Information report for fgenesh1_pm.C_scaffold_4001673
Gene Details
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Functional Annotation
- Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.
Homologous
- Arabidopsis thaliana: AT2G39250.1, AT2G39250
- Brassica napus: BnaC08G0350200ZS
Gene Resources
- Pfam: PF00847
- UniProt: D7LCG4
- EMBL: GL348716
- AlphaFoldDB: D7LCG4
- KEGG: aly:9317705
- InterPro: IPR001471 , IPR016177 , IPR036955
- PANTHER: PTHR32467 , PTHR32467:SF177
- SUPFAM: SSF54171
- PROSITE: PS51032
- Gene3D: 3.30.730.10
- OrthoDB: D7LCG4
- CDD: cd00018
- eggNOG: ENOG502R1D7
- STRING: 81972.D7LCG4
- HOGENOM: CLU_035462_3_1_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_4001673
CATGGATCAAAACAAGTGGTCAAAGAAGAAGAATTGTTCATGGCAATGAAAGGGAATCCTGATGATGCTACAACTGTCTTTAACGGTTTCATTTCTGTGATCGGTAGATATACCGGCAACGGCTTCCCATGCAAACTCATCACAGATCGATTCAAACCCATGTAATAATCTGCTGGTTCCAAAATTCTTTTTTTTGACGATGAAGATATTCCAAGACTTAGCTCGAGATCATTGTGCTCATTTCCTGAAAACATTCCAAGTTTTTTTGTGAATCATGTCATAATGTCGACAATAACTAATCTTAAACTAAATATATCGAGTTGAATAAGATCTATATACTAATATATATGCCTTGAATTTCTAACGAGAATGGTTCTGAAAGGTAAGGCTAGCTAGCTAGGGTTTGGTTGATCAAATTAAAGGTGTATGTGCAACATGCATGTGTCAAAGTGAAGTTGTAATTAGGGGTTTTAGCTTTCACCTAAATGACATAACACATGATTTAGTATGCATATTTATAATCGTGACCCTACATTTATAAATTACCTTTATTATGGGGACCCAACTTAATATCCCCTTCCATCTTTCTTATCTCATTGCATTTTGCTGCTGCTGCATTCCATCCCCTATGAGTATTCATTGAAACACGTTTATAAATCTTCCACATTCTTAATATTGAATGAAATTGTACCCGCGAGAAGAGTAATCGAACCTGTTTTGGAAGAGATGGATGTGATCATTTCTCATATGGGTGTTTTTGTATCTAGAACCTCCTCTTGCTAAGCTTGCACTCGCTCGTCTAAGAGATTGCACAAACTCTTCTTTGCTTAAATTCTTCATCTATCATATCATTCAAAATATCCATATATTAGTAATCGAAGGTCCAACTTCTCTGTCTCTTTATATATACACATATCTAAACCTAATTAATTAATTAGCTTAGCTATATATGAAACAATAAGTTTACATGAAAAATAACCTTTTCAATGTCTTGTTTGTAATCATCCACGATAAAGTTGATATCTGCTTGGAGTCCCCGGAATCTGATAGCAGCTCGGTCGTACGCTCTATTATGTATTTGAATATATAAGTCAACTAATATTTCTCTAAAGCTATAAATTCTTTTTAAAATGTCAAAAAAAAAGAACAAGTGTTATGTCATGTAACATCTGTTACTATTTCTTACACCTTGCGGCTGTGTAGGCTGTGTCGAAACCACCTGTTTTTAACCAAACAGAAGACAAAAATGAAAAAGTGAAAATCTTTCATCATTTGGTTTACTCTTTTTAGACTTCTCTTATCCAAGAAGGTTTTAACCTTAATATAATAAGAAAGAAATAGAAAATCGCATCTACTTACCCAAATAAACCTGTTTTCCGCAATCCCTACACATACATCCCAAAACCAAATGTTAATCTTACAAATAATTAAGAAAATCTTTTATAATTAACTTAAGTTTATGAATGAATGAATACCAAATATGAGATTCCCAACGGCCAGTTCGACGGTAAAAGGTGACGCCACGATAATGGGAGCTTCTCGATCTTGGACCACGTCGGCTCTTCTTCTTCATCACCAACATTTCTTGTTTATTTCTTTGCATCGACGACAGATTCAACCACTCGTTTCCGGCGCCGGATAACACACTCTCCGGAGGAGGAGGAGGAGGAGGAAGGATTTCAACCTCTTCTTTTCTTTTAAGGATTCCGAATGTAATTAAAGACAAGTTGTCGTTTGAGGGATTAATGGAATCTTCTTCTTGATGGACGATGGAGGTTGGTACTTTGCAATCTTCGTCTTCGTTGTGTGTCGACAAGATTCCGAGGTTGAGGTCCAACAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_4001673
ATGTTGGACCTCAACCTCGGAATCTTGTCGACACACAACGAAGACGAAGATTGCAAAGTACCAACCTCCATCGTCCATCAAGAAGAAGATTCCATTAATCCCTCAAACGACAACTTGTCTTTAATTACATTCGGAATCCTTAAAAGAAAAGAAGAGGTTGAAATCCTTCCTCCTCCTCCTCCTCCTCCGGAGAGTGTGTTATCCGGCGCCGGAAACGAGTGGTTGAATCTGTCGTCGATGCAAAGAAATAAACAAGAAATGTTGGTGATGAAGAAGAAGAGCCGACGTGGTCCAAGATCGAGAAGCTCCCATTATCGTGGCGTCACCTTTTACCGTCGAACTGGCCGTTGGGAATCTCATATTTGGGATTGCGGAAAACAGGTTTATTTGGGTGGTTTCGACACAGCCTACACAGCCGCAAGAGCGTACGACCGAGCTGCTATCAGATTCCGGGGACTCCAAGCAGATATCAACTTTATCGTGGATGATTACAAACAAGACATTGAAAAGATGAAGAATTTAAGCAAAGAAGAGTTTGTGCAATCTCTTAGACGAGCGAGTGCAAGCTTAGCAAGAGGAGGTTCTAGATACAAAAACACCCATATGAGAAATGATCACATCCATCTCTTCCAAAACAGGGGATGGAATGCAGCAGCAGCAAAATGCAATGAGATAAGAAAGATGGAAGGGGATATTAAGTTGGGTCCCCATAATAAAGGAAATGAGCACAATGATCTCGAGCTAAGTCTTGGAATATCTTCATCGTCAAAAAAAAGAATTTTGGAACCAGCAGATTATTACATGGGTTTGAATCGATCTGTGATGAGTTTGCATGGGAAGCCGTTGCCGGTATATCTACCGATCACAGAAATGAAACCGTTAAAGACAGTTGTAGCATCATCAGGATTCCCTTTCATTGCCATGAACAATTCTTCTTCTTTGACCACTTGTTTTGATCCATGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_4001673
MLDLNLGILSTHNEDEDCKVPTSIVHQEEDSINPSNDNLSLITFGILKRKEEVEILPPPPPPPESVLSGAGNEWLNLSSMQRNKQEMLVMKKKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSRYKNTHMRNDHIHLFQNRGWNAAAAKCNEIRKMEGDIKLGPHNKGNEHNDLELSLGISSSSKKRILEPADYYMGLNRSVMSLHGKPLPVYLPITEMKPLKTVVASSGFPFIAMNNSSSLTTCFDP