 81972.D7KPN4
- HOGENOM: CLU_004747_7_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__2664__AT1G26830.1
CCTTCGAAATCTATCTTCTCCGATATCTCTATCTATATCTCTTCTTACACGCCGACGCTGCAAATATCCTTAAGCTTCTTTCTCCTTTCAACTTTTCGATTATTATTCCATTTCCTAACCTTTTTTTTCCCCCAAATCTATTATCGGAAGCAAAGAATACAATTCCAAACCCTAATCCGATCATCCGTCTTTCCTCTCCGGTCAGTCTTCCGATTTCCTCGATCCACCTGATTTTTGTTATGATTTTATATATACCTCCTTCTCGTTGTTGTGTTTTTGGAATTTAGATTGATTTGAGTCGATTTGCTTTGGATTCAGGTTTCAAAATATGAGTAATCAGAAGAAGAGGAATTTTCAGATAGAGGCGTTTAAGCATCGCGTCGTTGTAGATCCCAAATACGCTGATAAAACTTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTATAATCAAGATGCTAGCGGTCTCAGTTTCGAAGAACTTTACAGGTCTTTTCTTATATTCTCTTACCTTTCTTGTACAAATTGGTAATGATTCTGGAATCAATACTGGATTTGAGCTGTTGGTGTTAGTCTTTCTTTCATTCAGCTAGGTTTCGTGTTAATTTGGTTGTCTAAATTGAGTTATTGTGTATATTGGCTCAGAAATGCGTACAACATGGTCCTGCACAAGTTTGGTGAGAAGCTTTATACTGGGTTTATTGCTACTATGACTTCTCATCTCAAAGAAAAGTCCAAGCTTATCGAGGCAGCTCAAGGAGGGTCATTCCTTGAAGAGCTCAATAAGAAATGGAATGAGCACAACAAAGCGTTAGAGATGATTCGAGACATTCTCATGTATATGGATAGGACTTACATTGAGAGCACCAAAAAGACCCATGTTCATCCGATGGGGCTTAACTTGTGGAGGGATAATGTTGTGCATTTCACTAAGATACATACAAGACTTCTAAACACTCTTCTTGATCTAGTGCAGAAGGAACGGACTGGTGAAGTTATTGACAGGGGGTTGATGAGGAATGTGATTAAGATGTTTATGGACTTGGGTGAATCTGTGTATCAGGAGGATTTTGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTTATAAGGTTGAGTCTCAGGAGTTTATTGAATCTTGTGATTGTGGGGATTACCTAAAGAAAGCAGAGAAACGCCTTACTGAAGAAATAGAGAGGGTAGCACACTACTTGGATGCCAAGAGCGAAGAGAAGATTACTAGTGTGGTTGAGAAAGAGATGATTGCCAACCACATGCAGAGACTGGTTCACATGGAGAACTCAGGTCTGGTTAATATGCTTCTGAATGACAAGTATGATGATTTGGGCAGAATGTACAACTTGTTTCGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTATGACTTCTCATCTTAGGGAGATGGGAAAACAACTGGTTACTGATCCGGAAAAGTCAAAGGATCCGGTGGAATTTGTACAGCGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCAGCACCGCATTTGGCAATGATAAAACCTTTCAGAATGCGCTGAATTCTTCATTTGAGTATTTCATCAACTTGAATGCTCGTTCTCCTGAGTTCATCTCACTGTTTGTTGATGACAAGCTACGGAAAGGACTTAAGGGTATCGCCGATGTGGATGTGGAGGTTATCCTTGATAAAGTTATGATGCTATTCCGTTATTTACAAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGGCTAAAAGGCTTCTCTCAGGCAAAACTGTGTCAGATGAAGCAGAGAGGAGTTTAATAGTGAAACTAAAGACAGAATGTGGCTATCAGTTCACTTCAAAATTGGAAGGCATGTTCACTGACATGAAGACTTCAGAGGACACAATGCGCGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAGGACCAACCCTTATTGTTCAGGTACTTACAACTGGTTCTTGGCCAACACAGCCTGCAGTACCTTGTAATCTCCCAGCTGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCCTACTACCTTGGGACCCACACCGGTAGAAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAGCCATCTTTGGAAAGGGTCAGAAACATGAACTGAATGTGTCGACTTTCCAGATGTGTGTTCTCATGTTGTTCAACAACTCTGATCGACTCAGCTACAAAGAAATCGAACAGGCTACTGAAATCCCGGCAGCAGATCTTAAACGCTGTTTGCAGTCGCTAGCGTGTGTAAAGGGCAAAAACGTGATAAAGAAAGAACCCATGAGCAAAGACATAGGAGAGGAGGATTCGTTTGTTGTGAACGACAAATTCACCAGCAAGTTTTACAAAGTGAAGATCGGAACCGTGGTAGCCCAAAAGGAGACAGAACCAGAGAAGCAAGAGACGAGACAGAGAGTGGAGGAAGACAGAAAACCTCAGATTGAAGCAGCCATTGTAAGGATCATGAAGTCCAGAAAAATACTAGACCACAACAACATAATCGCAGAGGTGACGAAACAGTTGCAGCCACGGTTCCTGGCTAATCCCACAGAGATAAAGAAGAGAATCGAGTCGCTCATTGAACGAGATTTCTTGGAAAGGGATAGTACAGACCGGAAACTTTACCGCTATCTAGCCTAAATAAGTTGAATACCACAACCAAAAAAAAAGACTTCACTCTCTTTTTTTTTCTTTGCTTTGTTTCTTCTGTTTGGTGTAAAAGCTCTGAACTGTACGGTAGTCGGTAAGAACGAACCAACACTGCATCACTACCGTTTAATCGAATATTTACATTTGTTTCCTTTTC
CDS Sequence
- >fgenesh2_kg.1__2664__AT1G26830.1
ATGAGTAATCAGAAGAAGAGGAATTTTCAGATAGAGGCGTTTAAGCATCGCGTCGTTGTAGATCCCAAATACGCTGATAAAACTTGGCAGATTCTTGAGCGTGCGATCCATCAGATTTATAATCAAGATGCTAGCGGTCTCAGTTTCGAAGAACTTTACAGAAATGCGTACAACATGGTCCTGCACAAGTTTGGTGAGAAGCTTTATACTGGGTTTATTGCTACTATGACTTCTCATCTCAAAGAAAAGTCCAAGCTTATCGAGGCAGCTCAAGGAGGGTCATTCCTTGAAGAGCTCAATAAGAAATGGAATGAGCACAACAAAGCGTTAGAGATGATTCGAGACATTCTCATGTATATGGATAGGACTTACATTGAGAGCACCAAAAAGACCCATGTTCATCCGATGGGGCTTAACTTGTGGAGGGATAATGTTGTGCATTTCACTAAGATACATACAAGACTTCTAAACACTCTTCTTGATCTAGTGCAGAAGGAACGGACTGGTGAAGTTATTGACAGGGGGTTGATGAGGAATGTGATTAAGATGTTTATGGACTTGGGTGAATCTGTGTATCAGGAGGATTTTGAGAAGCCGTTTTTGGATGCGTCTTCTGAGTTTTATAAGGTTGAGTCTCAGGAGTTTATTGAATCTTGTGATTGTGGGGATTACCTAAAGAAAGCAGAGAAACGCCTTACTGAAGAAATAGAGAGGGTAGCACACTACTTGGATGCCAAGAGCGAAGAGAAGATTACTAGTGTGGTTGAGAAAGAGATGATTGCCAACCACATGCAGAGACTGGTTCACATGGAGAACTCAGGTCTGGTTAATATGCTTCTGAATGACAAGTATGATGATTTGGGCAGAATGTACAACTTGTTTCGCAGGGTTACTAATGGTCTTGTTACTGTCAGAGACGTTATGACTTCTCATCTTAGGGAGATGGGAAAACAACTGGTTACTGATCCGGAAAAGTCAAAGGATCCGGTGGAATTTGTACAGCGTCTATTGGATGAGCGGGATAAATATGACAAAATCATCAGCACCGCATTTGGCAATGATAAAACCTTTCAGAATGCGCTGAATTCTTCATTTGAGTATTTCATCAACTTGAATGCTCGTTCTCCTGAGTTCATCTCACTGTTTGTTGATGACAAGCTACGGAAAGGACTTAAGGGTATCGCCGATGTGGATGTGGAGGTTATCCTTGATAAAGTTATGATGCTATTCCGTTATTTACAAGAGAAAGATGTCTTTGAGAAGTACTACAAGCAGCATTTGGCTAAAAGGCTTCTCTCAGGCAAAACTGTGTCAGATGAAGCAGAGAGGAGTTTAATAGTGAAACTAAAGACAGAATGTGGCTATCAGTTCACTTCAAAATTGGAAGGCATGTTCACTGACATGAAGACTTCAGAGGACACAATGCGCGGGTTTTATGGCAGTCACCCCGAGCTTTCAGAAGGACCAACCCTTATTGTTCAGGTACTTACAACTGGTTCTTGGCCAACACAGCCTGCAGTACCTTGTAATCTCCCAGCTGAAGTTTCAGTTCTCTGTGAGAAGTTCCGTTCCTACTACCTTGGGACCCACACCGGTAGAAGATTGTCCTGGCAAACAAACATGGGCACAGCAGATATCAAAGCCATCTTTGGAAAGGGTCAGAAACATGAACTGAATGTGTCGACTTTCCAGATGTGTGTTCTCATGTTGTTCAACAACTCTGATCGACTCAGCTACAAAGAAATCGAACAGGCTACTGAAATCCCGGCAGCAGATCTTAAACGCTGTTTGCAGTCGCTAGCGTGTGTAAAGGGCAAAAACGTGATAAAGAAAGAACCCATGAGCAAAGACATAGGAGAGGAGGATTCGTTTGTTGTGAACGACAAATTCACCAGCAAGTTTTACAAAGTGAAGATCGGAACCGTGGTAGCCCAAAAGGAGACAGAACCAGAGAAGCAAGAGACGAGACAGAGAGTGGAGGAAGACAGAAAACCTCAGATTGAAGCAGCCATTGTAAGGATCATGAAGTCCAGAAAAATACTAGACCACAACAACATAATCGCAGAGGTGACGAAACAGTTGCAGCCACGGTTCCTGGCTAATCCCACAGAGATAAAGAAGAGAATCGAGTCGCTCATTGAACGAGATTTCTTGGAAAGGGATAGTACAGACCGGAAACTTTACCGCTATCTAGCCTAA
Protein Sequence
- >fgenesh2_kg.1__2664__AT1G26830.1
MSNQKKRNFQIEAFKHRVVVDPKYADKTWQILERAIHQIYNQDASGLSFEELYRNAYNMVLHKFGEKLYTGFIATMTSHLKEKSKLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTHVHPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERTGEVIDRGLMRNVIKMFMDLGESVYQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKAEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYDDLGRMYNLFRRVTNGLVTVRDVMTSHLREMGKQLVTDPEKSKDPVEFVQRLLDERDKYDKIISTAFGNDKTFQNALNSSFEYFINLNARSPEFISLFVDDKLRKGLKGIADVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDEAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGFYGSHPELSEGPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDSFVVNDKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA