Information report for fgenesh1_pm.C_scaffold_3001010
Gene Details
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Functional Annotation
- KHZ1 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ2. khz1 mutants are late flowering and double mutants with khz2 are even more late flowering. Overexpression leads to increased rates of leaf senescence.
Homologous
- Arabidopsis thaliana: AT3G12130.1, AT3G12130
- Brassica oleracea: XP_013628862.1, Bo3g064770
- Brassica rapa: XP_009146641.1, Bra034776
Gene Resources
- Pfam: PF00013 PF00642
- UniProt: D7KZP6
- EMBL: GL348715
- AlphaFoldDB: D7KZP6
- KEGG: aly:9320950
- InterPro: IPR000571 , IPR004087 , IPR004088 , IPR036612 , IPR036855 , IPR045877
- PANTHER: PTHR12547
- SUPFAM: SSF54791 , SSF90229
- PROSITE: PS50084 , PS50103
- Gene3D: 3.30.1370.10 , 4.10.1000.10
- OrthoDB: D7KZP6
- CDD: cd22464
- eggNOG: KOG1677
- STRING: 81972.D7KZP6
- HOGENOM: CLU_045191_2_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_3001010
TAGGCGATTGACCTGCGTAGCTCTGCTTCCCCATGAGCAAAGTGACATCTATCACCAAATGTACAGTTTCCTTTAGAGTATCTCTCACATATCTTAGTCTTAAAGTTGCTCCCTGGATGCGGTTTCCCTTCAGAACCCATGCCACCACCACCAAGACCGCCAGGTGGTTTCTTAGCTGCTGAATTAAGCCTCCCAATCAATTCTCTTACCATTGCACTCGCTTCGTTTATCTGCTCAAATGTTCCTTCAAGCTCAATGTTCTTCAAGTTTGGGTCTCTCTCGTGATCTTGAATTGATAACTTTGCCCCCGTCTGACGACATATCTGCTTTGAACTGACTCCACCTTTTCCAATGATTGCACCGGCTAAAGAGGCATCAACACTAATTTTGGCAGTGGCTGAGGCACCAAAGCTAGAGACATGGCCAGGCCCAGACTCCCCCCTCCCTGAGAATCGGCCTCCATTACCAGAACCTTGCATGTTTCTGGAAACTTGAGGCATGGGTGGTCCCATATTTGTCATCTGCGCTACAGCATTGTATCCTCCGGGAACATAATGCAGGAAATGACAATTCTCTCCAAAAGGACAGCCAGAAGTGCTGCAATAGAAGCATAATACATCAGAGATTTAAACCCAATGGGAATACAATAGCACAAGAACAGACCATTAAGACACAGAAGAAATGGCATATTGATCCAAGTATAACTGCAATGTTCATTGCTATGAGAGAATAAACATATTATTCCTGTTCCGATTACTATGCAGGACAAGTTCACTAGCAATGCAAGAACTTTACCTGACCATAAATGACTATATTATAAACCCAAAATCACTAATACCCTACAACCAAATAGAAGAGCATAACACCTTTCTCAACAACTCTTATAGCTCAAAAAAAATACATGATTTGTTTTTTTGTATGTTATAATCACCAGTTGAACTAAATGTTTCTCAAATTATGATCCAGATACGATTATATGTTCGTAGTAGGCGTCACATTTACAGATTGAAACTTGTTTACATACCTGTATAACAACTAACCACTTCATTAGCATACAGTATTATTTGTTAATTTCGGGATCAGACTTGCAGGTAGATAACAATTAGCATATTAATTCATTAAGTAAAAGGATTATAACCTGAAAAATTTTGTGCATGGCTTCGATTTGCTTCCTAAACCAGTTGAATATGATTCCATCTCTGTTCCAAACATTAAGTGTTTTACTTTAGTTAAAAACTTATCTGAAGTTCAATATATTGCTTTTAGAATCCAATATATCATTCATACATTCATCTATATGAAACTTTCAAATCAAAAGATGCATAATTTTTTGAATGTTTTCAGGATCACTAACCAACTGGACACAAAAACACTTGACAGAGGAAAAAGGCTTATTCAATCAAGAAAACCGAATCTTTTGGAATGGTTATGAACTGTTATTAGCTTATACTTGAAAAGAGGGATTAACGGAAAGCAATACTAAAAACTCAAGAGACAGTGAAAGATTTAAGCCTGAGACCAACAATCCCTGCAATTAACTATAGTAACAACTTAGCAAAAGCCGATCCATCATCACTCAATTTAGATTTAATCAGATAAAAAGGCCAGTACTTTTTGCAGTTATCTAGCTAATTAACCAGATAAGTAAGCAAGCAGGACACGAAATCACCAAAAGAAAGCACTGAGAACGAAAGAAGAAAATTTTGCCTCCTAGTAAATCTCATAACTAGCAACAAAAAAAATCCTAATTTTACCCAGAACTGAAGATCTCAAATTTAAACCTTTATCAGAGCCAGTGAAGCATAAGAACTAAACAGATCGTAGTAACATAATTCTAGTAGATAAAGAGTAAAGGAAGCAAGAAACAGTGAAAGAACTAACCTTGCTTAGACTTCTTGTATCCGCCGCCATTGGAGTTGAATGAGCCAACTTCAGGCCGTCCTCTCTTACGAGTATCCAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_3001010
ATGGATACTCGTAAGAGAGGACGGCCTGAAGTTGGCTCATTCAACTCCAATGGCGGCGGATACAAGAAGTCTAAGCAAGAGATGGAATCATATTCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAATTTTTCAGCACTTCTGGCTGTCCTTTTGGAGAGAATTGTCATTTCCTGCATTATGTTCCCGGAGGATACAATGCTGTAGCGCAGATGACAAATATGGGACCACCCATGCCTCAAGTTTCCAGAAACATGCAAGGTTCTGGTAATGGAGGCCGATTCTCAGGGAGGGGGGAGTCTGGGCCTGGCCATGTCTCTAGCTTTGGTGCCTCAGCCACTGCCAAAATTAGTGTTGATGCCTCTTTAGCCGGTGCAATCATTGGAAAAGGTGGAGTCAGTTCAAAGCAGATATGTCGTCAGACGGGGGCAAAGTTATCAATTCAAGATCACGAGAGAGACCCAAACTTGAAGAACATTGAGCTTGAAGGAACATTTGAGCAGATAAACGAAGCGAGTGCAATGGTAAGAGAATTGATTGGGAGGCTTAATTCAGCAGCTAAGAAACCACCTGGCGGTCTTGGTGGTGGTGGCATGGGTTCTGAAGGGAAACCGCATCCAGGGAGCAACTTTAAGACTAAGATATGTGAGAGATACTCTAAAGGAAACTGTACATTTGGTGATAGATGTCACTTTGCTCATGGGGAAGCAGAGCTACGCAGGTCAATCGCCTAG
Protein Sequence
- >fgenesh1_pm.C_scaffold_3001010
MDTRKRGRPEVGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVAQMTNMGPPMPQVSRNMQGSGNGGRFSGRGESGPGHVSSFGASATAKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASAMVRELIGRLNSAAKKPPGGLGGGGMGSEGKPHPGSNFKTKICERYSKGNCTFGDRCHFAHGEAELRRSIA