Information report for fgenesh1_pm.C_scaffold_1003532
Gene Details
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Functional Annotation
- Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Actinidia chinensis: CEY00_Acc30448
- Brassica napus: BnaA08G0007100ZS, BnaC03G0809200ZS
- Brassica oleracea: Bo3g184890
- Brassica rapa: Bra030874
- Gossypium hirsutum: Gohir.D08G089100, Gohir.A08G079500
- Juglans regia: Jr14_21470
- Lactuca sativa: gene-LSAT_6X52501
- Manihot esculenta: MANES_15G105500
- Populus trichocarpa: POPTR_001G008800v3
- Prunus persica: PRUPE_1G537100
- Rosa chinensis: RchiOBHm_Chr5g0081511
- Vitis vinifera: VIT_06s0004g00950
Gene Resources
- Pfam: PF00097 PF02886 PF12678 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF15227 PF17121 PF18912
- UniProt: D7KM78
- RefSeq: XP_002891825.1
- EMBL: GL348713
- AlphaFoldDB: D7KM78
- InterPro: IPR001841 , IPR013083 , IPR013956 , IPR017907
- PANTHER: PTHR23163 , PTHR23163:SF8
- SUPFAM: SSF57850
- PROSITE: PS00518 , PS50089
- Gene3D: 1.20.5.340 , 3.30.40.10
- CDD: cd16499
- eggNOG: KOG0978
- STRING: 81972.D7KM78
- HOGENOM: CLU_002640_1_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_1003532
TGGAGAATCAGGAATCGGACGAGCCGATGCAGAAGAAGCCTCATCTTTTAGACTCCGTTTCTCCGACTTCCATGGCCCGTAATTCTTCACCTTCTCACCCTATTGCTAAAAGTGTAAGCTTTTTCGACTGAGACTTCTCTCTTATCTGTTTAAAAGCCCGTTGATTGAATAGTTTGATAGTATCTTTCTTTTATGAAATTGACGTTTGGAATCTATGAATGATGCAAATAAGGACTATGCAAGAGTGAGTTTTTTTTTTTTCTTTCAGGTTGATGCCACTGTTCTACAGTTACAGAATCAGAAACTGGTTCAGCAGTTAGACCTTCAGAAGAAACACCTGTACGATGTTGAAACCAAGATCCAAGAATTGCAAATCAAACAAACGTCTTATGATGATGAACTTATCTCAGTTAACCAGCTTTGGAATCAGGTCTGCAATTACTTGGTTTTTAGGTTTTCATGTTCCTTTTCGGCTTTATAGAACGACTAATTGCATCCTTTGATGTTTAACTCAGAGGGTCTGTGGTTTTATTTGTGCATTTTGACGGTTTAGTTGGTAGATGATCTGATATTGCTTGGAGTTCGTGCTGGGGCTAATCAAGAGGCTCTAAAATACTTGGACATTGCAGATAAACAGCGAGGTATTAATAAGAGTTATCTCTCAGTTCTTCAAGTATTATAGCCGCTTAGATTTGCTTAACAGTTTATCTATGTTGATGTAATTTAGGTTCAGTTCCACCATGCGCTGCTGATGAAATGTTTCTGTGTAGACTTCTGCAAGTTGATTCCTTAGATACTAGTAATAGTGATGAGGTAGTAGGAAAGGTTGAAGAAGCTCTTGCTTTGCGTCATTCCTCTACAATGGAATTGATGGGACTCTTTGAGAACACCATTGCTACACAGAGGGCGAAAGCTGAAAGTATTTCTCAAAATTTACATGCTGTGAAATCGGCAGAAGGTTGGTTGGTGTGCCAATTATCGATTCATTTTAATTTAACGGCTATAGACAATTCACATACCTTTTTTTTTTCAGATGCCACCATCCAGTTATCTAGCATTAATGATTTGATGAAAGAGGAGGCCAAAAACTTGCGTGAGATGATTGATACTTTACATGTGAGGCACAAAGAACACACCGAGCAGATTCATGCATACATAAGCAGCCATTCGACAGATCAATCCGAGCTTAAACACCTCAAAGGTTGTATATTTCATGATTCTAGACAATATGAGAAAATCAGCTGTTTGTTTCTATAAGCGTAGCACATTTTCCATTTTGCACACTATAACCGGGATGTAAGAATTTAAGTATTAGCATGGTGACATTTCATAATTGCTCTCTGAGTATTGAGTATCTTTGGTTATTAAAGGTCAATTGGAAGAGATCAAGGCTGAGCTTGAAGAAAATAGAAGAAAATTGATAACTCTGAAAATGCAGAAGGATGCTGCATGTGAAGGTCATGTAACATCACCAGCAATAGCAAATGGAAGCCTTTCTCCTGAGAAGCCTATAGATAAAACGAAGTTGCGTGAATTGAAGGACTCCATTGATGAAATAAAGGTAACTACATCGTTAATAGTGTGGTTCATGTTTTAATTTTTGTTTTTTCTTCCAAACGTGTAAGCTTAGCACGTGTATTGAATAATTATTCTAGATAATGGCAGAAGGTCGTCTGTCTGAGCTTCAAGCTGCACAAGAGTATAATCTTTCCTTGTCAAGACAATGTCAAGATATTGAGGTATATATATATATATATATATATATATATATATATATAGAATTTAGGGGAAAAGATTTTTCTTAGAGCAATAGTTGCAGTTGACAATGATATGTTTTGCTTAATGGATGTAGAATGAACTAACGGATGACCAGCATATATACTCGTCTAGACTGTATAGTTTGATCAATGATCGAATTCATCACTGGAATGCTGAACTGGACCGGTACAAAATTCTGACTGAGGCCATTCAGGTCAGCTTCTTATTCAATTTGCCGGTGTTTCTCTCCCACATAAGTGAGTAATTTTTTCGTCTATCATTATCTAACCTCTGCTTCAGGCTGAAAGGTCCTTTGTAATGAGACGGGAGAAGGAACTAAATCTAAGGGCAGAATCCCTAGAGGCAGCCAACCATAAGTCTACCACTGTTGGTTCTAGAATTGAAGTTCTGGAAAAGAAGCTGCAGAGTTGTATAGTTGAAAAGAATGGATTAGAGCTTGAAACGGAAGAAGCTATTCAAGATTCTGGTGATTTTCAATCCATTTCAGTACTCATTGCCTTTTTAACGCTTTATACCTGCTCTTAAAATATATCTTCCATGTTTCAGAACGGCAAGATATTAAAAGTGAGTTTATTGCAATGGCATCAACCTTATCTAAAGAGATGGAAATGATGGAAGCACAGTTGAAACGGTGGAAGGACACTGCACATGATGCTCTTTACCTGCGTGAACAAGCTCAATCGCTGAGAGTTTCGTTAAGTAACAAGGTTTGAACGCAACCACAGCTTTAAAGATTATATTCGGTATAATATTTCTCTGTTTTTCCTAAATGCCATCAAATTTGTTTTATTTTGTTGTTGTTTCGATGGACTATTTGGTCACTGCGTGAATTACTAGTAAGGAGCAGGTTACTCAATTAATAGTGTGACATAGGCTGTTATTTTGAGGATTTGATTGCCAATAAGATGAGGAGAAGTGATAAGATTTTGTTGAATTTCAGCTATTCTATGTTGACCGGTTTTGTGCTTTTCTTGTCAATGCAAAGACTTTGACTATTTTACAACTTTTATATGCACAATTAACTCAGTATTTTTTTGAAGTACAAATGTGGAATCTCCCTCCTTTGTATATACAACTTCTTTGCTTCTACTATATTTTTCCTTTGTATTGGACTAATTTAGTAGACTGCTCCCTGAAATATTGATTTTCTCATGCTAACAAAGGCAGACGAACAGAAGGGTTTAGAGGATAAATGTGCTAAACAGATGGCGGAAATTAAATCTCTCAAGGCTCTAGTAAGTTTTCAAAATGTCCCTAAAACCATCCACTACAATTTTTTTTTGTGTGGTAATTACAATGTTCTTTTGCTCTATTTACATACCTCTCTCCAACCGTTCCTAGGCACTTTATTTTCGCCATCTTTTAGGAATTCATGGATACTGAAACTCCAGAAAATTTATCAGTAAGAGTCTGAATGTCAATTGTAATATCGCAGATTGAGAAACTTCTGAAAGAAAAATTAGAGCTGCAAAATCTAGCAAGCATCTGTACGCGTGAGTGTAATGATGAAAGGTATGTGAGTATGTGACCATTTGAGTGTATTTAAGTTCTCTAAATTTTGCTGAAATCATGAGATTTGAGCTTTCCAATTTCAGAGGACTGGCAGAAATCAAGGAATCACAACGGAAAGCCCAAGCTCAGGCTGAAGAGCTGAAAAACGTTTTGGATGAACACTTTCTTGAATTGAGAGTGAAAGCGGCTCATGAGACTGAAACTGCTTGCCAAGAAAGGCTTGCAACCGCGAAGGCTGAAATTGCTGAATTGAGGACTCAGTTAGATCTTTCTGAGAGGTATGCTCTCTCATGTTACCACATCCAAGGTCATTCATTATATTCTTTTCAGTATTATATTGTTTTCTCATTTGCAGGGAGGTTTTGGAACTTAAGGAGGGTATTAAAGTTAAAGAGGAGGAGGCAGAGGCATCCATTGCTGAAATGGAGGTACAATCATCCTTCTGCTCGTTCTTCCTCATTTTGATGTTCTTAAGGAGTGTATTAAAAATCCAAAAGTTGAAAATGCTCATGTGTCTCATCCATACTTTGCTTCTCTAGACTATTGGTCAAGCCTATGAAGACATGCAGACACAGAACCAACATTTGTTGCAGCAGGTGGCTGAGCGGGACGATTATAATATCAAGGTAAGTTTTAGTGTTAATAGGACACTTTGATACTGAGATTTGGATTATTTTTTTTTCATCTTTTCTCAATTCCAATCTTTGACTTTAACTATATCTAGCCTTTGAACACATTAGTTGTAGATTTCTTATTTGATCTATGATTTCAGCTTGTTTCCGAGAGTGTCAAGACAAAGCATGCTTACAACACTCACTTATCTGAGAAGCAAGTTATGGAAAAGCAGCTACAACAGGTTAATGCATCCGTAGAGAATTTTAAAGCAAGGATTGCACATAGTGAGGAACAGGTTAGAGGAGATTTCTTGTGTAATTGTTGTAACTCTCTAAAACTGCTCTCATCAGTGTCTTTTACTAATGCTCTTATGTTCGCAGATGAGAGGCTGTTTTTCTGAGGCTTATAAATTGATTCAAGAAGATCGTCACCTCGCTATCAGCCTCGAAACCACCAAGTGGGAAGTAGCTGATGCTGACAAGGAATTCAGATGGCTCAAGTCTGCTGTTTCTTCATCCGAAAAGGAATATGAACAGATCAGTAGGAGGACAAACGACATCAAACTGGAATTGGATGATGAAAGGTGGACCTAAAAACAGATCTCTTGTTTGAACTCAATTACTATATTATGACAGATTGATATAGATTCAATCTATGGAACAGGAGGGAGAAGAAGAAGCTTGAGGAAGAGCTGATGGAGTTGAACAAGGAGCTTGGAGAGTTGGGTTCTGAGAGTGTAGAAGCTGCCATAGTGAGACTCCAGGAAGAAGTTAAGAATTGCAAAAACATCCTCAAATGTGGCGTTTGTTTTGATCGGCCTAAAGAGGTAACAATGCTCATAACAATCCTATATCTCACAGTCAAGGCAGACATAATGATTTGATAATCCTTTCTCATCACTGTCATAATCAATATCAATAGTCAATTATCATGCATCATAAAAAATCATTTTTCAGCGCATATCAACAACCGCTTTTTGTTTGAAACAATATTTTCAGGTGGTAATTGTGAAATGTTATCATCTCTTCTGCCAGCAATGCATCCAACGTAGCTTAGAGATCCGACACCGGAAATGTCCAGGCTGCGGTACCGCCTTTGGTCAGAACGACGTCCGACTTGTCAAAATGTAA
CDS Sequence
- >fgenesh1_pm.C_scaffold_1003532
ATGGAGAATCAGGAATCGGACGAGCCGATGCAGAAGAAGCCTCATCTTTTAGACTCCGTTTCTCCGACTTCCATGGCCCGTAATTCTTCACCTTCTCACCCTATTGCTAAAAGTGTTGATGCCACTGTTCTACAGTTACAGAATCAGAAACTGGTTCAGCAGTTAGACCTTCAGAAGAAACACCTGTACGATGTTGAAACCAAGATCCAAGAATTGCAAATCAAACAAACGTCTTATGATGATGAACTTATCTCAGTTAACCAGCTTTGGAATCAGTTGGTAGATGATCTGATATTGCTTGGAGTTCGTGCTGGGGCTAATCAAGAGGCTCTAAAATACTTGGACATTGCAGATAAACAGCGAGTTCCACCATGCGCTGCTGATGAAATGTTTCTGTGTAGACTTCTGCAAGTTGATTCCTTAGATACTAGTAATAGTGATGAGGTAGTAGGAAAGGTTGAAGAAGCTCTTGCTTTGCGTCATTCCTCTACAATGGAATTGATGGGACTCTTTGAGAACACCATTGCTACACAGAGGGCGAAAGCTGAAAGTATTTCTCAAAATTTACATGCTGTGAAATCGGCAGAAGATGCCACCATCCAGTTATCTAGCATTAATGATTTGATGAAAGAGGAGGCCAAAAACTTGCGTGAGATGATTGATACTTTACATGTGAGGCACAAAGAACACACCGAGCAGATTCATGCATACATAAGCAGCCATTCGACAGATCAATCCGAGCTTAAACACCTCAAAGGTCAATTGGAAGAGATCAAGGCTGAGCTTGAAGAAAATAGAAGAAAATTGATAACTCTGAAAATGCAGAAGGATGCTGCATGTGAAGGTCATGTAACATCACCAGCAATAGCAAATGGAAGCCTTTCTCCTGAGAAGCCTATAGATAAAACGAAGTTGCGTGAATTGAAGGACTCCATTGATGAAATAAAGATAATGGCAGAAGGTCGTCTGTCTGAGCTTCAAGCTGCACAAGAGTATAATCTTTCCTTGTCAAGACAATGTCAAGATATTGAGAATGAACTAACGGATGACCAGCATATATACTCGTCTAGACTGTATAGTTTGATCAATGATCGAATTCATCACTGGAATGCTGAACTGGACCGGTACAAAATTCTGACTGAGGCCATTCAGGCTGAAAGGTCCTTTGTAATGAGACGGGAGAAGGAACTAAATCTAAGGGCAGAATCCCTAGAGGCAGCCAACCATAAGTCTACCACTGTTGGTTCTAGAATTGAAGTTCTGGAAAAGAAGCTGCAGAGTTGTATAGTTGAAAAGAATGGATTAGAGCTTGAAACGGAAGAAGCTATTCAAGATTCTGAACGGCAAGATATTAAAAGTGAGTTTATTGCAATGGCATCAACCTTATCTAAAGAGATGGAAATGATGGAAGCACAGTTGAAACGGTGGAAGGACACTGCACATGATGCTCTTTACCTGCGTGAACAAGCTCAATCGCTGAGAGTTTCGTTAAGTAACAAGGCAGACGAACAGAAGGGTTTAGAGGATAAATGTGCTAAACAGATGGCGGAAATTAAATCTCTCAAGGCTCTAATTGAGAAACTTCTGAAAGAAAAATTAGAGCTGCAAAATCTAGCAAGCATCTGTACGCGTGAGTGTAATGATGAAAGAGGACTGGCAGAAATCAAGGAATCACAACGGAAAGCCCAAGCTCAGGCTGAAGAGCTGAAAAACGTTTTGGATGAACACTTTCTTGAATTGAGAGTGAAAGCGGCTCATGAGACTGAAACTGCTTGCCAAGAAAGGCTTGCAACCGCGAAGGCTGAAATTGCTGAATTGAGGACTCAGTTAGATCTTTCTGAGAGGGAGGTTTTGGAACTTAAGGAGGGTATTAAAGTTAAAGAGGAGGAGGCAGAGGCATCCATTGCTGAAATGGAGACTATTGGTCAAGCCTATGAAGACATGCAGACACAGAACCAACATTTGTTGCAGCAGGTGGCTGAGCGGGACGATTATAATATCAAGCTTGTTTCCGAGAGTGTCAAGACAAAGCATGCTTACAACACTCACTTATCTGAGAAGCAAGTTATGGAAAAGCAGCTACAACAGGTTAATGCATCCGTAGAGAATTTTAAAGCAAGGATTGCACATAGTGAGGAACAGATGAGAGGCTGTTTTTCTGAGGCTTATAAATTGATTCAAGAAGATCGTCACCTCGCTATCAGCCTCGAAACCACCAAGTGGGAAGTAGCTGATGCTGACAAGGAATTCAGATGGCTCAAGTCTGCTGTTTCTTCATCCGAAAAGGAATATGAACAGATCAGTAGGAGGACAAACGACATCAAACTGGAATTGGATGATGAAAGGAGGGAGAAGAAGAAGCTTGAGGAAGAGCTGATGGAGTTGAACAAGGAGCTTGGAGAGTTGGGTTCTGAGAGTGTAGAAGCTGCCATAGTGAGACTCCAGGAAGAAGTTAAGAATTGCAAAAACATCCTCAAATGTGGCGTTTGTTTTGATCGGCCTAAAGAGGTGGTAATTGTGAAATGTTATCATCTCTTCTGCCAGCAATGCATCCAACGTAGCTTAGAGATCCGACACCGGAAATGTCCAGGCTGCGGTACCGCCTTTGGTCAGAACGACGTCCGACTTGTCAAAATGTAA
Protein Sequence
- >fgenesh1_pm.C_scaffold_1003532
MENQESDEPMQKKPHLLDSVSPTSMARNSSPSHPIAKSVDATVLQLQNQKLVQQLDLQKKHLYDVETKIQELQIKQTSYDDELISVNQLWNQLVDDLILLGVRAGANQEALKYLDIADKQRVPPCAADEMFLCRLLQVDSLDTSNSDEVVGKVEEALALRHSSTMELMGLFENTIATQRAKAESISQNLHAVKSAEDATIQLSSINDLMKEEAKNLREMIDTLHVRHKEHTEQIHAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQKDAACEGHVTSPAIANGSLSPEKPIDKTKLRELKDSIDEIKIMAEGRLSELQAAQEYNLSLSRQCQDIENELTDDQHIYSSRLYSLINDRIHHWNAELDRYKILTEAIQAERSFVMRREKELNLRAESLEAANHKSTTVGSRIEVLEKKLQSCIVEKNGLELETEEAIQDSERQDIKSEFIAMASTLSKEMEMMEAQLKRWKDTAHDALYLREQAQSLRVSLSNKADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLELQNLASICTRECNDERGLAEIKESQRKAQAQAEELKNVLDEHFLELRVKAAHETETACQERLATAKAEIAELRTQLDLSEREVLELKEGIKVKEEEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKHAYNTHLSEKQVMEKQLQQVNASVENFKARIAHSEEQMRGCFSEAYKLIQEDRHLAISLETTKWEVADADKEFRWLKSAVSSSEKEYEQISRRTNDIKLELDDERREKKKLEEELMELNKELGELGSESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLEIRHRKCPGCGTAFGQNDVRLVKM