Information report for fgenesh1_pm.C_scaffold_1003335
Gene Details
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Functional Annotation
- Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.
Homologous
- Arabidopsis thaliana: AT1G52150.2, AT1G52150.1
- Brassica napus: BnaA06G0020300ZS, GSBRNA2T00029833001, GSBRNA2T00088278001, BnaC06G0062700ZS
- Brassica oleracea: XP_013592012.1, Bo6g027650
- Brassica rapa: XP_009147709.1, Bra018948, XP_009107147.1
- Raphanus raphanistrum: RrC974_p5
Gene Resources
- Pfam: PF00046 PF08670 PF01852
- UniProt: D7KIP0
- RefSeq: XP_002894358.1
- EMBL: GL348713
- AlphaFoldDB: D7KIP0
- InterPro: IPR001356 , IPR002913 , IPR009057 , IPR013978 , IPR023393 , IPR044830
- PANTHER: PTHR45950 , PTHR45950:SF1
- SUPFAM: SSF46689 , SSF55961
- PROSITE: PS50071 , PS50848
- Gene3D: 1.10.10.60 , 3.30.530.20
- CDD: cd00086 , cd08875 , cd14686
- eggNOG: ENOG502QPKR
- STRING: 81972.D7KIP0
- HOGENOM: CLU_012517_0_0_1
Sequences
gDNA Sequence
- >fgenesh1_pm.C_scaffold_1003335
CACACAAAGGACCAATTGATGAACACAAAGCAGATGCAATGAGCATTTTCTTCTTCATTCAGTACTTTCCAAGCAACTGCTCTCTCATACGAAACTGGTCTCCCCATGCTTGAGAGACATATCCCGCCTTGAAGGCATGCGAAACCCTGAAAATATAGATCCCGGTAAGTCGATAAAACTGAACAAATGCGATAAGAATGAAGATCAGAAAATGTTTCTAAGAACCTGTTGCATGATCTGTGGGAACTCAGAGCAAAGAGTTTTTCTTCCATTGTCATCAAATATCTTCTCTAAAGAGATGTCTTGAAGAGCAACTAATGTAGTCTCCAGCATGTCGAGTCCCGCCTGGTTCGCAAATGTGAAGACGGGCAAAGCCTAACCAAAATTCAAATCCCAAAACAGATCAGCAAATACACAAGTCAAGTACTCCATTCGAGTAATACACATTTATGTGTTTAACATTGTGTTTATTACCTTCATTGAGCAGCAGATTATAGCATCAGTGTGATGCCAAAGATTCTTAAGAATAGATTCATTGCCTTCGCTGTTTGATTTAAGTAGCTCAACACCCATGTAGCCCCTATTATCAACGGGTAATATGAGTATCTTTAGTAACTACACATTGTTGATTTGGTGGGAGAATTAGAACATATTTGATTGGTCGGTTTATACCTGTAACTCTGGCAGATCCAACGAGCAAGTGTTTGGGCTTCAGGAGTACCCAAAGGAGTGCGTAGACCAACTTGTGAACTGATATGAGAAGGAGAAAGAGCCAATGCTACTCTCTGCACCGATGATATGATACCTCGAACATACTGCCTAGCCATGGATGCTACATGTTCTTGCATATGGCTCTCGATACCAAACTCAAATGCTATTGTCATCACAGATCTTGCACATGTGGAGTTTCCTGATTGATCAGCTGAGGCTTTTGTTCCTGCTGAACCAATTTCCAGTGCCGAAGCAAGATCCAAGGTTCGGTTTGGACTAGATACTTCCTGCTTTCGGGTACAAGAAAAGCTTAATAATCTGACAAACTGAAAAATAGAAGACTTAGATGTAAAACATAATATATTCTAACCTTCGCGGAATCAAGAGGGATAATACGAAAACCAGAAGGAAGCAGAGGTGCATCATCCGCAAAAGAAGCGTCAATTGGAGCAAATATAAGTTCAGCACATGTTCCTACGGCATTTTCATCCATTCCGCTACAAAGCTAATCACAAGAAACATATATTTCAGGTACTAGAGACCTACATTAAAACCTTATGCAGAATAGACAACCTAAAGTACTTACTTGAAGAAGGAAGATGTCTCTTGGAACGATTGCATCTTCAGGGGAATGACCAAGACCTTCCAATTTGATGACTTCCATGAACTGAGAATGAATCCAACACCAACCATTACTTCAACTTATATTATGGAGATAAAAGAAAACAATTAAGGGCGTTGAAGAAACTTGAACTAACCTCTTCATGCTCAATAGTATGAGCAAGTGGAAGTATAACTTGCCCTCCAAATCCTCCAACTCGGGCACTACAAGGCCCCACTTTTACTGCTGCTGCTAAATACGCATCAATGTTGTTGTCAGCCCATTCTGATCTATGCTCCCTCAGAAATCGAAGCAGGATCGCCGGAGGAACATTCTGTAGTTGCAAAATCGTAAAAATGAAGGTGGAAAAGTGTTGAAACAATCATCAGTTGATCTATAAAAAAAAAGTGGTGTACTGACCTGTAAAAGCATTGATGCTTTTGCGCATAAAACAACATTGCTTACAGGAGCAAAGCCATTGGAAAATGTAAGATTTATACCCATTAGCTTGTCTGGAGAAGAGTTCACAGTGATTGTGACATCATCCATGCTATCTCCTATCACTGACCATCCTTCATCAGTGAAACCATTCACAGCTTCATTGAAGCCTCTGTAGGGAAATAAATGTATAAGATAGCAATATATAGAACCCAAACCCACCAAGAAGAAGAGCAAACCGTTATGTATATAAATACCTGCTTAGCCTCTGACTGAGAGCTCTTAAGGCAGCAGGACGCCGCCCCCACCCATTAACACTACTATTAGTCTGAGTAACCTCTTGAGCTATTTGCTTGAGTTGACGCAGTGCCTTTTAGACAAATTGGACAAATATACATCATGCAAGAAGAATAATTTCATATATCAGAATGCAAGCTTAGGAGAATAGATGAGTTTAATTAACATACTGCCATTGTTGTCTTCTGCGCAAGTACTTTTGGTGACTCATAGAGCGGGCGCAAGACCTCAGGCACGCTACAAGCCTATTTAACAGAAAACATATCCAAACAGTTTGGTTAACATTTCCAAGACACTGATTGATGCATTAGAATTAGTGCAGAGCGAGGCTTGTTACCTCCAAATCCATATGATCCACTATGTGTATGATTGAGCCACCACCATCACAAGGCCGTATCAAGTACCCACTGGGAAGCATCTCTGCTCTCACAAAATTCTGAACCAGTGGCATACTAGGACCATTTTGGGTGCTCTTCAGAGATCTCTCACAAACCTACAAGATTTGTTACACCTTGTGAAAAGGATCAACATGAATAAGAACACTGACAGAAAAGAAAAGTTACATACCACAAGGCTGCCATCTTCTAAAACAGAGGTGTAACGCAACAGCCAGAAATCGCGTGGTGGGGCCAACGTAGTTGGTGCATAGAGCTGCAAAAACCAAGAGGATGGTGGTCATTATTTTCAACATTAGAAAAATAATACTAATTGTAGCACATATAATTTAAAACTAACCTGCATATAAAGCAGCTCAATGGTTCCACCATTGGCTGTTGGCAACACGTTCATAACATCAACAGCTCGACATTCGCGGAACCACGAAGGACGATCCTTGACGATCTCTGCAACCTTGAAAATAGAGAAAACATTTTAATTTTGTTACATAAAATACATGTGGAGATTATATAAATCAGCGATGAGAATGATTCTATATACTTACCCTTGTAGGCTCAAGACCCACTAGGCCACAGGCGCGTGCTGCCACACCAGTGCAACCATGAGAAATAGCGATGATTCCAATGGAATCCGGACCAGGCTGTTACAGAAATACATAACAACCATCAACGAAAAAGCAGAGTAACTACTTGATATCTTACACTATAACCAATTAACAAAAACAAAATTAGAGGAATTGAGTCAAGGGCATACCTTCATTCCAGGCATCTGTACCCACTCGACAGCGGTTCCAGTTGCCTTTGAAAGAAACTCTGCTAAAGTTTCTTCTGCAATGGACAAAAGCCTGAAAACATCAAATGTATCATTGAATCTCAGAAAAATATGACAAAGTGTATTTTTTAAACAAACAGAGTAACCATATTCCAATCAAAGAACCAACCCTGCAGGACTAGCATCTCTTTGAGGATTTTGAGATGCCAATTGGTGCTGACCACTCGTCACCACCGACTCACAGCTTGTGTCTTTAGCTGGGAGTGAAGGCTGAAAAAAAGACAAATTGATACACATACCATCAAAAGGATATCATTATTCTTAAAGAAAACATTCTAGAGATCGATCATTAAGATAAGAAAAACTGAAGATATTGCAAGAGTAGAATCCTCACATTGGGAGTATGTTGACGGAAGTAGCTGTTTTCATGGACCAGCTGTGACACTTGCTTCTGCAACCTATCATTCTCCTCCATCAAGAGCTTGTTCATTGCCGTCAACTTCCGATTCACAGCTTGAAGCCGTGAAGCCTCTTTCCTTTGCTTCTCTCTGCATCTGAAGTTTATAACAGAAAACGAAAAAAAACAAAGATTGAATCAACTAGATAGAGAGAACACCACAGAAACATCCAATTACTACAATTCCAAGCAATGAATATTATTCTTACCTTCGGTTCTGAAACCACACTTTGATCTGTTTAGGCTCAATGTTAGAGAGAATAGGACACTCTCTGATCAACTGCTGACGGCGAATAGAACTCGGTTTAGGACATTCATGATAAAGCCTCTCAAGTGCTTCAACTTGTTCAGGTGTGTACCTCACATACTTGCCATTATCTAAACATCCCAACTTACCATCCTTGCAAGACATTGCCAT
CDS Sequence
- >fgenesh1_pm.C_scaffold_1003335
ATGGCAATGTCTTGCAAGGATGGTAAGTTGGGATGTTTAGATAATGGCAAGTATGTGAGGTACACACCTGAACAAGTTGAAGCACTTGAGAGGCTTTATCATGAATGTCCTAAACCGAGTTCTATTCGCCGTCAGCAGTTGATCAGAGAGTGTCCTATTCTCTCTAACATTGAGCCTAAACAGATCAAAGTGTGGTTTCAGAACCGAAGATGCAGAGAGAAGCAAAGGAAAGAGGCTTCACGGCTTCAAGCTGTGAATCGGAAGTTGACGGCAATGAACAAGCTCTTGATGGAGGAGAATGATAGGTTGCAGAAGCAAGTGTCACAGCTGGTCCATGAAAACAGCTACTTCCGTCAACATACTCCCAATCCTTCACTCCCAGCTAAAGACACAAGCTGTGAGTCGGTGGTGACGAGTGGTCAGCACCAATTGGCATCTCAAAATCCTCAAAGAGATGCTAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCAACTGGAACCGCTGTCGAGTGGGTACAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCATCGCTATTTCTCATGGTTGCACTGGTGTGGCAGCACGCGCCTGTGGCCTAGTGGGTCTTGAGCCTACAAGGGTTGCAGAGATCGTCAAGGATCGTCCTTCGTGGTTCCGCGAATGTCGAGCTGTTGATGTTATGAACGTGTTGCCAACAGCCAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTCTATGCACCAACTACGTTGGCCCCACCACGCGATTTCTGGCTGTTGCGTTACACCTCTGTTTTAGAAGATGGCAGCCTTGTGGTTTGTGAGAGATCTCTGAAGAGCACCCAAAATGGTCCTAGTATGCCACTGGTTCAGAATTTTGTGAGAGCAGAGATGCTTCCCAGTGGGTACTTGATACGGCCTTGTGATGGTGGTGGCTCAATCATACACATAGTGGATCATATGGATTTGGAGGCTTGTAGCGTGCCTGAGGTCTTGCGCCCGCTCTATGAGTCACCAAAAGTACTTGCGCAGAAGACAACAATGGCAGCACTGCGTCAACTCAAGCAAATAGCTCAAGAGGTTACTCAGACTAATAGTAGTGTTAATGGGTGGGGGCGGCGTCCTGCTGCCTTAAGAGCTCTCAGTCAGAGGCTAAGCAGAGGCTTCAATGAAGCTGTGAATGGTTTCACTGATGAAGGATGGTCAGTGATAGGAGATAGCATGGATGATGTCACAATCACTGTGAACTCTTCTCCAGACAAGCTAATGGGTATAAATCTTACATTTTCCAATGGCTTTGCTCCTGTAAGCAATGTTGTTTTATGCGCAAAAGCATCAATGCTTTTACAGAATGTTCCTCCGGCGATCCTGCTTCGATTTCTGAGGGAGCATAGATCAGAATGGGCTGACAACAACATTGATGCGTATTTAGCAGCAGCAGTAAAAGTGGGGCCTTGTAGTGCCCGAGTTGGAGGATTTGGAGGGCAAGTTATACTTCCACTTGCTCATACTATTGAGCATGAAGAGTTCATGGAAGTCATCAAATTGGAAGGTCTTGGTCATTCCCCTGAAGATGCAATCGTTCCAAGAGACATCTTCCTTCTTCAACTTTGTAGCGGAATGGATGAAAATGCCGTAGGAACATGTGCTGAACTTATATTTGCTCCAATTGACGCTTCTTTTGCGGATGATGCACCTCTGCTTCCTTCTGGTTTTCGTATTATCCCTCTTGATTCCGCGAAGCAGGAAGTATCTAGTCCAAACCGAACCTTGGATCTTGCTTCGGCACTGGAAATTGGTTCAGCAGGAACAAAAGCCTCAGCTGATCAATCAGGAAACTCCACATGTGCAAGATCTGTGATGACAATAGCATTTGAGTTTGGTATCGAGAGCCATATGCAAGAACATGTAGCATCCATGGCTAGGCAGTATGTTCGAGGTATCATATCATCGGTGCAGAGAGTAGCATTGGCTCTTTCTCCTTCTCATATCAGTTCACAAGTTGGTCTACGCACTCCTTTGGGTACTCCTGAAGCCCAAACACTTGCTCGTTGGATCTGCCAGAGTTACAGGGGCTACATGGGTGTTGAGCTACTTAAATCAAACAGCGAAGGCAATGAATCTATTCTTAAGAATCTTTGGCATCACACTGATGCTATAATCTGCTGCTCAATGAAGGCTTTGCCCGTCTTCACATTTGCGAACCAGGCGGGACTCGACATGCTGGAGACTACATTAGTTGCTCTTCAAGACATCTCTTTAGAGAAGATATTTGATGACAATGGAAGAAAAACTCTTTGCTCTGAGTTCCCACAGATCATGCAACAGGGTTTCGCATGCCTTCAAGGCGGGATATGTCTCTCAAGCATGGGGAGACCAGTTTCGTATGAGAGAGCAGTTGCTTGGAAAGTACTGAATGAAGAAGAAAATGCTCATTGCATCTGCTTTGTGTTCATCAATTGGTCCTTTGTGTGA
Protein Sequence
- >fgenesh1_pm.C_scaffold_1003335
MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVDVMNVLPTANGGTIELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIGDSMDDVTITVNSSPDKLMGINLTFSNGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVSSPNRTLDLASALEIGSAGTKASADQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSEGNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV