Information report for fgenesh2_kg.1__2109__AT1G19330.1
Gene Details
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Functional Annotation
- Evening-expressed key component of Sin3-HDAC complex, which bind directly to the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) and PSEUDO-RESPONSE REGULATOR 9 (PRR9) promoters and catalyze histone 3 (H3) deacetylation at the cognate regions to repress expression, allowing the declining phase of their expression at dusk.
Homologous
- Actinidia chinensis: CEY00_Acc11816
- Brassica napus: BnaA06G0134900ZS, BnaC05G0162800ZS, BnaC08G0252800ZS
- Brassica oleracea: Bo8g068470, Bo5g027390, Bo6g119240, Bo2g082470
- Brassica rapa: Bra025731, Bra016509
- Gossypium hirsutum: Gohir.D06G009300, Gohir.A06G011900, Gohir.A05G196500, Gohir.D05G199600
- Juglans regia: Jr06_08360
- Manihot esculenta: MANES_18G029700
- Vitis vinifera: VIT_18s0001g11970
Gene Resources
- Pfam: PF13867
- UniProt: D7KHC5
- RefSeq: XP_002893042.1
- EMBL: GL348713
- AlphaFoldDB: D7KHC5
- InterPro: IPR024145 , IPR025718 , IPR038291
- PANTHER: PTHR13286 , PTHR13286:SF6
- Gene3D: 6.10.160.20
- eggNOG: ENOG502QSKD
- STRING: 81972.D7KHC5
- HOGENOM: CLU_082876_0_0_1
Sequences
gDNA Sequence
- >fgenesh2_kg.1__2109__AT1G19330.1
ACATACCCATCTCTCCAGATCGTATCAGAACAGATAGTTTCCAATAGGAAGCTTTAGAGAGTCATTTGGTTTCTTGATGGTACTTACACGGCTAAACAACAGAAGTAAGAAGAAACAACATCTACCCTATAGCCAAACATCTCTAGAATAACTAAAACTTAGCAAGCCACGAATGGTTAAACAAGTCGGTGTACCTTACATACAGGATTTGTTAAAAGTCAGGGCTTCTTTTTTAGCTGATGCAGTTAAGATCAGTGTTTCTGGCTTCTTTTGATTGCAACTTGCATGCCTTCTTCATTCTCTTTGCAGCTTGGACAAACCCCACAATAACCTGAAGCTCATCCATTTGCTGTAATCATATCACAGTTTTACATCATTTTATTGATCATCAGGACAAAGTCAAGGCAAATTTGTAACTCAGAGAAGGCTTAGAAGGATTTTATGTACCTGAGACATGAAGTGCCTTTGAACAATGTCAATTAGTTGCTCCTTTGATGGATTAGGAATTGCATCCACCTATACAAAGAGTTTATTCAGAAACAAGCACACAGATAGTAGAGTTCAAGATTGAGTAAACGAAAGTTAATTTCTTTTTTTCTGGAAATCAACTTACAAGGTTAAAATGTCGCCAATAATTCAATAAAGCGGGCATTTCCAATTTGCTAAGATCAACCTTCTGCATGAAAGCATATGACATCGCATCAGTAAACTTATGACTAGTTGCATTATGTTCACTGGCAAATGAAATAGATGTCAAAGTTTTTGAATGCGTACCATGTTTTCACGGGGAGTAAAACCCGAACTTTTTAATTGCGAGTCAGATGATAGAGATCTGCTCATCGTCTTGTGAGATGACCGCGATGATCTCTGCCCTCTTTGCTTCGACTTATGAGGCTTCAGTGTGTCCTCAGATGCTGGAAAAGAAACAACTTATCATAGAAACAAGACTGAGGAAATCAGTTAAAAAGGTTCCCACTTTTATGTCCAAATTAAAAACAATATACCACTTAGCAGCTCACTAAAGACTAACTCAAGTTTAGAGATCTCTCTGTCAAGTTTTTGAGAAATTGGCAGAATCCTTAAAAAATATTAAGGAACCAAACTTACTCATATCGGAGCCATTCCTCTGTGTGTTTTCGAAATCAAGATCATCGTCTTCTTCGTTTCCAGTAGGATGTTCAAGGACACTAAGCGCATTCCTCTGCAACTTTACTTCTATACCATTTGTCAGAACCTAAAAACAAAAAGAAAAACCAAAAAGCACAAGAATGATTCTGATTATATACTTTAACTCCATAAACAAGTACTGACATATTGATTTAAATTAAAGCTTAAGAAGAAGAAGAATATGGTATGTTTCAAACTAAATTACACTTTTCTTTTGTTACTTCCATAGAAATTCTCGGAGACAAGAACTGGTGGAATGTGATATCACTAATAGTAAAATATAATCGTGATACTGAAGAAAATTGTATATTATTTGGATTATTCTCTAAAGTTTAAAGCTAGAATATGGTGAAGTTACTCCATTAGGTCCACATACACAGAGACACTATCAAAAAGATCTTGCAGAGAAACTTATAATATAAACTAGCCAACCAAAGCAAAAAGATTTGATAAAGATAAAAATAATCGACAGAAGTGACACTGCTTGGGGACGAAAATTACTCAACTAATTAAGAAAGAACAAAAGAAAAAAAACCTCTAAAACAAATGATTATCACTAATCAAAAGACTAACAAATTTCAAAAAAGCCAGCTTGAATCCACAAGGTGGTGAACAAAAAAGGATAGAATTGTCAAGAAACATGATGGAGAATTAGATAACAAGTGCATTTTTGTTATGATGTTTTTTTCAACAGGCGCGAAATTAAAGTTGCCTAACTTAATGTTTGCAAACTCAAAATCCCTTATCCCCTATAGATGATTCCTAAAATTGAGCCTGAATCTCAGCAAGAAATATCAAAATATCTAAAGAGTAATATACTGATAAAAAGATGTTTCAGAAGCTTTTATCAGATGCAAAAAAAAAAAACTGTTAATCAGAAAAATTAATATAGAAAAACAAAAATCAATGAAGGCTTCATGAATAACCTAACTATCGAAGAACTCAGAATCCAGCAGTAATGGTGACTTGAATGCTAATAACACGCATGCAACAAGTTCAATCGCCAGATTTTAAAAATTTACAGATTTAACATTGGTGAAGACAAAATGATTTCATTTTTTATCACACTAACAAGTAACAACTCTTGATTTAATTATATGAGACTTGATTAACGAATCGAAGCTAATTAATGATTATATCTAATTTAAAGAAAGATCATTTTGAGAAATTCAAGAGAAAATCCAAAATTTGAAATTCAAAATCATCCCAAAACCCCAAATTATGTTCATCGATTCAAAAGATTGAATTGCAAACTTGGTAAATCCAGAAAACAAAGAGAAACACTTAAGATTAGATCGAAATTTTATCTATAAAAGGAAAACGGAAAAGGAAACAAGAAAGATAACATTTTTACCAAAAAAGGAAAGAAAGTAAAAAACTTTACCAGCCAATGCCAACCACCGAGACCGACAGCTTTTTTGACAACACCTTGAAGACCAACAAGCACCGATTTCGTACGGTTGTTTCCGGTGACCACCACTTTTGTATGACGTGGCAATACTGATAACTCTTCTTCACTACTGCAATCGCCGTAAAAGCTCTGAATCTGTGGGAATCCTCCATTGACCACTCCTGAGCTATCTACAGCTTCCAGCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTAATCTAATCCGAAGAAACCAACAGACCCACTTCGAAGTTTTCAGCTGTGAACACTGATACAAAATCGAAGATCATGCATTGCTAAGAGAGGGAAAGATCAGATGATTGAGCGGGAAAAGTGGAGAGAGATCGATGTAAAATAATTAGGGTTTGTCCCACAAGAAGAAAGTAGAGAGAGAAGAGAGAAGAAG
CDS Sequence
- >fgenesh2_kg.1__2109__AT1G19330.1
ATGCTGGAAGCTGTAGATAGCTCAGGAGTGGTCAATGGAGGATTCCCACAGATTCAGAGCTTTTACGGCGATTGCAGTAGTGAAGAAGAGTTATCAGTATTGCCACGTCATACAAAAGTGGTGGTCACCGGAAACAACCGTACGAAATCGGTGCTTGTTGGTCTTCAAGGTGTTGTCAAAAAAGCTGTCGGTCTCGGTGGTTGGCATTGGCTGGTAAAGTTGACAAATGGTATAGAAGTAAAGTTGCAGAGGAATGCGCTTAGTGTCCTTGAACATCCTACTGGAAACGAAGAAGACGATGATCTTGATTTCGAAAACACACAGAGGAATGGCTCCGATATGATTGTTTCTTTTCCAGCATCTGAGGACACACTGAAGCCTCATAAGTCGAAGCAAAGAGGGCAGAGATCATCGCGGTCATCTCACAAGACGATGAGCAGATCTCTATCATCTGACTCGCAATTAAAAAGTTCGGGTTTTACTCCCCGTGAAAACATGAAGGTTGATCTTAGCAAATTGGAAATGCCCGCTTTATTGAATTATTGGCGACATTTTAACCTTGTGGATGCAATTCCTAATCCATCAAAGGAGCAACTAATTGACATTGTTCAAAGGCACTTCATGTCTCAGCAAATGGATGAGCTTCAGGTTATTGTGGGGTTTGTCCAAGCTGCAAAGAGAATGAAGAAGGCATGCAAGTTGCAATCAAAAGAAGCCAGAAACACTGATCTTAACTGCATCAGCTAA
Protein Sequence
- >fgenesh2_kg.1__2109__AT1G19330.1
MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVKLTNGIEVKLQRNALSVLEHPTGNEEDDDLDFENTQRNGSDMIVSFPASEDTLKPHKSKQRGQRSSRSSHKTMSRSLSSDSQLKSSGFTPRENMKVDLSKLEMPALLNYWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACKLQSKEARNTDLNCIS