Information report for fgenesh1_pm.C_scaffold_3002040
Gene Details
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Functional Annotation
- Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. Pseudomonas syringae type III effector AvrRpt2 stimulates AXR2 protein turnover.
Homologous
- Brassica napus: BnaA05G0331100ZS, BnaA03G0375100ZS, BnaC05G0350100ZS, BnaC01G0364700ZS
- Brassica oleracea: Bo3g081600, Bo5g093110, Bo1g103470
- Brassica rapa: Bra033886, Bra001900
- Glycine max: Glyma.10G180100, Glyma.20G210400
- Gossypium hirsutum: Gohir.A09G222400, Gohir.D09G224500
- Manihot esculenta: MANES_15G036200
- Populus trichocarpa: POPTR_008G161200v3
- Prunus persica: PRUPE_1G027600
Gene Resources
- Pfam: PF02309
- UniProt: D7L2J0
- EMBL: GL348715
- AlphaFoldDB: D7L2J0
- KEGG: aly:9319462
- InterPro: IPR003311 , IPR033389 , IPR053793
- PANTHER: PTHR31734 , PTHR31734:SF254
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: D7L2J0
- eggNOG: ENOG502QPNB
- STRING: 81972.D7L2J0
- HOGENOM: CLU_049393_1_5_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_3002040
TGATCGGACAACTTATGAACCTCAAGGCGACGGAGCTCTGTCTTGGTCTCCCCGGCGGCGCTGAAGCCGTTGAGAGTCCGGCCAAATCGGCGGTGGGAAGCAAGAGAGGCTTCTCCGAGACCGTTGATCTTATGCTCAATCTTCAATCTAACAAAGAAGGCTCCGTCGATCTCAACAACGTCGCTGCAGCTCCTAAGGAGAAGACTACCCTCAAAGATCCTTCTAAGCCTCCTACTAAGTAAGCTACACATCTACATATATATATATATATATATTTTAAAAAGTCTTAGAATATTTCAATCTACAGAGACATGTTTATACACATCTACATATATATACGTCTAAGTTCTTAGAAGATTTCAATCTATGTAGACATGTTTATACACATCTACATATATATAAGTCTAAGTTCTTAGAAGATTTCAATCTATATAAATTTCATAGTTATATATGTCCTCCAAGAGTACAAAATGTTGTGAGGGATTTCCATAAAACATACGAACAAACTAAAAGTTCTTAAAATTTGTAATGTTAAATATATATATATACTTCCCATATACATACACCTTTTTGTTTTTGGTTAGATTGTTTTATATGCATAACTTTGAAGTTAAATTTCTTTTCTCACAATATAATACTAAGAAAATAATATAATAATAATTAAAGAGTGGTTGATACTTAAACACCAATTCATACATGCGTACAAGCAAAAATGAAATAATACATCTTATAATCAAGCCAATATGGTCTGTAATGGTAACTAATAATTACATTGTTTGATTTACTTATGTATAAATAATACATTGTTTGATTTACTTATGTATAAATAATGTTATTATATGTAGAGCACAAGTGGTGGGATGGCCACCTGTGAGGAACTACAGGAAGAACATGATGACTCAGCAAAAGACCAGTGGCGTGGAGGAGGCCAGCAGCGAGAAGGCCGGGAGCGGCGGTGGAGGAGCGGCCGGAGCCGGCTTGGTGAAGGTCTCCATGGACGGTGCTCCCTATCTGAGGAAAGTTGACCTCAAGATGTACAAAAGCTACCAGGATCTCTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACTATGGGTACGTGTTAGAAATTTCACATCGAAAAGTGTGGAAAAACTAAATTAGTATATAACAAGATATATTATTTACACATTTATTCATACAAATTTAATGAATCTTTTTTTGTTTTTTTTGGTAAAATGTTAAAAAAAATTATGAATCTTACCAAGATAGAACTATACATTCGCATCATATACATATTAACAAGTAAATGTGTACGCTTTAACTATGTAGTATATATAAATATAATGATATAAGCACATAAATTTATATGATTTTTGAATGTCTTGAATAAATTTCAAGGAAACTATGGAGCACAAGGAATGATAGATTTCATGAACGAGAGCAAGCTCATGAATCTCCTGAATAGTTCTGAGTATGTCCCAAGCTACGAGGACAAAGATGGTGATTGGATGCTCGTCGGCGATGTCCCATGGGAGTGAGTCAAATTTAATCACTATACCGTTTCATTTTTTATTTTTTTACTTATAACCTGACTCATTAACCACATTTCCGAAATTGGTAGAGACAAAGCCAAAGATATTCAACACCCATGTGTTATAAATACGTACAACCATGCATTGGTTGGCAAGAGACAAGAGGATCTTTCAAAATTATACAATAGTATCAACAAGTTTAGAGCTCATTTGTAGCTGGCACATCAATTTCTTCTCACCACATTATTGCCTAAAAAACCTTAGAATAAACTTTAAATGTTAACGACTCATATACTAATGTTCTAACCGTAAACTTGAATACCTATTTCAGAATGTTTGTCGAGTCCTGCAAACGTTTGCGCATTATGAAGGGATCTGAAGCAATTGGACTTGGTACATCTCTAACTTTTTCTTTTGATTTTCTCTTAACTTTGACCAGTTCTTTTTCTTTTAATAAAATTCAATTCTGTTTTCTTGGTTATAGCTCCGAGAGCAATGGAGAAGTACTGCAAGAACAGATATTGA
CDS Sequence
- >fgenesh1_pm.C_scaffold_3002040
ATGATCGGACAACTTATGAACCTCAAGGCGACGGAGCTCTGTCTTGGTCTCCCCGGCGGCGCTGAAGCCGTTGAGAGTCCGGCCAAATCGGCGGTGGGAAGCAAGAGAGGCTTCTCCGAGACCGTTGATCTTATGCTCAATCTTCAATCTAACAAAGAAGGCTCCGTCGATCTCAACAACGTCGCTGCAGCTCCTAAGGAGAAGACTACCCTCAAAGATCCTTCTAAGCCTCCTACTAAAGCACAAGTGGTGGGATGGCCACCTGTGAGGAACTACAGGAAGAACATGATGACTCAGCAAAAGACCAGTGGCGTGGAGGAGGCCAGCAGCGAGAAGGCCGGGAGCGGCGGTGGAGGAGCGGCCGGAGCCGGCTTGGTGAAGGTCTCCATGGACGGTGCTCCCTATCTGAGGAAAGTTGACCTCAAGATGTACAAAAGCTACCAGGATCTCTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACTATGGGAAACTATGGAGCACAAGGAATGATAGATTTCATGAACGAGAGCAAGCTCATGAATCTCCTGAATAGTTCTGAGTATGTCCCAAGCTACGAGGACAAAGATGGTGATTGGATGCTCGTCGGCGATGTCCCATGGGAAATGTTTGTCGAGTCCTGCAAACGTTTGCGCATTATGAAGGGATCTGAAGCAATTGGACTTGCTCCGAGAGCAATGGAGAAGTACTGCAAGAACAGATATTGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_3002040
MIGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLNNVAAAPKEKTTLKDPSKPPTKAQVVGWPPVRNYRKNMMTQQKTSGVEEASSEKAGSGGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKYCKNRY