Information report for fgenesh1_pm.C_scaffold_4000157
Gene Details
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Functional Annotation
- Encodes a MADs domain containing protein involved in promoting flowering. Loss of function mutations show delayed flowering in long days and reduced levels of LFY and AP1 expression.
Homologous
- Arabidopsis thaliana: AT2G22630.1, AT4G37940.1
- Brassica napus: GSBRNA2T00032893001, GSBRNA2T00149769001
- Brassica oleracea: XP_013603502.1, XP_013634720.1, XP_013634719.1, Bo4g149900, XP_013589012.1
- Brassica rapa: XP_009117344.1, Bra039921, XP_009140371.1, Bra030222, XP_009131941.1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: D7LE25
- EMBL: GL348716
- AlphaFoldDB: D7LE25
- KEGG: aly:9316521
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: D7LE25
- SMR: D7LE25
- CDD: cd00265
- eggNOG: KOG0014
- STRING: 81972.D7LE25
- HOGENOM: CLU_053053_2_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_4000157
TGGGGAGAGGGAAGATTGTGATCCAGAAGATCGATGATTCAACGAGTAGGCAAGTCACTTTCTCCAAAAGAAGAAAGGGTCTCATCAAGAAAGCTAAAGAACTCGCTATTCTCTGCGACGCCGAGGTCTGTCTCATCATTTTCTCCAGTACCGACAAGCTCTATGACTTTGCCAGCTCCAGGTTTCTATCTTCCTTTATCAAATCTCTAGATCTTTTAACATCTACATACCTATAGGTATACATGTATCTATGTATATGTATATCTATTAATAAGTGGAAGTATATGTATGTACTTATATATAATATCATGTATGGGTTTTCTTAGAAGGGTTGGATTAACTCAATGATTTGTGTTTAGTTGTGTGAATTACTCATTTATAGTATACATACTTCTGCATCTTGTGTCGATCGATATAACGTTTTATATTTCACTATATATATACAAGGTGGTGTATGTATGTGTAGCTCAGAAAACTTAATATTTTCAAAGGAAACTTAGTTTGAGCTTAGGATTCCAAAGAAAAAAATAAAAAGTAATTAGAGACGATGACTAGTTTTAAAGAAGAAGAAAACACTAATTTGAAGTAGGATCATGGTTTATTGTGTGTGTGTGTGTGTGGACATGTGTGTGGACATGTGTGTCATTGGTTGTAAATTGTGTATGTGGACTGACAGTGTGTCTTTGCCAAATTTAGAAACATTTGAGGAGTAGAGGAGATAGTAATAAAAGCTAAAAACAAATAAAACGTTGGAAAACTAAAAGAGTGATAGATGGAGAGTATAAATCTCAATAGTTTGTAAAACAAAAATCCATTTGGAGATGATATGTAAAATGATAATTTATTACTCATGTACATGTATATATGAATATAAATCTCAATATTTTGTGTATATCAAACTACACCAGAACGACTAGATGACTCTGTATTTCTAATCTTATCTGATTGTAAAATTTATCAAAAAAAATTTCATTTATAAGAAAACAAACTCATTATTTACAGGTTTCGGATTTTCCACATGTGAATCATATATTCATATTTATTTTTGAAGATCAAATTTTCTCGTATGTAAAAGAATATGGTATATATATATATATATGGAACTTAAATGATCGTGAATACCATTTATGAATGATAAATGCCTGACCTTTTTAAATTATCATGAATATCATTTTTTTCTTATGTAATAAAATCTTAAACCTTTTTAGATAATTTTAGAGATTGTGAAAATTTATCGAGGAAGTGAAGGATTTTTTTTTTATTAGCAATGGAAATAGAAATATTATTTTCCTACAAGGAAACAAACTGCACTATGAACTATTGGTAAGTTAAAAATCTTGAAATGAACAGTGTGAAATCTACTATTGAACGATTCAATACGACCAAGATGGAGCAGCAACAACTACTCAACCCTGCATCAGAAGTTAAGGTACGTACGTATAACAGAAATCACACATCACATATAAAACAGGAGAAGGCAATTATATATACTAATTAAGATTTTAATTAATCATGTTTGTATTATTTAATTACTTGATTTCGAGAGTTGATGAGTTAGATTGTGTTGCTTATTGTAGTTTTGGCAGAGAGAGGCTGAAACTCTAAGGCAAGAATTGCACTCGCTGCAAGAAAATCATCGGTACGTATTTGCTTACAAACTAAAAAACTGTTAATAATCATGCGTTAATTCAAAACTAGGAAATACTTAGTGAATTAATTGTATCTTATATACTATTGTTGATCTTTTCTCACTTGATTTCTAGCTAAAACTTTTCTCTCTTTAATTATTTTTGCTTAAAACTAATGTTCGGCTAAAATTTTGCGGATTAATTAACATATATATATATATATATATATATATATATTCTTCTTCTTAGAGTTACTTGTTTGTGATAATTAATATTCTTATATACATTTAGACAAAAACAGCCAGTTACATATACAGGTAACAAAATGGATGTTATATATGCTACTAATAAATTACTATTTTCTTAGAAATGCATATATATCTTATCAGCTAGATTGGAGAAAACGGATTAATAGGAACCATGATCGAGAGAGAAAACATGGTGAAAAACTCAATTTCTCATTAATGATCTGATTGTTACAACAATTATAGTCAACAGACTCAACTAAACCAGAAATAACCAAAGAGATTCACCTTAATTAGATGAATAAACCGGACTATACAGAGCCCTTAACCAAGCCTATTATATACAAGTATAGACTATAGTATGGAAACTATATACACTCTAATAGCCTCCCTCAAGATGGCAGTGGGGCAAAGATGTTGCACACTCCCATCTTGCCTGTTAGTGCATGAAACTGAGCAGGATAGATAGGCTTTGTCAAAGCATCAGCTAATTGATCTTCAGTAGCCACATACATGGTTTTAAGAAAACCTGATTCAATCGCCTCCCTCGTCTTGTAACAATCAAGCTCCACATGCTTAGTACGCTCATGGAATACTGAATTGTTTGCAATGTGCAAAGCTGCAGTGTTGTCACAATAGAGATAAGCTGGAGGAGTGAATGGTACCATGAAGTCATCAAGAAGCCGTGATAGCCAAATCATTTCCTTAGTGCCCTGAGACATAGCACGAAATTCTGCTTCTGCTGTGCTCATAGAGACGGTTTCTTGCTTCTTTGATTTCCAAGAAACTAAAGAATCTCCAATAAACATACAGTAAGCAGCAACACAACGTCGAGAATCAGTACATGAACCCCAATCTGAATCTGTATAACCTCGCAAGTCAAAGTTACCATCTGCAGGATAAAAAAGTCCTTGACCTGCAGTACCCTTCAAGTATCTCAGAACCTTATGGGCTGCATTCAAATGTATATCCCTTGGATCATGAGAAAACTGACATAGAGTATTAACTGCATAAGCAATGTCAGGTCTTGTAATCTGCAAATACATCAATTTCCCAACAAGCTTGCGATATTGAGTTGAATCTTTCAGAGGAACACCATCTTCCTTGTTCAGTTTTACACTCGGGTCCAAAGGTATAGATGATGGTTTACTACCAAGAAAACCAGTAGTAGACAATAACTCCAGAATATACTTTCTCTGACAAATGGAGATTCCCTTAGCAGATCTTGCAATTTCTATACCAAGAAAATATTTAGCTGCTCCCAAATCTCTCAACTTGAAATAAGATTTCAACTCATCAGTGAACCTTGCCACAGCATCATCACTATTACTCACTATCATGATGTCATCTACATACACCAAAACTCCAAGAAACACTCCATTAGCATATTTAAGAAACAGAGTATGATCTGCATTAGACTTCTTAAAACCCATTCCCTTCAGAGTATTAGAGAGCTTAATGTACCATTGCCTAGATGCTTGTTTTAGGCCATATATGGACTTATGTAACCTACAAACAGCATTAGGAGGCAAAATTTCTCCACTTAGCTCAGCATAACCTTGAGGAATCTTCATATATATCTCCTCATCCAAGTCTCCATTCAAGAATGCATTAGAAATATCTAGTTGATGAACTGACCACTTCAATTTAGCAGCAAGCAACAACATCATTCTGACAGAAGTCAACTTAGCAACAGGGGAAAAAGTTTCTTCATAATCCAAACCTTCTTCTTGAGTATAGCCCTTAGCTACCAGACGTGACTTAAATCTCTCAATACTTCCATCCGCATTATGTTTGATTGTGAAAACCCACTTACAACCGATAGCCTTTTTATTTGGGGGAAGACTGCATATACTCCAGGTCCGAGTCCTAGTCATAGCACCAATCTCCTCTTTCATCGCATCACACCATGCCTTAAAATCTTTAGCTTCTGAATATCTTTGTGGGATAACAGCATTTGTGATATTATTAACAAAGGCACGAAAAGGCTCAGCTATATATGAATAAGAGATATAATTGTTCATAGGGTATAAGATATTACTAGTAATAGTATAACAATGAAAATCCTGCATGTGTTTTGGGGGTTTCTTTTGGCGTTTAGACTTTGGTTCAGAAGGAACCAGAGCCTGAGAAGATGACACATCTTGAGGTGGATGTGCATCAGGAATTGATGTTTGCTCAAGAGGCAAATCATCGGTTAGGGCAAGCAACTGTAATAGAGGAAAGAAATCTTTGATATCATCCTTGATAGTAGATGATATGAAAGGAAAAATATCCTCATGAAAAATGACATGTCTTGAAATAGAAACAGCATGTGTCTCTATATTTAATAGCTTGTACCCTTTGTAACCTAGAGGATATCCTAGAAACACACATGCTCTAGCCCTAGGTTCAAATTTATGTCTATGCTTAGGAGAAGTAGAACTATAACACAAACATCCAAAAGTCTTTAAAGACTCATAGGTAGGAGGAGTGTTTTTAAGCTTCTCATAAGGAGACTTATTATCTAAAACAGGGGTAGGCAATCTATTTATCAAAAATACTGCTGTTAAAACACAATCTCCCCAGAATTCTAAAGGTATATTGGACTGAAATAACAAGGCTCTAGCAACATTCAAGATGTGCTGATGCTTTCTCTCAACCACGGAATTCTGTTCAGGAGTTTCAGGACATGAATGATATGCAACAATGCCATGTTCAGCAAAAAAATCTTTAAATTTTAATTCATGTGCATTGTCTGATCTAACCGATTTTAATTTGGTCTGATATTGTGTATGAACCATATTAACAAAAGTAGGAAAAACATGTGAAACATCTTATTTGTTCTTTAATAGATAAATCCAAGTGGCTCTACTAAAATCATCAACAATAGTGAGGAAATATTGAAAACCATCTTTAGTAGGAACAGAGAATGGACCCCAAGTATCTATATGAACTAAATCAAATGCAGCATTACACATATTCTGTCTAGATTGAAAGGATAAATGCTTTTGTTTTGATAAATGACCAACATGACAAACATGAGAATGTTCTTTATTTATCTTCTTATCTTTAATATTCAACACATCAGACAACAAATCGATTTTAGAATAAGCAGGATGACCTAATCTCTTATGCCATGTAATAGAATCAACAACAACAGAAGAACAAGTAGAAAATTCAGGACACATAGAATTGGTACCTTTTAAAGACACAGAATGATTATTTTCATTGAAATCCAGAACATAAAGATTCCCAACTTGACTACCTTTACCAATCATCAACTCCTTTGTAAGTTCCTGAACAAAACATGCATCAGATGTAAAACTTACTTTTGATTTTAAAGTCTTTGTAAGAACACTAACACTGATCAAGTTGAATTTGAATTCAGGAATAAAAAGCACATTGTGGAGAGAGATTGCATCAGACAGTTGAATGAATCCTATGCCTACTATCTTAACTGTACAATCATTGGGAAGTTTAACAAAGGTATTTTCTAGGGACCTAAATTCTAAGTAAAGGTCTCTATTGTGTGTAACATGGTGAGTGGCTCCTGAATCTATTACCCAAGCTCTAGGAGACACAGCTGGTTCTCGAGATATAGATGAAACGAGCATGTCATAATAAGCATTAGAGTAAAGTGCCAGAAATGTACCTGAGATCTGTGAGATCATAGGTACAGAGGGTGTTGCAGAAGTCGAAGCAGAAGATGTAGTCGGCAGTGATGTGGAAGATGGAGTGTGAAGCTTGGTACTAAGATAAGAAATCATAGTCTGAATCTGATCAGTCGAGAATTCCTCACAATAATCTGTCTTCTCACTTGGTGAATCATTCACAGGCTGTGTTACTGCAAGATTAGTAGTACCAATGGTCTGTGCCTTCTTCCACTTTGAACCAGGTGGATACCCATGCAGTTTATAACACTTGTCAGCCATATGACCAAGTTTATGACAGTTAGAGCACTTAGGTTTCTGATAAGAACCATGAGCCAGATTGACTTGAGATTGATTAACAGGGGAAGCTTGGATCTGGAATGCAGCAGTAGGATTAGACAAAGCAGAACTCCCAACAAGACGTTGGCTCTCATCTTGATCCAGCATATTATAAATCTCAGTCAAGCCTGGACGTGGCTTCATATTCAGAATTTGACCCCTAATGTGAGCAAAATTATCATTTAATCCCATAAGGAATTGGATAATACGACTAGTCTCAGCCTCCTCCATCAACTCCTTGACATGCTCACAATTACACTTCTTCACAGTGAGAAGTCTAGTATTAGCTAGCTGTTCCCAAAGTGTCTTCTTCTTCGTGTAATAAGTGGATAAATCTAAGTTTCCTTGCTTCAGAGTGTGAATGGATTGTTCAAGCTGATACTTCCTTGGAAGATTGCTCACTCTGAACCTCAAGAATAGATCATTCCACATTTCAACCGCATCCTCATAGTACAAGATGCTATCATAAATCTCCTTACTCACTACATTCAACAACCAAGCTTTAACCATGCTATTGCATCTACTCCATATCTTGAACATTTGATCATTAACATCAGGCCTAGGAAGAGTTCCATCTACAAAGCTCAACTTATTCTTTGCATCTAACTCATTCGCATAGCTATCGACCAATTGTTATAATTCGATCCATCAAGAGTGTGAGAAACAATGCTCAGACCTGGATGATCTGATGAGTGAAGGAAGAACGGACTATGCGCGTTGTCGTATGCTTCAATCGGTGCGGAATTTGACTGATAACGATCGCGATTAGCCGTAATCTTGAGAGGCGGAGTCTCATCGACGTCATCGGCAACTGGAAATGAAGATCCAGCTCGAGTCTTCATCGGTGAATACTCCGATGTTGGAGAATTACTCCGATTCTGCGTTTTCTTCTTCTGTTTCGCCATCGGAAGTGAGATCGAAGCTCAAATGCGTGATTGAAAGTGAAATCGAAGCTTCAGAAGGTGATTCTGATCCGTTCAAGTTCAAATCAACGCATATCTGGAATCGATTCAGTGATTAAACGGTGGAAAACGAAGAAAAACGAAGAAATCAATGAGAAATCGAAGAGAAATCAGAGAAGCACGAGCAAAAAATGCTCTGATACCATAATAGGAACCATGATCGAGAGAGAAAACATGGTGAAAAACTCAATTTCTCATTAATGATCTGATTGTTCTGTTACAACAATTATAGTCAACAGACTCAACTAAACCAGAAATAACCAAAGAGATTCACCTTAATTAGATGAATAAACCGGACTATACAGAGCCCTTAACCAAGCCTATTATATACAAGTATAGACTATAGTATGGAAACTATATACACTCTAATACGGATCATTAATCTTCGTAAGACTGCACCATTGAGATTACACCTTTGCAATTGAGATATCTTATTGGATAGATTGGAGAAAATGCTTTTTCTGTCGGCATGGGTCACTTATGGGATTAGTCGGGTGGATTAAACTGGTTGTACTTGACCATGTTTGTTCTATGTATATATATTAACTGCAGTAATCTTATGTAATAAAGCAGGCACCTAACGGGAGAGCAATTAAATGGTTTGAGCGTTAAGGAGTTACGCAATCTCGAGAGCCAACTTGAAATGAGTTTACGTGGAATTCGTATGAAAAGAGTAATATTGATACATATATGAATACTCTAATCTAGCTCGTTCGTCTTGGAGCATGATGCTTAAAGATTGATTATAGAGCAATGAAATTTAAACTAATAACTTTTTTTTGCACCTTGCAGGAACATATTTTGACCAATGAAATCAAAGAACTAACCAGAAAGGTAAACTATATGATATACACATGATTATGAATAATCAAACTCAAATGTTTTTGTTTGTGTTTACATGATAAAATCAAACACATTAAAATTTATTTTTTCTTTCATAAAAAGAATTCCTTACATATGTGAAATGGAAATGATAATCATGTCTTCTTTCTTCTTCGGTTCGTGATTGCATTTGCAATTTACGAAAAATCTGTTCTTTGAGAAAAAATACTAAAGATGTTGTGTATTAACTTTGAATGCACATGTAAATGTAAAACGCATAATCAGTGTTATCAATTCTAATTTTTCAGGCTTTTTTATAAGTGTTTTATCTTTTGCAGAGGAGTCTTCTTCATCATGAAAACCTCGAGATATCGAGAAAAGTGCAAAGGATTCATCAAGAAAATGTCGAACTATACAAGCAGGTAACAAAGAAACACAAACTTTATTACTTCAAGTTCCAGCTAATTAATCCTTTAAACAAAATCTCCTAGTTGAAAGTAGATAAATTATACTCTCTCCGTTTCATAATATAAGGCGTTTTGGATAACGTTTTTTGTTTCACAATATAAGCCGTTTTCGAGTTTCAATACAAATTATATATTATTTTAATATTTTATGATTATTTATATTATGCAGTCTCTTTTATGATTGGTTGAACTTTTAAAAAGTACTATGAAGAGTAGATCTTATTAATCGGCGTGTTTTTACCTAAAACAACTTATATCATGAAGTAGAGAGAGTAAAGAGTAGTTACAAAAGTTGTACTGTGGAATGATCTTGCAGGTTTATGCAACGTCAAACACAAACGGATTGGGACACCATGAGCTAGTGGATGGAGCCAATGAATCCCTTGTAGAGGTTAGGCTGCAGCTAAGCCAGCCTGAGCAGTCCCATTATGAGACTTCTTCAAACAGCTAA
CDS Sequence
- >fgenesh1_pm.C_scaffold_4000157
ATGGGGAGAGGGAAGATTGTGATCCAGAAGATCGATGATTCAACGAGTAGGCAAGTCACTTTCTCCAAAAGAAGAAAGGGTCTCATCAAGAAAGCTAAAGAACTCGCTATTCTCTGCGACGCCGAGGTCTGTCTCATCATTTTCTCCAGTACCGACAAGCTCTATGACTTTGCCAGCTCCAGTGTGAAATCTACTATTGAACGATTCAATACGACCAAGATGGAGCAGCAACAACTACTCAACCCTGCATCAGAAGTTAAGTTTTGGCAGAGAGAGGCTGAAACTCTAAGGCAAGAATTGCACTCGCTGCAAGAAAATCATCGGCACCTAACGGGAGAGCAATTAAATGGTTTGAGCGTTAAGGAGTTACGCAATCTCGAGAGCCAACTTGAAATGAGTTTACGTGGAATTCGTATGAAAAGAGAACATATTTTGACCAATGAAATCAAAGAACTAACCAGAAAGAGGAGTCTTCTTCATCATGAAAACCTCGAGATATCGAGAAAAGTGCAAAGGATTCATCAAGAAAATGTCGAACTATACAAGCAGGTTTATGCAACGTCAAACACAAACGGATTGGGACACCATGAGCTAGTGGATGGAGCCAATGAATCCCTTGTAGAGGTTAGGCTGCAGCTAAGCCAGCCTGAGCAGTCCCATTATGAGACTTCTTCAAACAGCTAA
Protein Sequence
- >fgenesh1_pm.C_scaffold_4000157
MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSSTDKLYDFASSSVKSTIERFNTTKMEQQQLLNPASEVKFWQREAETLRQELHSLQENHRHLTGEQLNGLSVKELRNLESQLEMSLRGIRMKREHILTNEIKELTRKRSLLHHENLEISRKVQRIHQENVELYKQVYATSNTNGLGHHELVDGANESLVEVRLQLSQPEQSHYETSSNS