Information report for fgenesh1_pm.C_scaffold_4000727
Gene Details
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Functional Annotation
- Encodes a U-box E3 ubiquitin ligase involved in ubiquitination of pattern recognition receptor FLS2.
Homologous
- Arabidopsis thaliana: AT2G28830
- Brassica napus: BnaA04G0186500ZS, BnaC04G0488500ZS
- Brassica oleracea: Bo4g166850
- Brassica rapa: Bra035665
- Gossypium hirsutum: Gohir.A05G096300, Gohir.A07G097101, Gohir.D05G096500, Gohir.D07G101600, Gohir.A03G041500, Gohir.D03G126600
- Juglans regia: Jr14_11400
- Populus trichocarpa: POPTR_009G029600v3
- Prunus persica: PRUPE_6G079400
- Vitis vinifera: VIT_06s0004g04530
Gene Resources
- Pfam: PF00514 PF04564
- UniProt: D7LK90
- EMBL: GL348716
- AlphaFoldDB: D7LK90
- KEGG: aly:9317080
- InterPro: IPR000225 , IPR003613 , IPR011989 , IPR013083 , IPR016024 , IPR036537 , IPR045210
- PANTHER: PTHR23315 , PTHR23315:SF336
- SUPFAM: SSF48371 , SSF57850
- PROSITE: PS50176 , PS51698
- Gene3D: 1.20.930.20 , 1.25.10.10 , 3.30.40.10
- OrthoDB: D7LK90
- CDD: cd16664 , cd21037
- eggNOG: KOG0167
- STRING: 81972.D7LK90
- HOGENOM: CLU_006348_5_1_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_4000727
CAGATTAGAGAGATTTGATCTTCCACACCTAAACCGGACTGTTGTTTCTGCTGGTCGTTAAAATGGCTAAACCGGTTAAGTAACTGTGCCGCTTTGCGTTTTCCTCTGTCAGTACCATTCTCAGCCATTTCTATTAAAAGACTCATAATCCCTAATTTCTGAGCTTCAATCAAATGCTGCTGATTCCATGAACACAAGTGCACTAATACTGCAGCTGCGTTTTCTTTGTTTCGCGGTGACCCGTTTCTGATAAAATCTACCATAACCGGAACTGGATCAGCGGCAGCAACCACTGATTTCCCGTCCGGGTGACTGGATAGTATGGCTAATATAGCGAGTGCTTCATCAACCATTCCACTTTCGGGTTCTGTTAGTAACCTCATTAGCACGGGCACTAAACCGGCTCTCACAGCTTTTCCTTTGTTCCCTTGAAATATGCAGAGATTGAACAGAGCAGTCGCCGCGTCTTTTTTGCCTCTTTGTGATCCTTCGCTCAGCAAGGTCACAAGAGGCGGGATCGCTCCTGCGGCACCTATTGTCACTTTGTTCTCGTCTATAACCGAGAGGCTGAAAAGTGTAGCTGCTGCGTTTTCTCTAGCTTCCATGCTGCCTCTCTGGAGCACATGAACAATACCTGGAACCGCTCCACATGAATAAACAATCCTTCCTTTGTTCTCTTGGCATATCGAGAGATTAAGAATCGATGTCACAGCGTGTTCTTGAGTTCTGTAGTCATTGGATATCGTGAGGAGATTCACCAGAAGAGGGATCGCGCCTGATGCAGCAATGGCGACTCGGTTATGGTTGTTTTGTTTTGCTAGAAGACGGATTTCTCCTGCAGCGGATCTTTGGTCTTCAGGGTGTTGCGATGTGAGCTTAAGTAGGAGTTCTTCAATCTTGTTATGTTCATCATCAGGGGTTGAGGAGGAAGATGAGGCTTTACTACTCGGTTGAGAATTGTTGGGACGCTTTGGAGGTTCGATGCCATTAGACTCACACCATTGAGCTATAAGGCTTCTTAGAACATAGTTTGGTGTGACGGTATCACTTGTCAGCGTTTCTTGCGTCTTTGGACACGTCAAGTGTCCTCCTTCAAGCCACTTCTTAATGCACTCACGTTCATATGTCTACACAGGATTCCGACGAGACCAGTCAATAAAACTGGAAATGAATTAAAAGACACGTAAAGGGAGTAATGCTTTTAACAATACCTGCCCTGAAGAAACAATAACTGGATCCGTCATCAATTCTAGAGAAATTGGACAACGGAAATCTTCAGGCGGCACTGGCCTATCCTGATCTCCATCTTGTAACTTCGGAAGCCTTGATTTCAGTCTCATCGGAGCATCATCCAAGTTAGGATTATCAGTTTGCACAAAGTCCTTAATCTTCTTGAGAACCATAGACATCTTCTCAAAACTTTCACCAGGATCTCCACCACTAGAACTAACCATATCAAGTAAAGCTAATGACTCTTGCGTAAGGTCAGTTATAGTCATCAACTGAAGCTTCTCCGCCACACTCCTAAGCATGTCAGACTCCGTTACACTGCCTATGTCACTGTAAAGAGATAAAAGATCCCTGTATAACTCATCATCATATACATCGCCGCCTTTTCCTATCGCTCTTCTTAACTGAACTAAAACAAGCTCAACCTACAACAAGTAATGAACCCGAAAAGCTGAAGTTCAAGAAAAAGAAAACGTAAAAGAACAAAGCAGAGCAGTGAATGTTTTAGTACCTGTTCTTTAAGTTCATCTGAAATTTCAAGATTCTCATAAGGGATTCCACTTAAAGCTTGTTCCAATAGAGCCGTCACTTTCTGAAATTTAACCATCACTTGGTCTCTCTCCAACACCTAAACGAATCATTAGATTACATATTAAAGATTCATGGAGCAAACAATGGCATGAAAAACTTATAAATAGCAAAATCTCCAAAATTATCAATTAGAATCAAGTGTTAAGTCCACTTGACTCCACTTTTCCTAACGGAGTTCAGATTCCACTAAGTCGCGTTACCATGCGAGGTAGAGATTGGCTATGGATCGGACCTTGTCGAATCCAAAAAAAAAAAAAAAAAAACCCACAACCGATAGATTCAGTTTCAAATTCAATTTCAAATCCAACTACACATACAGATCTGAGCATCAACATCAATTCGCAGAAATCTCAAAATCAAAAACAGGTTTATAGATTCGAAATACTCACACACCAGATAAATTTTGCTAACTTGGCTAACGAAAGAAAGCAAATCCTTAGCAGGAACAAGCGACTCCTTAAGAGATAACAAAGCCTTCACAACTTCCGACGACGATTCTTGATTGTCTCTGATCTCTTCCAACATAGGAATAAGAAGCTTCAATCGCCGAGAGAGGTTTCCGCAGTGCTTCTTCATCGGTGTGTGGTGATCGGAAATTGAAGCGATCTCGTTTATTGAATCGATTAAGGTTTGCGCTAACTTGTGTTTCTCTGATTTCGCCAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_4000727
ATGGCGAAATCAGAGAAACACAAGTTAGCGCAAACCTTAATCGATTCAATAAACGAGATCGCTTCAATTTCCGATCACCACACACCGATGAAGAAGCACTGCGGAAACCTCTCTCGGCGATTGAAGCTTCTTATTCCTATGTTGGAAGAGATCAGAGACAATCAAGAATCGTCGTCGGAAGTTGTGAAGGCTTTGTTATCTCTTAAGGAGTCGCTTGTTCCTGCTAAGGATTTGCTTTCTTTCGTTAGCCAAGTTAGCAAAATTTATCTGGTGTTGGAGAGAGACCAAGTGATGGTTAAATTTCAGAAAGTGACGGCTCTATTGGAACAAGCTTTAAGTGGAATCCCTTATGAGAATCTTGAAATTTCAGATGAACTTAAAGAACAGGTTGAGCTTGTTTTAGTTCAGTTAAGAAGAGCGATAGGAAAAGGCGGCGATGTATATGATGATGAGTTATACAGGGATCTTTTATCTCTTTACAGTGACATAGGCAGTGTAACGGAGTCTGACATGCTTAGGAGTGTGGCGGAGAAGCTTCAGTTGATGACTATAACTGACCTTACGCAAGAGTCATTAGCTTTACTTGATATGGTTAGTTCTAGTGGTGGAGATCCTGGTGAAAGTTTTGAGAAGATGTCTATGGTTCTCAAGAAGATTAAGGACTTTGTGCAAACTGATAATCCTAACTTGGATGATGCTCCGATGAGACTGAAATCAAGGCTTCCGAAGTTACAAGATGGAGATCAGGATAGGCCAGTGCCGCCTGAAGATTTCCGTTGTCCAATTTCTCTAGAATTGATGACGGATCCAGTTATTGTTTCTTCAGGGCAGACATATGAACGTGAGTGCATTAAGAAGTGGCTTGAAGGAGGACACTTGACGTGTCCAAAGACGCAAGAAACGCTGACAAGTGATACCGTCACACCAAACTATGTTCTAAGAAGCCTTATAGCTCAATGGTGTGAGTCTAATGGCATCGAACCTCCAAAGCGTCCCAACAATTCTCAACCGAGTAGTAAAGCCTCATCTTCCTCCTCAACCCCTGATGATGAACATAACAAGATTGAAGAACTCCTACTTAAGCTCACATCGCAACACCCTGAAGACCAAAGATCCGCTGCAGGAGAAATCCGTCTTCTAGCAAAACAAAACAACCATAACCGAGTCGCCATTGCTGCATCAGGCGCGATCCCTCTTCTGGTGAATCTCCTCACGATATCCAATGACTACAGAACTCAAGAACACGCTGTGACATCGATTCTTAATCTCTCGATATGCCAAGAGAACAAAGGAAGGATTGTTTATTCATGTGGAGCGGTTCCAGGTATTGTTCATGTGCTCCAGAGAGGCAGCATGGAAGCTAGAGAAAACGCAGCAGCTACACTTTTCAGCCTCTCGGTTATAGACGAGAACAAAGTGACAATAGGTGCCGCAGGAGCGATCCCGCCTCTTGTGACCTTGCTGAGCGAAGGATCACAAAGAGGCAAAAAAGACGCGGCGACTGCTCTGTTCAATCTCTGCATATTTCAAGGGAACAAAGGAAAAGCTGTGAGAGCCGGTTTAGTGCCCGTGCTAATGAGGTTACTAACAGAACCCGAAAGTGGAATGGTTGATGAAGCACTCGCTATATTAGCCATACTATCCAGTCACCCGGACGGGAAATCAGTGGTTGCTGCCGCTGATCCAGTTCCGGTTATGGTAGATTTTATCAGAAACGGGTCACCGCGAAACAAAGAAAACGCAGCTGCAGTATTAGTGCACTTGTGTTCATGGAATCAGCAGCATTTGATTGAAGCTCAGAAATTAGGGATTATGAGTCTTTTAATAGAAATGGCTGAGAATGGTACTGACAGAGGAAAACGCAAAGCGGCACAGTTACTTAACCGGTTTAGCCATTTTAACGACCAGCAGAAACAACAGTCCGGTTTAGGTGTGGAAGATCAAATCTCTCTAATCTGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_4000727
MAKSEKHKLAQTLIDSINEIASISDHHTPMKKHCGNLSRRLKLLIPMLEEIRDNQESSSEVVKALLSLKESLVPAKDLLSFVSQVSKIYLVLERDQVMVKFQKVTALLEQALSGIPYENLEISDELKEQVELVLVQLRRAIGKGGDVYDDELYRDLLSLYSDIGSVTESDMLRSVAEKLQLMTITDLTQESLALLDMVSSSGGDPGESFEKMSMVLKKIKDFVQTDNPNLDDAPMRLKSRLPKLQDGDQDRPVPPEDFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDTVTPNYVLRSLIAQWCESNGIEPPKRPNNSQPSSKASSSSSTPDDEHNKIEELLLKLTSQHPEDQRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDYRTQEHAVTSILNLSICQENKGRIVYSCGAVPGIVHVLQRGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDEALAILAILSSHPDGKSVVAAADPVPVMVDFIRNGSPRNKENAAAVLVHLCSWNQQHLIEAQKLGIMSLLIEMAENGTDRGKRKAAQLLNRFSHFNDQQKQQSGLGVEDQISLI