Information report for fgenesh1_pm.C_scaffold_4000434
Gene Details
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Functional Annotation
- Encodes a poly(A) polymerase. Located in the nucleus.
Homologous
- Arabidopsis thaliana: AT2G25850
- Brassica napus: BnaC04G0469100ZS, BnaA01G0050100ZS, BnaC01G0058800ZS, BnaA04G0171600ZS
- Brassica oleracea: Bo4g158830, Bo1g009880
- Brassica rapa: Bra034276
- Gossypium hirsutum: Gohir.D07G024800, Gohir.A07G022233
- Populus trichocarpa: POPTR_006G235400v3
- Prunus persica: PRUPE_1G444600
Gene Resources
- Pfam: PF01909 PF04928 PF04926
- UniProt: D7LC01
- EMBL: GL348716
- AlphaFoldDB: D7LC01
- KEGG: aly:9314964
- InterPro: IPR007010 , IPR007012 , IPR011068 , IPR043519 , IPR048840
- PANTHER: PTHR10682 , PTHR10682:SF31
- SUPFAM: SSF55003 , SSF81301 , SSF81631
- Gene3D: 1.10.1410.10 , 3.30.460.10 , 3.30.70.590
- OrthoDB: D7LC01
- CDD: cd05402
- eggNOG: KOG2245
- STRING: 81972.D7LC01
- HOGENOM: CLU_011511_4_4_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_4000434
CACACTATGGACTTCAAGCTCAACCTCCTGCTGCTATAAAAAGTACCAAGAAAACCAAAACAAGAGCATAAAGAGATCATGATTGGCAAAAAAAGCAGTAATGGGTTGCAAAAACACATACCTCATCATTGCATTCTGCAAAGATTCTGACCTAGCTCCATCGTCCAGCTTCCCCATCCCGCTGAGCAAAGGATTTGACTAAGACACAAATAAAATATACAAGGAGACAAGTCAGAAGTGATCTGGAAAGAGAAAAGAACCTAGTTTCAAAAAGTATGAAATAATACAGAATAAAGAATGGCAGTGCAGGACCTGTCAATGAAAACTGATGGAAATATTTCAGAAAAAGATGGAGAACATAAAATTGATCACTTAAGTAGCACAACATTCTAATTTCAGCTTGTTATCTCATATTTTTTGATTCAAAAAATAAAGCACAAGATCACCCTTCAATATGTCATGCAGTGAGTGTGAATTAAAAACCTGAAGTTCTTCTGACAAGCCACTTTTGAACAATCTGTCTGCATGCAAGTTTCTATGTTCCACAGCTGAATCCAAATTTGCAGGAGTCAAAAAACCCTGTAACAACCCATGATCACTAACAACCCAGTACGTTCAAGACATTTCGCCAATTCGTTTACAATATTATCATCGAACAGCAAAAACTCACCTCATGATCAAGGTTCCGCCCACAGTATCCATTCCACAAAACACCATCAGCAATTTCTCCCGACTTGGCTTCCCTCTCAACTTCATCAACATCTTCTTTTACATTAAGTCGCCTTGGAAGATGTTGTGTGGCAGTGTCATTAATAGATTCAGAGCCCATATCACGACCTATTTCTTTATTCTGCCAACCTTCACATGCTAGCACAGCACGAGGGTCAGGTCTCACATGTTTTCCTACAGGCTCAGCCAGACCATGATAACCTTGAACTAGAGCCCTACTATCTACTTCCAGGATTTGCTCGCAACCGGAGTTATGCTCATATTGAGAAAATTTTATGAGTTCCGTGCTTTTACGGATAAATTTTTCAGCCTCGACTTCCACGTTAGGAAGACTTCTAACATTGCAAACAAGATCACCAGTTACTAAGCATTCAGCTCTAGGACCTGGCGCAATGCCAATCTGAGGAGTCTCACCAGTAGTGATACCACTGCTGACAGGAGAAACTGCATCCAGACTATGTGGACTACGAGATGCACGCTTCTCACGTTTCTCTGGCCGGGTATCCATAGTTTCATTATCATTCTTTCTCTTCGCATATCCATCAACAGAGTCGGACAAAGAACCAACGACCCCCTCACCAGGTTCTCTGCATTGTTGATTCTGGTGCCTTGACTGCCGAGGCCTTTTATATCCCTTTGGGAAAACAAAAGATGGAAGCTGCCGTCTTCGAACATGAGAAACATACACATCCATCCCAGGTCTCCAAAACATATACATGTTTACTTCTTGCCTGAACTCGTCCACTGTTCCACGTATATCGAACTGTTGACATTCTTGGCCACCAAATCCTTCTGCCCTCTGCAAGCCCATGAAAAAGGCACAATGTCGAAACTTCTTCGAAGTGTCTACATACTCATTTGGTTGAGGGTGGCACATTAACATCCCATTTGTGTCTCGTTCTATCTGCATTATTGGATTAAAAAAGAGAAGCAGAGAAACCTTAGATGATTATTTATTCTACCAGTAAAAAAATTGAAGAACACACTGGAGACACAGAATGTGTACTCCTCAACATCAACTGAACTTAAGGCTATCTACCTTCAAGGTCAATTGCCTGAACCGTGACTCCACCCAACCTTTCCATGCCAATAAATCTTCGGCATCTAATGCTAGTACATCAACCTGAAGGTAGTTTTTATATGCCTCAAAGAACATATATTGCTCAAATAAGGAACTCCATTGTTGTTTATTTAGCTCAATCTCCTGCATATAAAAAATTACTTAGCAACGGGATCCTGGGTAAACTTTTCATAACAAAATCAGGTGTTATACTTCCTAACCTGACAGATCGTGTTGCCAAACTGGAATTGCTCTGTCATAACACGAAGTGTGCTTTGAGAGACATTGTAACTAGAATTCATGCATGGGTATGCAGGAGTTATTATTGGCATAAGATGATAGCGGTCACGATGATTTTTCCGTGGGTCCCAGACAGGAAAGCTAAGCTCATCTTCTTCTATTGTACAAAGCATGACTGGATTCGGCCAGCGCCATTGTATATATACTCTAAAAAATCGCGAAACCAACATACTAGGAATAGCATTTGGATAAAGCTGGCACAGGCGTGCAACCAGAAGTGCCCAGTTTACACCACCAAGAAATCCAGTAACCTGCTCAATATAACAGGGATTACAAAAGCTTTAACCTAAAAATATTGTCAACAGATGTGATATTCAGAAAGACACCACCTTACATTTGAATAGACCCCACGCTTCTTAGCCCAGTACTTCAGGCATCTTAATGTTGTCCGGAAGTGCTACATTTGCACATAACATAAGAGATGGCTTACAGGATTCATTAGTTTATAACAAAAAAAAACTGGCATTCAACGACTTTACCTCGGAATTTGGAACGAGTTTAAGAATCTGATCAGCAACCCTACAACCATTAAGACTGCGGACAGTTTGTTCATCCACGTCACACAGCACAGAAGAGTTGGAGATATCCAGATCCTGTTAATAAATTGATTCCAGAAAATAACAGGATCTGACTCAGTAAGAATTTATAAACTTTGGCGAGAACTCAGCTCAATACTCATATATAAATCAAGCCTGACAGCGCTAACACAGCAGTTCTAGATCTCCATGTTCACTAAGGCTAACAATTTCTGTATAGAAGTTTCTTTGATATCTTAACCTTTGGGTGATGTGTATAATACTATGTGATCATCAACATACAATACACACACCAAACCCACCAAACGAAATCCAAGATAACATAAAGGTATCGTGAACCATCCCCTAAGTTTCAACAGAAACTGAAAAAGGCTATATTGATTACCTGTGGGATAACTAGAAGTGATATGCTAGCATACAGAAGATCAATCGATATTCCTTGGAACTTAAATTTCATGACTGGGACATGGGCATCAGTAACAGGTTGAAGTTCAGTCACTTCTTCCATTTCAGCCAACATATCACGCAAGATAATGAAGAAATCCTCCTATAAAATTAACCTGTTAGCAACTAAACTACACACCAGACCTTTACATCAGTAAGACGTAATTCAATAGTTACCTCTCGGTTAACATAAGATGGGCCAACACACAAAGTATCAATATCAGCCCTAGGTCCGTGAACCTGCAAGTCAACAACATAAAAAAATTTCACCCTCAAATACAAGTAATGTAGAGACGAATACAATGTTACTTCTCTTGATTTCAGTGATATTCCCAAGGCTCAACAGAAAATACATGATCCAAGTTACCCATAACCTTTTGCTAAACAGATAAGATAAAGTTAAACTAAAACTTAAACTTACTCCAAGGCGGTAAGATCCAAAAGTGAAAATGACAGCATTTGCATCGTCCACCATCTGATCTGTATAGCCCCTCTGACGAGTTAACTGTTTCACCCAGTGTTTTACAATCTACACAAAAAGTTTGAAAAAAAAGATATGTTAGATGAGCCAATAGACATAGAAGGCCTACACTACATAATTATCAATTTCCACATAGAAGTCTTAGCCTAAACACTACGAAAAGAAAAATGAGAGAACAAGTCTTAGCATTATCATCATCATGAGAAGACAGTCAACAAAACACGCTTATTCACCTGATCAATGCGCACCAGAACTTCCTCTCTCCGCATAGTTTCTTCCTTGCTCTCATAGAGCCCCTCATCAACCAGAAACTTCACAATAAATCAGCCAAAAACGCATTGTTCCTAAAAACAATTTTCCATTGGAAATAAAAACACAAAGCTACCTTCTCTAGTTCCAAATTACGCTTAACATCAGCGGCACAAGGACCAGCAATAGAAAGTGGCTTCGTGATTCCATAGGTCTTAAGAGCTTTTACCACCGGTGGAGAAGAGCCATCGTCCGTGCGTTGTTGAGTACTACTCACCAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_4000434
ATGGTGAGTAGTACTCAACAACGCACGGACGATGGCTCTTCTCCACCGGTGGTAAAAGCTCTTAAGACCTATGGAATCACGAAGCCACTTTCTATTGCTGGTCCTTGTGCCGCTGATGTTAAGCGTAATTTGGAACTAGAGAAGTTTCTGGTTGATGAGGGGCTCTATGAGAGCAAGGAAGAAACTATGCGGAGAGAGGAAGTTCTGGTGCGCATTGATCAGATTGTAAAACACTGGGTGAAACAGTTAACTCGTCAGAGGGGCTATACAGATCAGATGGTGGACGATGCAAATGCTGTCATTTTCACTTTTGGATCTTACCGCCTTGGAGTTCACGGACCTAGGGCTGATATTGATACTTTGTGTGTTGGCCCATCTTATGTTAACCGAGAGGAGGATTTCTTCATTATCTTGCGTGATATGTTGGCTGAAATGGAAGAAGTGACTGAACTTCAACCTGTTACTGATGCCCATGTCCCAGTCATGAAATTTAAGTTCCAAGGAATATCGATTGATCTTCTGTATGCTAGCATATCACTTCTAGTTATCCCACAGGATCTGGATATCTCCAACTCTTCTGTGCTGTGTGACGTGGATGAACAAACTGTCCGCAGTCTTAATGGTTGTAGGGTTGCTGATCAGATTCTTAAACTCGTTCCAAATTCCGAGCACTTCCGGACAACATTAAGATGCCTGAAGTACTGGGCTAAGAAGCGTGGGGTCTATTCAAATGTTACTGGATTTCTTGGTGGTGTAAACTGGGCACTTCTGGTTGCACGCCTGTGCCAGCTTTATCCAAATGCTATTCCTAGTATGTTGGTTTCGCGATTTTTTAGAGTATATATACAATGGCGCTGGCCGAATCCAGTCATGCTTTGTACAATAGAAGAAGATGAGCTTAGCTTTCCTGTCTGGGACCCACGGAAAAATCATCGTGACCGCTATCATCTTATGCCAATAATAACTCCTGCATACCCATGCATGAATTCTAGTTACAATGTCTCTCAAAGCACACTTCGTGTTATGACAGAGCAATTCCAGTTTGGCAACACGATCTGTCAGGAGATTGAGCTAAATAAACAACAATGGAGTTCCTTATTTGAGCAATATATGTTCTTTGAGGCATATAAAAACTACCTTCAGGTTGATGTACTAGCATTAGATGCCGAAGATTTATTGGCATGGAAAGGTTGGGTGGAGTCACGGTTCAGGCAATTGACCTTGAAGATAGAACGAGACACAAATGGGATGTTAATGTGCCACCCTCAACCAAATGAGTATGTAGACACTTCGAAGAAGTTTCGACATTGTGCCTTTTTCATGGGCTTGCAGAGGGCAGAAGGATTTGGTGGCCAAGAATGTCAACAGTTCGATATACGTGGAACAGTGGACGAGTTCAGGCAAGAAGTAAACATGTATATGTTTTGGAGACCTGGGATGGATGTGTATGTTTCTCATGTTCGAAGACGGCAGCTTCCATCTTTTGTTTTCCCAAAGGGATATAAAAGGCCTCGGCAGTCAAGGCACCAGAATCAACAATGCAGAGAACCTGGTGAGGGGGTCGTTGGTTCTTTGTCCGACTCTGTTGATGGATATGCGAAGAGAAAGAATGATAATGAAACTATGGATACCCGGCCAGAGAAACGTGAGAAGCGTGCATCTCGTAGTCCACATAGTCTGGATGCAGTTTCTCCTGTCAGCAGTGGTATCACTACTGGTGAGACTCCTCAGATTGGCATTGCGCCAGGTCCTAGAGCTGAATGCTTAGTAACTGGTGATCTTGTTTGCAATGTTAGAAGTCTTCCTAACGTGGAAGTCGAGGCTGAAAAATTTATCCGTAAAAGCACGGAACTCATAAAATTTTCTCAATATGAGCATAACTCCGGTTGCGAGCAAATCCTGGAAGTAGATAGTAGGGCTCTAGTTCAAGGTTATCATGGTCTGGCTGAGCCTGTAGGAAAACATGTGAGACCTGACCCTCGTGCTGTGCTAGCATGTGAAGGTTGGCAGAATAAAGAAATAGGTCGTGATATGGGCTCTGAATCTATTAATGACACTGCCACACAACATCTTCCAAGGCGACTTAATGTAAAAGAAGATGTTGATGAAGTTGAGAGGGAAGCCAAGTCGGGAGAAATTGCTGATGGTGTTTTGTGGAATGGATACTGTGGGCGGAACCTTGATCATGAGGGTTTTTTGACTCCTGCAAATTTGGATTCAGCTGTGGAACATAGAAACTTGCATGCAGACAGATTGTTCAAAAGTGGCTTGTCAGAAGAACTTCAGTCAAATCCTTTGCTCAGCGGGATGGGGAAGCTGGACGATGGAGCTAGCAGCAGGAGGTTGAGCTTGAAGTCCATAGTGTGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_4000434
MVSSTQQRTDDGSSPPVVKALKTYGITKPLSIAGPCAADVKRNLELEKFLVDEGLYESKEETMRREEVLVRIDQIVKHWVKQLTRQRGYTDQMVDDANAVIFTFGSYRLGVHGPRADIDTLCVGPSYVNREEDFFIILRDMLAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEAYKNYLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKRASRSPHSLDAVSPVSSGITTGETPQIGIAPGPRAECLVTGDLVCNVRSLPNVEVEAEKFIRKSTELIKFSQYEHNSGCEQILEVDSRALVQGYHGLAEPVGKHVRPDPRAVLACEGWQNKEIGRDMGSESINDTATQHLPRRLNVKEDVDEVEREAKSGEIADGVLWNGYCGRNLDHEGFLTPANLDSAVEHRNLHADRLFKSGLSEELQSNPLLSGMGKLDDGASSRRLSLKSIV