Information report for fgenesh1_pg.C_scaffold_8002107
Gene Details
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Functional Annotation
- Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.
Homologous
- Actinidia chinensis: CEY00_Acc18329, CEY00_Acc29326
- Brassica napus: BnaC09G0065400ZS, BnaA09G0075000ZS, BnaA02G0392800ZS, BnaC02G0525300ZS
- Brassica oleracea: Bo9g014490, Bo2g161350
- Brassica rapa: Bra035940, Bra029332
- Populus trichocarpa: POPTR_012G065600v3
- Prunus avium: Pav_sc0000358.1_g030.1.mk
- Prunus persica: PRUPE_5G203800
Gene Resources
- Pfam: PF04004
- UniProt: D7MUH9
- RefSeq: XP_002866420.1
- EMBL: GL348720
- AlphaFoldDB: D7MUH9
- InterPro: IPR007149
- PANTHER: PTHR23146 , PTHR23146:SF0
- eggNOG: KOG2428
- STRING: 81972.D7MUH9
- HOGENOM: CLU_015103_1_0_1
Sequences
gDNA Sequence
- >fgenesh1_pg.C_scaffold_8002107
TAATCTTCGTCACTGTCATCAATCACGGCCTTACGACGATGAGTCGGAGCTTTTCTCTGCGGAGACTCCTCCTCGTCAGACTCAATCCCTTTCCTTTTCCGGCCACTTCCACGGTGATCCTTCTCTGCCCTAACTCCCTGCATAAAGCACATTTCACCACACATTAACATCATATTACAATCTCAATGAACCTCCATGTTGACAACAAAAATGAAAAACAAATGTTGTAATTTGCGTACCGCAGCCTCTTCCTCTTCTTCGTCTTCATCTGAATATCTGTTAGATTTTCCTCCTCCTTCCTCCTCATCTTCTTCTGCATCTTCCTCATATTCATCTTCTGATTCTTTTCCCCTTCCACGGGGCGGCGGTGACTTTTCTTCCTCTTCTTCTTCCGTCTCATATTCTGATTCCTCTCTCTCACTCTCAGAATACTCCATTTGACGTCTTGACGGTCTGGCCGAAGTCATTGAAGACCTCCCCGGAATGCCTTTGTGGCTCTGGTTTAACGCCAGTGAGAAGCAGTTTAATAATAGTTTAATCTCCCATGTTTTTTAGCATTCCGAGAGATATGAGTTTTTGTTTTGTTTACCTTCTTGGCGTTGAGAATCCGGCGTTCCCGTTGCGCTTCAGCTTCGAGATCCTCCTCATAGCCACGGTTTGAGCGGTGAGAACCATAGTGGTCTGTCTCGTCATCCTGGTTTCAAGAAACAATCAGTCGTTACTAGTGCAATCTTTGCTTTAGAAAAAGAAAGAACACAATATACACAAACTAATAAAACATACCTCATCAAGAGCATCTTCCAAGTAGCCGGTGGAAAGTTGTCTCCTTTCAGCAGGAAGTGTATACTTGCGCTTGATTTTCTCCCTCGCCTGACTCAGCTTTGTACTAGCTTTGAGGTTTTGGCTTTCCGCCTTCAGAATTTGAGATATTAAATGAGAAAAGTCTACAAACCCTACAATAAAACTATTGTTGGATTGTCTGAGCTCAATTAAGAGGTTACCTTTTCTCTCTTCTCCTTCTCCCTCTCAGGGTCAATGTCAGTGACACAGTTCTTAACTTTGTAGGCTTTCTTGTGCCTCGAGTCAACAAGGGCAGTCAAAAGCCTATGGGAATTTGACGTTAGAGATGATGGGATAAATCTCATTTTCTTCAAAATTCTTCCTTGTGATTGAAGGATACCCTACCACAACATCCACATAAAACAACACTTTGAGATATAGCAGAGTTGGTTTATTCTCAGAACCAAGACCACTTTGGAGTGCAGGAGAAGTTTTGGCATTTAGTAAAGAGAATAGAAGGAATGACGAAGTAACACCTTTTCATGTTTGATAAAGAGGTGATTCTGGTCTTGTTTTGCATCTTGTTCAGTTATGTCAAGAACTTCGTTTCCTATCAATAGCTGTAAGCTTCCATCTGACCACCTTACAAACCGAGCATTACTTTCACTCTGCATACAAACATAGAGTGACTTTCAGTATACTACAGCAAAAGTAAAGGAAAAAGTACAAGAAAATAAGTGCAATAAGCAACAAAACCAAAAAATCTTGTTTATGGGCAGATTTCCAATGAAGCCTAAAGAATTAGAAGAACGGTTGAACAGAGACATCATTAAATCTCATTCCAACACACATGTCCGTAATGAAAAGCACAAAGTAAACTAATTCGGAATACATAAATTGCATCAAAAGTATGTACCTATATTAACATCTTTAAGTTTAACCATAGAACATTTTATATTTCTCAGCAAAATATTTGAAACATTACCAAGAAACGCCAGTTTACGAAATTGGTTGATCAGAAGTACTAGCAATAGACAAACTATATAGCTTCATCGCAGCTTTGATGGGAAATTTAAAAGGAGAAAAGCTTTGAAGAAGTGTTCACTTACATATGTTTTGCCATCTCGACTCTTAACAAACCTATGGCGAACAATATTATTCTCCAAACGAATACGCTTCTTTGCTCCAGGTTCGTCTGTCACGAATCTGTCTTCTTCAACGAATGTTTTGGCATCAAATGGCTTTGGATCAATTCCCATGATATTGGAAACTTTTATCATGTTCATCTGAAAAAAAAAGATCAAAGAGAAAATGGTAATGGGAGGAAGAGCATTTTTGCTACAGAACATCTTAACCACAGATAGACAACTAGAAAATGGGGTTTCAGATATAAGACTGAATAGCCCTCTTCTGTACAACAAATGACGGTTCATGCTAAGTAGATGCAATGGTTCTCCACATAAAAGACATCAGATACTCACTCTTCGAACCACAATGATATGAGACATTTTGATAACTTGGAAATACCAGAAAGGAAACTATTGATTCGAAGCCATGTCAGCGAGTAATCTTTTAGCAACATAAAGCAGGTATACCTTAACGGGGTCACCTGGAGGAGGGCGGAAAGGAACCTCCACTTCCAAAGGGGGACCAACTGGCTTCTCCCTGTACCTAGCTTCAACATGCTCAGCTTCTGACTCGTATTGAGGATCCTCTTCAGGGACCATATCATCAAGTACCATATCATCAGGTCTCAGATCCTTCTCAGAGCCCTCTTCATCTTCGATTGGCGATCTCTAAAAAATTAGACATCTCATCATACATACATGCACATTTCTATGGTTTCTAAGAGGAAGCAAGCACTGGAACGGGAACAGATATTCTGTAAACTGAAATGTAATATTAGATGCAAGACTCACATGCTCAACGTCATTCCGAACATATTCTTCTGCATCTTCATCATCCGAAGATCCAAAAACATTACGAATATTTACGTCTGACTGTGCAACTTGAGTCTCTTCCTTCTCCTCACTAGGTGACGTACCCACCATGGCGTTTTTCCATGTAGAGGAGACAAAGTGATCCATAAGAAAAATTGAACACCCAAGGAACCTCAGATACCCTCAGATGACAAGCAAGTATTATCAAATCCAGAGCAGAGCAGAAAATTCAAAAAAAAAGCTACAAAACAGCTAGGAATAATAGAAGGGGGAAAAGGGGTACCTTGGACTCCTAGTCTGATCAACCTCTTCATCTTCAGACTCGTACTGCTTTTCACCGGACCTCTCTGATCCACTCTCAACAACGTCCTGCCTCCTGTTTTTGGCTACTCTACCCCCATGTTCTTCTTCTTTGTTATCACTATCACTATCTCTTGCTTCACTTTCCTCTTGTGGATCATCAACATCAACCTCCTGTGAACTTTGCTCTCTCTCACCCTCACTTTCTCCAGGATCAAGTTCTACATCTCCCTGTTCCCCGTCAGACTCAACTTCAGGCTCTCCGTGAACTTCAACCTCAGCTTCACCTTCTCCTTCAGGCTCCACCCCGCCCTCGGCCTCATCCTATTGGTGTTTGCATTGGAAATCTCAAGTAAATTTCACTGATATTGGATAATTCCGTTTATAGAAGAAGCAAAAAATCAAACAACATCATGGATTACACAATGCCAAAGAATCAGACAATAAATCATCAATGGATTATAGTCTAGTTGATATTAGGAAGAACTAAAGCTGAATTAGGCCTAATAAGTTGCATTGGTTCTTGCAATTCAGCCTAAAACCCTAAATTGAGGCGAGAAGAACTCCAGAAACCATTCGCATTCCAAGGTGTAATTCAAAAACAGTGGCAGTGAAAAATACGAAAACTGAAACAATCAATAGCGATGAAACGAAGGAGATAAAGAGGGAGAGAGTTACAGAAGCGTAGTTTGGCTGACGATTGGATTCATGTTCGGATTCGATCTCTTCTTCCTCGGAATTATCTCCGAACAGATTATGCATAATATCGGATCTCTTTTCTACTCCAACCATCTCGGATCTCTTTTCTACTCCAACCAT
CDS Sequence
- >fgenesh1_pg.C_scaffold_8002107
ATGGTTGGAGTAGAAAAGAGATCCGAGATGGTTGGAGTAGAAAAGAGATCCGATATTATGCATAATCTGTTCGGAGATAATTCCGAGGAAGAAGAGATCGAATCCGAACATGAATCCAATCGTCAGCCAAACTACGCTTCTGTAACTCTCTCCCTCTTTATCTCCTTCGTTTCATCGCTATTGATTGTTTCAGTTTTCGTATTTTTCACTGCCACTGTTTTTGAATTACACCTTGGAATGCGAATGGATGAGGCCGAGGGCGGGGTGGAGCCTGAAGGAGAAGGTGAAGCTGAGGTTGAAGTTCACGGAGAGCCTGAAGTTGAGTCTGACGGGGAACAGGGAGATGTAGAACTTGATCCTGGAGAAAGTGAGGGTGAGAGAGAGCAAAGTTCACAGGAGGTTGATGTTGATGATCCACAAGAGGAAAGTGAAGCAAGAGATAGTGATAGTGATAACAAAGAAGAAGAACATGGGGGTAGAGTAGCCAAAAACAGGAGGCAGGACGTTGTTGAGAGTGGATCAGAGAGGTCCGGTGAAAAGCAGTACGAGTCTGAAGATGAAGAGGTTGATCAGACTAGGAGTCCAAGGTTCCTTGGGTGTTCAATTTTTCTTATGGATCACTTTGTCTCCTCTACATGGAAAAACGCCATGGTGGGTACGTCACCTAGTGAGGAGAAGGAAGAGACTCAAGTTGCACAGTCAGACGTAAATATTCGTAATGTTTTTGGATCTTCGGATGATGAAGATGCAGAAGAATATGTTCGGAATGACGTTGAGCATTTTACAGAATATCTGTTCCCGTTCCAGTGCTTGCTTCCTCTTAGAAACCATAGAAATGTGCATAGATCGCCAATCGAAGATGAAGAGGGCTCTGAGAAGGATCTGAGACCTGATGATATGGTACTTGATGATATGGTCCCTGAAGAGGATCCTCAATACGAGTCAGAAGCTGAGCATGTTGAAGCTAGGTACAGGGAGAAGCCAGTTGGTCCCCCTTTGGAAGTGGAGGTTCCTTTCCGCCCTCCTCCAGGTGACCCCGTTAAGATGAACATGATAAAAGTTTCCAATATCATGGGAATTGATCCAAAGCCATTTGATGCCAAAACATTCGTTGAAGAAGACAGATTCGTGACAGACGAACCTGGAGCAAAGAAGCGTATTCGTTTGGAGAATAATATTGTTCGCCATAGGTTTGTTAAGAGTCGAGATGGCAAAACATATAGTGAAAGTAATGCTCGGTTTGTAAGGTGGTCAGATGGAAGCTTACAGCTATTGATAGGAAACGAAGTTCTTGACATAACTGAACAAGATGCAAAACAAGACCAGAATCACCTCTTTATCAAACATGAAAAGGGTATCCTTCAATCACAAGGAAGAATTTTGAAGAAAATGAGATTTATCCCATCATCTCTAACGTCAAATTCCCATAGGCTTTTGACTGCCCTTGTTGACTCGAGGCACAAGAAAGCCTACAAAGTTAAGAACTGTGTCACTGACATTGACCCTGAGAGGGAGAAGGAGAAGAGAGAAAAGGCGGAAAGCCAAAACCTCAAAGCTAGTACAAAGCTGAGTCAGGCGAGGGAGAAAATCAAGCGCAAGTATACACTTCCTGCTGAAAGGAGACAACTTTCCACCGGCTACTTGGAAGATGCTCTTGATGAGGATGACGAGACAGACCACTATGGTTCTCACCGCTCAAACCGTGGCTATGAGGAGGATCTCGAAGCTGAAGCGCAACGGGAACGCCGGATTCTCAACGCCAAGAAGAGCCACAAAGGCATTCCGGGGAGGTCTTCAATGACTTCGGCCAGACCGTCAAGACGTCAAATGGAGTATTCTGAGAGTGAGAGAGAGGAATCAGAATATGAGACGGAAGAAGAAGAGGAAGAAAAGTCACCGCCGCCCCGTGGAAGGGGAAAAGAATCAGAAGATGAATATGAGGAAGATGCAGAAGAAGATGAGGAGGAAGGAGGAGGAAAATCTAACAGATATTCAGATGAAGACGAAGAAGAGGAAGAGGCTGCGGGAGTTAGGGCAGAGAAGGATCACCGTGGAAGTGGCCGGAAAAGGAAAGGGATTGAGTCTGACGAGGAGGAGTCTCCGCAGAGAAAAGCTCCGACTCATCGTCGTAAGGCCGTGATTGATGACAGTGACGAAGATTAA
Protein Sequence
- >fgenesh1_pg.C_scaffold_8002107
MVGVEKRSEMVGVEKRSDIMHNLFGDNSEEEEIESEHESNRQPNYASVTLSLFISFVSSLLIVSVFVFFTATVFELHLGMRMDEAEGGVEPEGEGEAEVEVHGEPEVESDGEQGDVELDPGESEGEREQSSQEVDVDDPQEESEARDSDSDNKEEEHGGRVAKNRRQDVVESGSERSGEKQYESEDEEVDQTRSPRFLGCSIFLMDHFVSSTWKNAMVGTSPSEEKEETQVAQSDVNIRNVFGSSDDEDAEEYVRNDVEHFTEYLFPFQCLLPLRNHRNVHRSPIEDEEGSEKDLRPDDMVLDDMVPEEDPQYESEAEHVEARYREKPVGPPLEVEVPFRPPPGDPVKMNMIKVSNIMGIDPKPFDAKTFVEEDRFVTDEPGAKKRIRLENNIVRHRFVKSRDGKTYSESNARFVRWSDGSLQLLIGNEVLDITEQDAKQDQNHLFIKHEKGILQSQGRILKKMRFIPSSLTSNSHRLLTALVDSRHKKAYKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQAREKIKRKYTLPAERRQLSTGYLEDALDEDDETDHYGSHRSNRGYEEDLEAEAQRERRILNAKKSHKGIPGRSSMTSARPSRRQMEYSESEREESEYETEEEEEEKSPPPRGRGKESEDEYEEDAEEDEEEGGGKSNRYSDEDEEEEEAAGVRAEKDHRGSGRKRKGIESDEEESPQRKAPTHRRKAVIDDSDED