Information report for fgenesh2_kg.1__2364__AT1G21700.1
Gene Details
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Functional Annotation
- a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).
Homologous
- Brassica napus: BnaA08G0242600ZS, BnaC08G0267900ZS, BnaA06G0154600ZS, BnaC05G0188000ZS
- Brassica oleracea: Bo8g071010, Bo5g034720
- Brassica rapa: Bra016409, Bra017943
- Citrullus lanatus: Cla97C11G221920
- Cucumis sativus: CsGy4G016800
- Glycine max: Glyma.04G247200
- Gossypium hirsutum: Gohir.D05G271100
- Juglans regia: Jr06_03670
- Manihot esculenta: MANES_02G166500
- Medicago truncatula: Medtr3g088480
- Populus trichocarpa: POPTR_005G180800v3
- Prunus persica: PRUPE_1G492600
Gene Resources
- Pfam: PF00249 PF04433 PF16495
- UniProt: D7KKT3
- RefSeq: XP_002893181.1
- EMBL: GL348713
- AlphaFoldDB: D7KKT3
- InterPro: IPR000433 , IPR001005 , IPR007526 , IPR009057 , IPR017884 , IPR032451 , IPR036388
- PANTHER: PTHR12802 , PTHR12802:SF61
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS50135 , PS50934 , PS51293
- Gene3D: 1.10.10.10 , 1.10.10.60
- CDD: cd00167
- eggNOG: KOG1279
- STRING: 81972.D7KKT3
- HOGENOM: CLU_004447_4_1_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__2364__AT1G21700.1
ATTCACAATGATGATGGTTCAGAGATGATTTGATACTACAAGACACTAACTTAGAACAACACTACGGTCTCAAAGCCATTAACTTATCTTTAAAAATAACAAGGCAAAATAAATATGGATACTGATAAGCTAAATAAGCTAGACAGATGGATCTCAGTTTAAGCCTAAGCCGGACCCTGAGCCTGAACCCGTGGAAGACCTAACCATCGGGTGACTAAACGAAGGCTGGTTGATCGATGCTGCTCCTGCTGCAGGGGTATTAAGTTGGTTGTTGCCAAACATGACGTTTGGTGATGCTGTTGATCCTGCATTGGTCTGTATCGCATTGAGCGGTAATCTTGGGCCAAAAGAGAAAGCTTGTTGTTGTTGTTGTTGTTGTTGGCGTGCCATGAACTGCATCTGTGCATGAACTTGCGGGTTGTTGCCGAATCCCGGGATTATGCTTGGTTGAGAAGTTGCTGAAGCTTGTTGTTGTTGCTGCTGCTGTTGCTGATGCATGAGAGAATTGATGTTGTTACCACCTGTGGATAGAGACATGCCTTGGAGATTATTATTATTAGTCTGTGGAGAGATTCCTCCAGGTGATCCAAATCTTGCGGTGAGCATACGAGCCCGTTCTGCAGAAAATCTCTGACGGGTTTTCTCTACTTGTTCGCATTCTTTCATCAACAATGTTTCAATTTCTGCAAACTGCTTTAGCTTCAGCTCCATCCTCTTCAGCTGCGGTTTTTACTCAGATCAGCAATAAACACTATACAACAAAATAAATCAACTAACTATAGTAATTCTCATCAGTAACTGGTTCGGCTATTTTACCTGGTGATTAACGATATTTGCAGAAAGTCTTTGGATTTCGCGTTCCTCATGATCAGCAAACAATTTTGCTTTTGTTGCTGCAGCTGATAGACCGGCTCTAAATGCTGCCATAACCTTATCCTGTGGCAGTGGAGTCGGCGGTTCTGCTCCGTTTTGGCTTGATGTTTTGTGTGCTCCTGAGTTTTCTTTTACAATTAGAGCATGTTGGTATCGCAGATTAGGTTAAAACAAAAGAACCAAGAAATTACAGTAAAGAGAACAATCAAATAACTTCCTTACCATCTTGCTGTTGATTTTCTCCATCAAGCAAGCTGACTTCTTTCCCTTGCACTCCCTCGGATTTCATCCTTGATAGATCAAGAAGTTTCAGCATCGTCCATATAATTTATTAAACTGAATCATATACTACAGAGATTTTTAAATTGGATAGAGACTATATAATACACTAACCTATCGTCCTCAGATAAAACCGCGAGGGACTCATGGGCACAGGACGCAGCAACTCGAGGTCCAACAGCTGATGCCAAAAATGCAACCTAAAAATGTTTCGGTATCAGGATCCTCATAATCTCCAAACTTATGTGCAATACAGGACCATTCTCCACTCAAAATATGCATACGATTTTGCTCTCAGATTAATCGATCAGATATCTCTAACTGGTGAGATCATAAGGATAATGAGAAGCGCATATGAAATCTGCATCAGAAAAAAGTTCACAAACCAATGCCATAACCGGATTCGGAGACTTCACAAATGGAAGCTTGATCTCAGTGTCAGAACCTTGCTCAGAATATCCTGCAGAGGCAAGCCGACAATGAGTATGGCATGTCAAAGGAAATAACTATGGAAAGTAATTCATTGCTACAAATTGAATAAAACAAAATCACCAGGCAAATCCCCATTTGAATCTGTTCCTTTGTGGTCATATCCATTTGTAGGGTTTTCCGTATTAGTTACACCAGGAACCTCAACATTATCTAAAAGACCATCCTCCACAGGTAATCGAAGAAAATGAAGAATGCATTGAGCTTTTGACTTGGAACCAACATGATCAGCAATTTGAACCCAATTTTCATTGTAGAGTTCCACAGCTTCAAGAAGCAAGAGAGTTTCCTGATCAGTCCAATTGTCTCCATCTTGATCGCCATAAAATTTGGTTGGATCCACTTTTACAAAGTCAAGACAAGAATGTCCAACAACAAATCTTCCATGGTGAAAACAATCACAGCATAAGAGTGTATCCCCCTGTAAAGTAGAGATGAAGACCCATTAGTTAAAAGCGCTCCAGTATCCGAAACAGTAAGCAAGATAAGGCTTGGAGTCTATTACATCACTGGCTGGAAAAATCAGATAGTGATACACAAAGAGCAATACGTAAGGGGAAGCAGCCTAAGAACCTTCTTTTGCGATTGGAAATACACAGTTGGAAGCGGTCGGGAACAGTGGTTGCAATGATTATCACATAGGTGTTCACGAATTCTGATGTCCAAGTCAGGGCTGTCACCATCCAAACTTGACAAGGATGAATAGACTTCACCCCCCTTGTGTCTACAGTTGGGCTTGTCAAATTTGATCAAACTATCAATAGATGTTAAAGCAGCAGACGGCACATTGACCTCACCATTTGTATCCTCCCTCACATCCAATACATCTCTAGAAGGCCCAGGATGTGACTGGGCAGTGGCACAGTAATTGATTATTCCCCAGTGATCAAGAAAACGGAAAACTCGTGCAAAATCTTCAATGTCAACACCATCAACCAATCCTTGGCAATCAGAAATCGTCAGTGTCTTTTCAGGGTTCTCCACATATTTTGAAACAATGGCGTTCCTGAATTCCATATAACTTTCGGGTGTATGATTTGGCGATTTCCCAGAGAAAAATTGTGGCACCACTTGCCTTTCAAGTCGATCCACTGTGTTTGGTGCAAACCAATCTGCTCAAATGTAACAGCAAAAGTAGAAGCATAAATTTGAGCATTGTATACAAAAATATCAGAAAGTAAAAATAAACTAAGAAGAAAATTACGATATATTCGAGGAACATGAATCCAGGAAATGAAATTTTAAAAGGACATCACTTGCATAATCTATTCAAGATGCACTTCTGAGATAAGTCACCTAAGGCTACTTCAAGCCTGCAGGTACTCTAATTTATTGATACAGAGATCATGTACAAATGTTCTAATACCTCTTCCTTTCCATCACACTGAACATGGGAACGTAGAGAAAGATATCATATGAAACTGAGTCGCTTTCAGATTAATAATGTAAACTAAGAACCATGCAGTAGACAAAAGGAAGATAAGAACTTATAGTCTTATACGCTTAGGAGATACCAGCATAAAAACCCTTTTGACTAATTCTCAATCCAATCACAATATATACTACAGGACTACTAACCAGCAAAAGCTGGTACTACATAAAGCCTTACCTCGAACATAAATGAGCATATAAACATAGTTATTTTCAAAGTATATGCAAACTCATGAATTGAAGAAAAAGAAAGAAAAAACAAACCTGAATGCATAGGCAAGACATGAACCAGATCCCCAAAGCGTTTAACAACTCCTTCTCCTTCCATAATAGGTGGTGGAGAGATAACATAAGCCGAAGACGATCCATCAAGATCAAGAGACAGAGAATCAGCCGGTACAGTAGATAACGCTTGCAATTGCCCAAACGAAATGTTCTCCAGAGCTGGAAGTAAACCTTGCCCTCTAGTCTCCCCAATCAAACCAGCTCTCTCAGCCGCCACAACAGCCATTACAGACGCGTGTGGACGGATCACAACGCGCTTAACCACTGCCGGGAAATCAGAGATGCGCGAACCAGAATCTTCAACTACCTCGCCAATACCAAGTCCCGGATCGGGAGTTGCGCCGCCGTTTTGGTGAAGCTCATCGGCATTTTCAACGTCATCCATTTCTTCGTTGTTGTTGTTATTATCTTCTTCTTCTTCCTCCATATCTTCCTCCTCTTGTTTCGGTTTCCTCGCCGCCGATAATCCCCCTCGCTTCTTCCGTTTCCATTTCCCTCTTCTATCTGCGACGGAATTGAAAAAAGGGTAATTCAATTCATACGAATTCTCGCGTACTCGAAATACCCATAACTACGATCTATGTGGGTAAGTCAAATCCCAATTCAAAATTGGATTTTGAGAGATATATAAAGATGAGAAAGTCGTTTCGCTATGCAATTTTACCTTCAGAAGCTGGCATTCTTGTGGGTGAAGATAGAGAAAGAGAGGTTTTGGGTTCTGTGGAATCAAAGCAAGAACCTAAGTAAAAAGAATTGCTTTCTTTGTCTTCTCTGCTCCGAGTCGTTCTGATTTCTAGCTCTCGAGCTAAACACCAAACCTTTTTCTCGCAATTTCTTT
CDS Sequence
- >fgenesh2_kg.1__2364__AT1G21700.1
ATGCCAGCTTCTGAAGATAGAAGAGGGAAATGGAAACGGAAGAAGCGAGGGGGATTATCGGCGGCGAGGAAACCGAAACAAGAGGAGGAAGATATGGAGGAAGAAGAAGAAGATAATAACAACAACAACGAAGAAATGGATGACGTTGAAAATGCCGATGAGCTTCACCAAAACGGCGGCGCAACTCCCGATCCGGGACTTGGTATTGGCGAGGTAGTTGAAGATTCTGGTTCGCGCATCTCTGATTTCCCGGCAGTGGTTAAGCGCGTTGTGATCCGTCCACACGCGTCTGTAATGGCTGTTGTGGCGGCTGAGAGAGCTGGTTTGATTGGGGAGACTAGAGGGCAAGGTTTACTTCCAGCTCTGGAGAACATTTCGTTTGGGCAATTGCAAGCGTTATCTACTGTACCGGCTGATTCTCTTGATGGATCGTCTTCGGCTTATGTTATCTCTCCACCACCTATTATGGAAGGAGAAGGAGTTGTTAAACGCTTTGGGGATCTGGTTCATGTCTTGCCTATGCATTCAGATTGGTTTGCACCAAACACAGTGGATCGACTTGAAAGGCAAGTGGTGCCACAATTTTTCTCTGGGAAATCGCCAAATCATACACCCGAAAGTTATATGGAATTCAGGAACGCCATTGTTTCAAAATATGTGGAGAACCCTGAAAAGACACTGACGATTTCTGATTGCCAAGGATTGGTTGATGGTGTTGACATTGAAGATTTTGCACGAGTTTTCCGTTTTCTTGATCACTGGGGAATAATCAATTACTGTGCCACTGCCCAGTCACATCCTGGGCCTTCTAGAGATGTATTGGATGTGAGGGAGGATACAAATGGTGAGGTCAATGTGCCGTCTGCTGCTTTAACATCTATTGATAGTTTGATCAAATTTGACAAGCCCAACTGTAGACACAAGGGGGGTGAAGTCTATTCATCCTTGTCAAGTTTGGATGGTGACAGCCCTGACTTGGACATCAGAATTCGTGAACACCTATGTGATAATCATTGCAACCACTGTTCCCGACCGCTTCCAACTGTGTATTTCCAATCGCAAAAGAAGGGGGATACACTCTTATGCTGTGATTGTTTTCACCATGGAAGATTTGTTGTTGGACATTCTTGTCTTGACTTTGTAAAAGTGGATCCAACCAAATTTTATGGCGATCAAGATGGAGACAATTGGACTGATCAGGAAACTCTCTTGCTTCTTGAAGCTGTGGAACTCTACAATGAAAATTGGGTTCAAATTGCTGATCATGTTGGTTCCAAGTCAAAAGCTCAATGCATTCTTCATTTTCTTCGATTACCTGTGGAGGATGGTCTTTTAGATAATGTTGAGGTTCCTGGTGTAACTAATACGGAAAACCCTACAAATGGATATGACCACAAAGGAACAGATTCAAATGGGGATTTGCCTGGATATTCTGAGCAAGGTTCTGACACTGAGATCAAGCTTCCATTTGTGAAGTCTCCGAATCCGGTTATGGCATTGGTTGCATTTTTGGCATCAGCTGTTGGACCTCGAGTTGCTGCGTCCTGTGCCCATGAGTCCCTCGCGGTTTTATCTGAGGACGATAGGATGAAATCCGAGGGAGTGCAAGGGAAAGAAGTCAGCTTGCTTGATGGAGAAAATCAACAGCAAGATGGAGCACACAAAACATCAAGCCAAAACGGAGCAGAACCGCCGACTCCACTGCCACAGGATAAGGTTATGGCAGCATTTAGAGCCGGTCTATCAGCTGCAGCAACAAAAGCAAAATTGTTTGCTGATCATGAGGAACGCGAAATCCAAAGACTTTCTGCAAATATCGTTAATCACCAGCTGAAGAGGATGGAGCTGAAGCTAAAGCAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGCGAACAAGTAGAGAAAACCCGTCAGAGATTTTCTGCAGAACGGGCTCGTATGCTCACCGCAAGATTTGGATCACCTGGAGGAATCTCTCCACAGACTAATAATAATAATCTCCAAGGCATGTCTCTATCCACAGGTGGTAACAACATCAATTCTCTCATGCATCAGCAACAGCAGCAGCAACAACAACAAGCTTCAGCAACTTCTCAACCAAGCATAATCCCGGGATTCGGCAACAACCCGCAAGTTCATGCACAGATGCAGTTCATGGCACGCCAACAACAACAACAACAACAACAAGCTTTCTCTTTTGGCCCAAGATTACCGCTCAATGCGATACAGACCAATGCAGGATCAACAGCATCACCAAACGTCATGTTTGGCAACAACCAACTTAATACCCCTGCAGCAGGAGCAGCATCGATCAACCAGCCTTCGTTTAGTCACCCGATGGTTAGGTCTTCCACGGGTTCAGGCTCAGGGTCCGGCTTAGGCTTAAACTGA
Protein Sequence
- >fgenesh2_kg.1__2364__AT1G21700.1
MPASEDRRGKWKRKKRGGLSAARKPKQEEEDMEEEEEDNNNNNEEMDDVENADELHQNGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGETRGQGLLPALENISFGQLQALSTVPADSLDGSSSAYVISPPPIMEGEGVVKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPSRDVLDVREDTNGEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYSSLSSLDGDSPDLDIRIREHLCDNHCNHCSRPLPTVYFQSQKKGDTLLCCDCFHHGRFVVGHSCLDFVKVDPTKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVPGVTNTENPTNGYDHKGTDSNGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLAVLSEDDRMKSEGVQGKEVSLLDGENQQQDGAHKTSSQNGAEPPTPLPQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFSAERARMLTARFGSPGGISPQTNNNNLQGMSLSTGGNNINSLMHQQQQQQQQQASATSQPSIIPGFGNNPQVHAQMQFMARQQQQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGNNQLNTPAAGAASINQPSFSHPMVRSSTGSGSGSGLGLN