Information report for fgenesh1_pm.C_scaffold_1003423
Gene Details
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Functional Annotation
- Encodes a RING‐finger ubiquitin ligase
Homologous
- Actinidia chinensis: CEY00_Acc23758
- Arabidopsis thaliana: AT3G15070
- Brachypodium distachyon: BRADI_5g24120v3
- Brassica napus: BnaA05G0163100ZS, BnaC05G0452100ZS, BnaA03G0340000ZS
- Brassica oleracea: Bo5g127480
- Brassica rapa: Bra038109, Bra001582
- Gossypium hirsutum: Gohir.D05G207533
Gene Resources
- Pfam: PF00097
- UniProt: D7KKF1
- RefSeq: XP_002891736.1
- EMBL: GL348713
- AlphaFoldDB: D7KKF1
- KEGG: aly:9327798
- InterPro: IPR001841 , IPR013083 , IPR045191
- PANTHER: PTHR22937 , PTHR22937:SF222
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- OrthoDB: D7KKF1
- eggNOG: KOG0800
- STRING: 81972.D7KKF1
- HOGENOM: CLU_020342_0_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_1003423
TGTTTTTATGGATCGAATTATATCAGAGGGGTCCTGCAGCAAGCGAAATGGGACAAAGAAATAGGACTGTTGATTTAGAAATGGAGCAGCAGCAATCTCAAGCTTCTCTCCAACCAGAACCTTGCATCCTTTTAGGCAGCTTTCCGCAACAACCGGATAATAATAATATCCCTGCCATGGTTGCACACGTTCCTAATTTAGAAGCTCATTCTCTTCAAGACCCAACATATGACAACTCGGCAATGTTCTACGGGCTTCCTCAGTACCATCATCATCCTCATCAGCGTGCTCCAACGAATTTCTATGTTCCCTATGTGGCATTTCAGGCTCCTCCGGGTCAGTTACCATCTTCAAGCAGTCACGGTGTAGTTGGAGTAAGTCCTGATCATGAATACGAAAGAAATGCTCATTTTATGGATCACACAAGAGGGACATATAAACGAAAAAACGCTGAAGGAATACCCGGACAACCTCAATATTTAAGTACCTTAGCAGCTCCATTCAACACACCGGAGACAATAGCACCTTTTGTAGGCACTAGGAACAGACCAGGAGCTGTTACAGTGAACCCTGTTCTTCCTCCTCATGCTCCAAACAACTTCATTCAAGGAAACTATGCAGGTCATCATCCTTTTCCACCTCCTGGATCAATCTGGTATGATCAACACCACGGCAGATCTGATGGCTCACCTTCGTTCTGGCCCACACCTTACATGCACGGTACCTACTAACACACAATCTCTTTTTAAAGTTTTTAACTTTGTAATCTTATTTATCTATCTTTGAATGATCTTTCAGGTAGTAACATTGTCGCTGGTTCCATAGAGTCTAGTAGCAGAAACCCTACATCATTTATGTATCCTTCTCAGTTAAACCCGAGGGACCACTATTATAGTCATCATCACCACCCGGCACCTCCTCCTGTACAAGGCATGAGAGGCCAGAATGCCACATTATATCCTCACACAGCTTCTTCGGCTTCATACAGAGTTCCTCCAGGGAGTTTTGCTCCGCAGAACACAATGAATAATGGTCCCTCGGGCTCAGAGATGGGTTCGAGTCACATGGGTCTGGTTCAACCAACCGGGTTTCGGATATACCAGCATCATCAGCGAGATGATTCTGTACCTGTAGCAACTCTTAGACAACACCGTGGAGGAGTTCCTCGGCTTAGAGTGATGCCTGATGATGTAACTTTCCTGCCTCAAATTTTCTGTCCCATCTTTTTCCATTTCCGTCGTTGCTCAAGGTTCTGTTTCTTTTGGTTCTCTCAATGTGTGTAGGAAGTTGCACTTTTGGAGTTTGGAGACTTCCTTGGTGGTTCTGGAAATAATCACATTGATCATCATCGAGATATGCGATTGGACATCGAGGAAATGTCTTACGAGGTGAGCCCATCATTACTCTTTACTAATGTAGTTATCAGAGTTAGGAGCTAAAAGTTGCCGTCTTTTATTATCTTTTCCCTGAGATGATCTTGGGTTTAGCATGAGCTTGAGAATTCACAATGAAATTTTCTGTGATCACAGTTAGGATTTTGTTGATCTGATTTGTAAATCTGGGGTTTGAACAGGAGCTTCTTGCTTTGAGTGAGCGAATTGGGACCGTAAACACTGGTTTGCCAGAGGAAGATGTTAAGAATCATTTGAAAACAAGAACATGTTCTGGAATCAACCTTGAAAAAGAGTCGTCGTCTCCACGAACTAAAGATTTAGAAACTGAACCGTGCACGATATGTCAGGTAAAAAAAAAGCCAAAGATCAAAGCTTTGTAATGTGGGCTGCACAGGCTTGGAATTAGAGCTCTAAAGAATTCTCTCAATATCTTTACAGGAAAGCTTCATGAACGAAGAAAAGATTGCAACTTTGGATTGCGGGCACGAGTATCATGCAGAGTGCTTGGAGAAATGGCTGATTGTGAAGAACGTTTGCCCAATCTGTAAATCAGAAGCACTGGTCATGGAGAAGAGAAAGGTATAG
CDS Sequence
- >fgenesh1_pm.C_scaffold_1003423
ATGTTTTTATGGATCGAATTATATCAGAGGGGTCCTGCAGCAAGCGAAATGGGACAAAGAAATAGGACTGTTGATTTAGAAATGGAGCAGCAGCAATCTCAAGCTTCTCTCCAACCAGAACCTTGCATCCTTTTAGGCAGCTTTCCGCAACAACCGGATAATAATAATATCCCTGCCATGGTTGCACACGTTCCTAATTTAGAAGCTCATTCTCTTCAAGACCCAACATATGACAACTCGGCAATGTTCTACGGGCTTCCTCAGTACCATCATCATCCTCATCAGCGTGCTCCAACGAATTTCTATGTTCCCTATGTGGCATTTCAGGCTCCTCCGGGTCAGTTACCATCTTCAAGCAGTCACGGTGTAGTTGGAGTAAGTCCTGATCATGAATACGAAAGAAATGCTCATTTTATGGATCACACAAGAGGGACATATAAACGAAAAAACGCTGAAGGAATACCCGGACAACCTCAATATTTAAGTACCTTAGCAGCTCCATTCAACACACCGGAGACAATAGCACCTTTTGTAGGCACTAGGAACAGACCAGGAGCTGTTACAGTGAACCCTGTTCTTCCTCCTCATGCTCCAAACAACTTCATTCAAGGAAACTATGCAGGTCATCATCCTTTTCCACCTCCTGGATCAATCTGGTATGATCAACACCACGGCAGATCTGATGGCTCACCTTCGTTCTGGCCCACACCTTACATGCACGGTAGTAACATTGTCGCTGGTTCCATAGAGTCTAGTAGCAGAAACCCTACATCATTTATGTATCCTTCTCAGTTAAACCCGAGGGACCACTATTATAGTCATCATCACCACCCGGCACCTCCTCCTGTACAAGGCATGAGAGGCCAGAATGCCACATTATATCCTCACACAGCTTCTTCGGCTTCATACAGAGTTCCTCCAGGGAGTTTTGCTCCGCAGAACACAATGAATAATGGTCCCTCGGGCTCAGAGATGGGTTCGAGTCACATGGGTCTGGTTCAACCAACCGGGTTTCGGATATACCAGCATCATCAGCGAGATGATTCTGTACCTGTAGCAACTCTTAGACAACACCGTGGAGGAGTTCCTCGGCTTAGAGTGATGCCTGATGATGAAGTTGCACTTTTGGAGTTTGGAGACTTCCTTGGTGGTTCTGGAAATAATCACATTGATCATCATCGAGATATGCGATTGGACATCGAGGAAATGTCTTACGAGGAGCTTCTTGCTTTGAGTGAGCGAATTGGGACCGTAAACACTGGTTTGCCAGAGGAAGATGTTAAGAATCATTTGAAAACAAGAACATGTTCTGGAATCAACCTTGAAAAAGAGTCGTCGTCTCCACGAACTAAAGATTTAGAAACTGAACCGTGCACGATATGTCAGGAAAGCTTCATGAACGAAGAAAAGATTGCAACTTTGGATTGCGGGCACGAGTATCATGCAGAGTGCTTGGAGAAATGGCTGATTGTGAAGAACGTTTGCCCAATCTGTAAATCAGAAGCACTGGTCATGGAGAAGAGAAAGGTATAG
Protein Sequence
- >fgenesh1_pm.C_scaffold_1003423
MFLWIELYQRGPAASEMGQRNRTVDLEMEQQQSQASLQPEPCILLGSFPQQPDNNNIPAMVAHVPNLEAHSLQDPTYDNSAMFYGLPQYHHHPHQRAPTNFYVPYVAFQAPPGQLPSSSSHGVVGVSPDHEYERNAHFMDHTRGTYKRKNAEGIPGQPQYLSTLAAPFNTPETIAPFVGTRNRPGAVTVNPVLPPHAPNNFIQGNYAGHHPFPPPGSIWYDQHHGRSDGSPSFWPTPYMHGSNIVAGSIESSSRNPTSFMYPSQLNPRDHYYSHHHHPAPPPVQGMRGQNATLYPHTASSASYRVPPGSFAPQNTMNNGPSGSEMGSSHMGLVQPTGFRIYQHHQRDDSVPVATLRQHRGGVPRLRVMPDDEVALLEFGDFLGGSGNNHIDHHRDMRLDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINLEKESSSPRTKDLETEPCTICQESFMNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEALVMEKRKV