Information report for fgenesh1_pm.C_scaffold_4001520
Gene Details
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Functional Annotation
- Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.
Homologous
- Arabidopsis thaliana: AT2G37630.1
- Brassica napus: GSBRNA2T00152674001, BnaC04G0090000ZS, BnaA05G0077400ZS, GSBRNA2T00116949001
- Brassica oleracea: XP_013636517.1, XP_013636516.1, Bo4g030340, XP_013629516.1
- Raphanus raphanistrum: RrC8766_p2
Gene Resources
- Pfam: PF00249
- UniProt: D7LJV5
- EMBL: GL348716
- AlphaFoldDB: D7LJV5
- KEGG: aly:9315752
- InterPro: IPR001005 , IPR009057 , IPR017930 , IPR052844
- PANTHER: PTHR47214 , PTHR47214:SF3
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: D7LJV5
- CDD: cd00167
- eggNOG: KOG0048
- STRING: 81972.D7LJV5
- HOGENOM: CLU_864276_0_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_4001520
CAGGGGCGGTCTAATCTGCAACCCATGTGTTGTTCAAGAAACTTGGTGAGTCTGATATGCTTAGAAGTCCATTGATCAGCCAGTTTCTGGTCTTTGGCCTCGGCATCTCGCCTCAAACCAACGAGCTGTTCTCTGTACTCTCCTTCAATCTTCTCCATTGCGCTCTTTTGCTCTTCCCTAAGAGCTTTCATCTTTGCCTCAATCTCCTCCATCTTCTCCCTTTGTCTACACGTCTTCTCTGACTCTAGCTGCAGCTCCAGCCTCCTTAGCCTCCATGCAGCCTCTTTCTTATGGTCCGCCCAAGCTCTATGCCCTTCCTCCAACTCTCTACAACATTCCACTAGTTCTGACAAGAACACACTCTCGCTACTCCCACTACAAGACGGCATCATACTCCCTAACACAAGTCCCCCAGGACCGCTCTCTGCTCTCTCGGGCTGTTGCTGCTGCAGCCACGGGATTGGCGGTTGAGGCGCAGCTGCAGCCACGGTGGAGGGCGATAATGTTAAAGTCACCGAGGGAGGCCTGGCAACAACATTGTTCCCATTATTAGAAGTAGCTAACCAAGGCGGGATCACCGGGTTAGGAGGCTGAACTTGTTGTTCAGAATGTAAAAACCCTCCATTCGAATTAGCCATCACAACCGTGGCAGCAGCGGCAGCAGCAGCAGGAACAACGTTAGACCGCTCTTTGACAAGCTTCTCAGCAAAACTCTCGAGAATCCGATCGTACTTACTCTCGTCAATAGGCTCAACTCTCTTGTTACTCTCTTTCTCTTCTCTCTGTTGCTTCTCCTTAAACACTTCCCACCACTTCCCTAACCGCTTGGCCGTCCTCCCGGGAACCTCAGCAGCAATCTTCTTCCACTTGTTGCCGTGTTTCTCCTGAAGACGGATCACAAGCCTCTGCTCTTCCTCAGTCAAAGAACCTTTCTTGATCCCTGGTTTAAGATAATTCTTCCATCTCTCTAAACAAGACTTGGCGTCACGGTTCAAAGGTTTGTTCATACGCTCAGACACAAGATGCCATTCTCTCGGACCGAACTGTCTAACGTACGCACGTAACAATGCATCTTCTTCACCACTCCAACGTTGTCTCTCTTTCAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_4001520
ATGAAAGAGAGACAACGTTGGAGTGGTGAAGAAGATGCATTGTTACGTGCGTACGTTAGACAGTTCGGTCCGAGAGAATGGCATCTTGTGTCTGAGCGTATGAACAAACCTTTGAACCGTGACGCCAAGTCTTGTTTAGAGAGATGGAAGAATTATCTTAAACCAGGGATCAAGAAAGGTTCTTTGACTGAGGAAGAGCAGAGGCTTGTGATCCGTCTTCAGGAGAAACACGGCAACAAGTGGAAGAAGATTGCTGCTGAGGTTCCCGGGAGGACGGCCAAGCGGTTAGGGAAGTGGTGGGAAGTGTTTAAGGAGAAGCAACAGAGAGAAGAGAAAGAGAGTAACAAGAGAGTTGAGCCTATTGACGAGAGTAAGTACGATCGGATTCTCGAGAGTTTTGCTGAGAAGCTTGTCAAAGAGCGGTCTAACGTTGTTCCTGCTGCTGCTGCCGCTGCTGCCACGGTTGTGATGGCTAATTCGAATGGAGGGTTTTTACATTCTGAACAACAAGTTCAGCCTCCTAACCCGGTGATCCCGCCTTGGTTAGCTACTTCTAATAATGGGAACAATGTTGTTGCCAGGCCTCCCTCGGTGACTTTAACATTATCGCCCTCCACCGTGGCTGCAGCTGCGCCTCAACCGCCAATCCCGTGGCTGCAGCAGCAACAGCCCGAGAGAGCAGAGAGCGGTCCTGGGGGACTTGTGTTAGGGAGTATGATGCCGTCTTGTAGTGGGAGTAGCGAGAGTGTGTTCTTGTCAGAACTAGTGGAATGTTGTAGAGAGTTGGAGGAAGGGCATAGAGCTTGGGCGGACCATAAGAAAGAGGCTGCATGGAGGCTAAGGAGGCTGGAGCTGCAGCTAGAGTCAGAGAAGACGTGTAGACAAAGGGAGAAGATGGAGGAGATTGAGGCAAAGATGAAAGCTCTTAGGGAAGAGCAAAAGAGCGCAATGGAGAAGATTGAAGGAGAGTACAGAGAACAGCTCGTTGGTTTGAGGCGAGATGCCGAGGCCAAAGACCAGAAACTGGCTGATCAATGGACTTCTAAGCATATCAGACTCACCAAGTTTCTTGAACAACACATGGGTTGCAGATTAGACCGCCCCTGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_4001520
MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEPIDESKYDRILESFAEKLVKERSNVVPAAAAAAATVVMANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWLQQQQPERAESGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKSAMEKIEGEYREQLVGLRRDAEAKDQKLADQWTSKHIRLTKFLEQHMGCRLDRP