Information report for fgenesh1_pg.C_scaffold_7002750
Gene Details
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Functional Annotation
- Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.
Homologous
- Actinidia chinensis: CEY00_Acc13302
- Brassica napus: BnaA05G0144800ZS, BnaC06G0151300ZS
- Brassica oleracea: Bo6g056320
- Brassica rapa: Bra039486
- Citrullus lanatus: Cla97C04G072050
- Glycine max: Glyma.05G089300, Glyma.17G187400
- Gossypium hirsutum: Gohir.D11G242700, Gohir.A11G231400
- Juglans regia: Jr03_20750, Jr03_20740, Jr03_20760, Jr03_20730, Jr03_20720, Jr03_20710
- Manihot esculenta: MANES_08G154300
- Populus trichocarpa: POPTR_019G038700v3
- Prunus persica: PRUPE_7G010800
Gene Resources
- Pfam: PF01612 PF00570
- UniProt: D7MHW9
- EMBL: GL348719
- AlphaFoldDB: D7MHW9
- KEGG: aly:9304517
- InterPro: IPR002121 , IPR002562 , IPR010997 , IPR012337 , IPR036397 , IPR044876 , IPR045092 , IPR049559
- PANTHER: PTHR12124 , PTHR12124:SF47
- SUPFAM: SSF47819 , SSF53098
- PROSITE: PS50967
- Gene3D: 1.10.150.80 , 3.30.420.10
- OrthoDB: D7MHW9
- CDD: cd06147
- eggNOG: KOG2206
- STRING: 81972.D7MHW9
- HOGENOM: CLU_010129_4_1_1
Sequences
gDNA Sequence
- >fgenesh1_pg.C_scaffold_7002750
TAACTTTTAAAGGTCGCACTTCGGTTCCCAGATGCCGGAAAAGCTTGACGCCGTTTTCCTTGACCAAACTCTGACTGCTCCGGTCCAGACCCCTTCTTCTTCTGACCTGCTGCAACTTCTTTCTTTCCTTGTCTTCCCTTGTGTCCTTCACCAAATTTCACCTCTTTCCTTGCAGCTTCATAATCAAACGGCTCTATGTTTAAAAACTCGGTCTGCTTTTGGGCCTTGTTGCTCTTTTTCATGGACTTAAAGCACTTCTGAAAGTTTGTGGACAACTCAGACAGAGACATTGGTTCATCTTCAGCCTCAACTTCTTTCTCATCACCATTTTCTAATAGTATAATATCGCCTGTCTTGGAGCCAAATACTTTGGACTCTGAAACTCTACCAGAAGTACCAACAATCTCTGAGGCTTCTTCTGAATCATCTTTCAACTCTGTCACACCATCTTCCTTGGAAACAGAGGCTTGCATAGTAGTGAACATCTCTTCAGGCTTCCCATAAACCTTCGGAGTTGTTTCAGTAGTTGACTTTGAGTCAGGAACTTTCTCTGTAAACGAATGGAATGACAGGTTTACAGATGATCTTATCTGTTCGAGCTTCACATCTTCCTTCACCTGAAAACATTTTTATCAATCATTCTGCAACCAAAACCAGCTATAGAGTTTTCATATATATAAACTCACCTTCTCATCAGTTCGAGATTTCTTCTTCGAGGCTGCACTTCCCAGCAATGCTCCTAAACCACTGCTCGGTTTCTTAGAAATCCTAACAGCCGCAGAAACCTATAATAAATAACAGATACGTCTTTGAGAGTCCAGCATGGATAATAAAGAGCACCAACCAAAAGAAATAACTAGGTGTCACCTTAGCAGAACCAAACAAGCCGGTGCCTAAACCGCTCCCTTCATTAGTATTTGCTGCATCCATATTTAGGTCCCTGGTACTCTCAAGCTGCGAAGAATTTTCCTTCAAACTTGGAGAAGCTACATCTACTGCGTGCATGTCTTTCTTCTCACTAATATGTTCAATATTCTTATCCATTACCTACAATTTAAGAAGGCCACATTTATAAATTAAAATAGACATGGAGAATACAGGAAAACAGTTGAAACCAATAAGTAGCACATGCACTCTGAATTTTAGTAATTAGGTGAGGTTTCAGAACTCAAAAATTGGATTCACAATCAGCCCTTGACATTAAATAATTCCAACTCTAGGCTCTGGTTTTCTTTGCAGGTTGAGTAGCAGAGGGTTGTAAGCTTATACACCTCAACCAAAAGCTTACAATTATGATTCAATATACAGAAAGGGACAAGAAAATAAATCAATAGAGATGTCTTACAGTTCCAGGAGACACATCTTTTAAAGATAAAGCGGCAGACTCAAATGCTGCAGAATTTTGCATTGATTGCCTGATGACACTGACCACCGAATCAACATTACGCTCGATATAAGGATGCTTTGACTTCAACATCCGACGCAATTTGCCAACACTAACAGGCATCTCCTTGGCTATTAGGATAGCAACATTAGACCACGTTAGGAATTGCCAAAACAAATTCACTCTCTGCCAGATGGTAAAATTGAACTCTCAGCTATACAAACCTATTTCAAGGAGAACTTTGTTTGGCAATACATAACCAGTGCTCTCATCCTCTGCACGTGCAATGAAATCCCTCCATTCGCAAAGCCCCTAAGAGAAAGTAAATTTTAAGTTAGCTCTATATAGTATAAGAAAAAGCAGAGTAAGTATGCATCATTCATTACATCACACAAGAACATCGTACCGCAACAATGGCAAGTTGAGCTGCATTAAAGCCCGCTGCTTGAAGCCTAACAAAATGCCAGGATGTGAAATATAATACTGGTTTATGTAACTTAGCTTAAGAGAAGCCAGCTAATGAAACAACAATATGATTAACAGGTTTTATCAATAAACGCATACACCTTGTCTGCTGAAATAAAACAAAACTTAAGTATGTAGACTCTCTCAAGAAAAAGCAACAAACCCATATACGTGAAGATATGAATTCTCGGTCAATAGCTCTTTCTCATATAGTTGTGTGCACACATCGTAACTCCGCTTGTAGACCTGTACGAAACAGTAAGACAAGATAGTAAAAATATTGGAGAAGAAAGAGCATATTCTTCCTGGGCCATATATCCACGGGATGTAACAATATCTAGACAAGCAAAGAAGTTAGCGAGTCAACGGAGCTGAATCACCACTTTTAGACACATATGAATGCCAATAACCACAATGAATATCCAAAATATGTGGTAGAATATACTTTTTTAACTATGCTTACAAAAGACAATTCAGCCAGAGAACTATTTTATGGATGACGGATGCCATTGAAAGTTATTCTTAAAAAGTATACAATAAGAACACTGAAATTCCAATTAGCCTAACATAACCCACCAATTATCTAGAACTGACCAGTTCCTTCCAAAGTCGCTCTTAAAAAACATAAGAATGTTGCAAATGTGGAGAATCACTTAGGTTAGGAAGCTAATATAATAAGAATACCGAAAATCTAGCCAACCTAAGTGATTGGTCACAAATCATTTTCCAAAAACAATGTTATGCCATCAAGTTTTTTAAGCCACACAAATTCCGACTTGGCCACTGAGGGAAACTAACAGAAAGATAGTAAGAACAAAGCACACAATCAAAGACAATAATACATCTACCATGCAAATACCAACATGCAGAGGAATATTATACTTGTCAGGATAGTTTAATGATGACTACCTGAAGCAGAGGAGAGTCAGTATGCTCGTCATCCTTTGCCATTCGTTCAAGTTCTAGTCTCATTACATCATATATGTATAAAAGATAGTGGGTATCTTCTCTTGCATATCTGCAGCGAAATCCAAAAATGTTAGCTCAAGTCAACTTAGGCCAGAACAGTAGTGAAGAGACACAGGACAGAAAAGATTGACCTTGTCATTTCCTCTGGAAGGGGTCGAATTCTCCAGTCTGCATTTTGGTATCTACAGCAATAAACAAAACAGAATTGAAAGACGAGTGACGGACAAGGGTGAAAAAAATCCAGATAGAACTAGTACTCACTCTTTATTTGCAGTAACTCCGCAAAAATGCTGCAAAAGAAACTCCAGGCTATTTCTCCCCAAATTTAGCACCCTAGAGGCCTGAAAGAATCAAAATGTTCCTACTTAGGGAAAAAATGCTAAATAATTAAAATTTCTTTCGTGTATGTGCTTCTTAGTCGCCACAATATGAGATTCAAAGCTTTTTAACTAATCCTATTGACTTGTGTCTTACAACACATATCAGAAGTTACTAAACTTCAGGAGATTGTTGAAATTATCTGCTAAAAGAACAAGTAAAAACCCAGCGTTGTGCAAATCGTTGCCAGTTATCCCTTTAATGGTATAATTAACTAAAACATTCTCAAAATAGCTTAGTTCAGTGTCCTTTGTAACGGAGAAAACTTCTACTTTTTCATTTCCAGGCATAGAGGTAACGAGAGGAAGAAAGCAGGATACTAAATTCAAAAGTAATACGTTGCCATCATTCTTCTTCCATAAAGCAAATGGTGTATGTTAAGAAAACTGGATCTCCTATGTTTTACAGGAAATATTATGGAAAAGAATAGGAAATCATCACTGAAACAAAATCAAACCTGTCCTGTGTCAAAGAGATTGCAGACATATATGCCGAAGTCCCGTTGAAGCCAGATAATATCTCGATCTGCTCCATGCATTATCTAATTAAATAAACAGATTTCAGAGTACAGAACATATATTTTAGACCTTTTGTAAAGGAAAATAAAGTATCCCAGGAAAAACCTTTTTCTTTTTAGGGTCTTTGAATATCTCCCTTAAATAAGGACCAATGTGAATACGAAGCTTAAATGTATCAACTATATAATCCTCTGTTCTGGTGGAAATTTGCATCAAGCATGTCAATCCTTGAAAAGATCGATACTGATTATGCTCCAGATCAACCTAAGCAGAGCAAAACGAAAAAACTTAAGAGAAGGGAGAGAATTTTAGGTAACGCAACAACAGAAACTTATATTGGTGGTTCAGTATTATTCTCAAGAAACTCTGTAAAAGTGTATGACCAAGTAACAATCCATTACATAATAATGATAGAATCATCACATTTCTTACTACTTCTACCAAGAGACATTATGATCAAACAATTCACTGCAGTCTGCACATTGGACTACTAAAGACAATCAGAAAAGAAATTTACCGCAAACTCTTCAACACCACGCAGTTTAGCAACTAATTCTTTTAGATCTTTCACTTCCTGAACAAACTTGAATGGAGTCTCTTCGAGTGGTAGGGGCTTAACAGGTTCCATCTCGTTTAAATCTTTGTCAACGAAGTCAAGCACTGAAAGTTTCTCCTGCATAGTATTATAAACATATAAAAAGAGAGAAATCTGCCAAGGAAAGGCCAAATGCTGACAGACAAACATTAACCCTAAGAAAGTTAAGAGCAAATCTTATCCCGAGGCACCTTTTCATCAATACAAACCATAAGCTTACAGATTCTAGAGTCTTAATGAGGCAGTTAAGAACACAGGTAATGCTAACCAAAATACACTCAAATATTGGCAGCACAGGGCACAGGTATTTTCATATAAATTCTCACTACACTCAAATAGAAATTCTTTCATTCTACATTATATTGGCAGCATCCTCCCTAAATTGAGCCAATTTTCATATAAAGTCTAACTCTTTACAAAGTTCAAACCATAGTTCCAAAACATCTACACACTAACCAGTGGATGCATGACCCGCTGATCGTCCTCGCTCCTCTCCAACCAAACATGCTCAAACGGCTGATTCGCGTTGTTCACCAGTATGTTATACTCCTCTTGAGGCTTCTTTATGGTTGGTACATGGAAAGGAACTTTAGCCTTACCAGATGAATTCTTATCCCGCTCAGCCATCTTAACGTCAATCACCGAACCACCATTAGCCGCCAAGCCCGTAATCACATTACCGACGGGCTTTTTCTTCTTCCCATAAACCATCTGAAACCCATCATCCCCATTATAAGCCACAGGCCGACCAATTTCTTCTTCTTTCTTCCGAATCCTCTGAAACTCATCAACAGAAACATCAAATCTCTCGATAAATTCATCATTCACGTTACAAAGCCAATCCTCAGCATCAACTTCATCAACATCGCCAGGAAACTTCATCGATTTCCCCCAAACTTGCTCGGAATCACCGATCGTCTCGAGAACTGATTGCGAGCTTCCAGCTATATCATCGATTGGGCGTTTGAACTCATCGAAATTGTAGTAAAAATGAAAATCTCTACTCGACGGAATCAGACGAGAAGACGATGAGAGTTTCGAGAGTGTCGAAGAGAAAGAACCATCGACTAATGTTTCCAGGGACTTTACCTTCCAAGAAACCGGTGATTCGTCGACGTCCATGGTACCATCGCTCAT
CDS Sequence
- >fgenesh1_pg.C_scaffold_7002750
ATGAGCGATGGTACCATGGACGTCGACGAATCACCGGTTTCTTGGAAGGTAAAGTCCCTGGAAACATTAGTCGATGGTTCTTTCTCTTCGACACTCTCGAAACTCTCATCGTCTTCTCGTCTGATTCCGTCGAGTAGAGATTTTCATTTTTACTACAATTTCGATGAGTTCAAACGCCCAATCGATGATATAGCTGGAAGCTCGCAATCAGTTCTCGAGACGATCGGTGATTCCGAGCAAGTTTGGGGGAAATCGATGAAGTTTCCTGGCGATGTTGATGAAGTTGATGCTGAGGATTGGCTTTGTAACGTGAATGATGAATTTATCGAGAGATTTGATGTTTCTGTTGATGAGTTTCAGAGGATTCGGAAGAAAGAAGAAGAAATTGGTCGGCCTGTGGCTTATAATGGGGATGATGGGTTTCAGATGGTTTATGGGAAGAAGAAAAAGCCCGTCGGTAATGTGATTACGGGCTTGGCGGCTAATGGTGGTTCGGTGATTGACGTTAAGATGGCTGAGCGGGATAAGAATTCATCTGGTAAGGCTAAAGTTCCTTTCCATGTACCAACCATAAAGAAGCCTCAAGAGGAGTATAACATACTGGTGAACAACGCGAATCAGCCGTTTGAGCATGTTTGGTTGGAGAGGAGCGAGGACGATCAGCGGGTCATGCATCCACTGGAGAAACTTTCAGTGCTTGACTTCGTTGACAAAGATTTAAACGAGATGGAACCTGTTAAGCCCCTACCACTCGAAGAGACTCCATTCAAGTTTGTTCAGGAAGTGAAAGATCTAAAAGAATTAGTTGCTAAACTGCGTGGTGTTGAAGAGTTTGCGGTTGATCTGGAGCATAATCAGTATCGATCTTTTCAAGGATTGACATGCTTGATGCAAATTTCCACCAGAACAGAGGATTATATAGTTGATACATTTAAGCTTCGTATTCACATTGGTCCTTATTTAAGGGAGATATTCAAAGACCCTAAAAAGAAAAAGATAATGCATGGAGCAGATCGAGATATTATCTGGCTTCAACGGGACTTCGGCATATATGTCTGCAATCTCTTTGACACAGGACAGGCCTCTAGGGTGCTAAATTTGGGGAGAAATAGCCTGGAGTTTCTTTTGCAGCATTTTTGCGGAGTTACTGCAAATAAAGAATACCAAAATGCAGACTGGAGAATTCGACCCCTTCCAGAGGAAATGACAAGATATGCAAGAGAAGATACCCACTATCTTTTATACATATATGATGTAATGAGACTAGAACTTGAACGAATGGCAAAGGATGACGAGCATACTGACTCTCCTCTGCTTCAGGTCTACAAGCGGAGTTACGATGTGTGCACACAACTATATGAGAAAGAGCTATTGACCGAGAATTCATATCTTCACGTATATGGGCTTCAAGCAGCGGGCTTTAATGCAGCTCAACTTGCCATTGTTGCGGGGCTTTGCGAATGGAGGGATTTCATTGCACGTGCAGAGGATGAGAGCACTGGTTATGTATTGCCAAACAAAGTTCTCCTTGAAATAGCCAAGGAGATGCCTGTTAGTGTTGGCAAATTGCGTCGGATGTTGAAGTCAAAGCATCCTTATATCGAGCGTAATGTTGATTCGGTGGTCAGTGTCATCAGGCAATCAATGCAAAATTCTGCAGCATTTGAGTCTGCCGCTTTATCTTTAAAAGATGTGTCTCCTGGAACTGTAATGGATAAGAATATTGAACATATTAGTGAGAAGAAAGACATGCACGCAGTAGATGTAGCTTCTCCAAGTTTGAAGGAAAATTCTTCGCAGCTTGAGAGTACCAGGGACCTAAATATGGATGCAGCAAATACTAATGAAGGGAGCGGTTTAGGCACCGGCTTGTTTGGTTCTGCTAAGGTTTCTGCGGCTGTTAGGATTTCTAAGAAACCGAGCAGTGGTTTAGGAGCATTGCTGGGAAGTGCAGCCTCGAAGAAGAAATCTCGAACTGATGAGAAGGTGAAGGAAGATGTGAAGCTCGAACAGATAAGATCATCTGTAAACCTGTCATTCCATTCGTTTACAGAGAAAGTTCCTGACTCAAAGTCAACTACTGAAACAACTCCGAAGGTTTATGGGAAGCCTGAAGAGATGTTCACTACTATGCAAGCCTCTGTTTCCAAGGAAGATGGTGTGACAGAGTTGAAAGATGATTCAGAAGAAGCCTCAGAGATTGTTGGTACTTCTGGTAGAGTTTCAGAGTCCAAAGTATTTGGCTCCAAGACAGGCGATATTATACTATTAGAAAATGGTGATGAGAAAGAAGTTGAGGCTGAAGATGAACCAATGTCTCTGTCTGAGTTGTCCACAAACTTTCAGAAGTGCTTTAAGTCCATGAAAAAGAGCAACAAGGCCCAAAAGCAGACCGAGTTTTTAAACATAGAGCCGTTTGATTATGAAGCTGCAAGGAAAGAGGTGAAATTTGGTGAAGGACACAAGGGAAGACAAGGAAAGAAAGAAGTTGCAGCAGGTCAGAAGAAGAAGGGGTCTGGACCGGAGCAGTCAGAGTTTGGTCAAGGAAAACGGCGTCAAGCTTTTCCGGCATCTGGGAACCGAAGTGCGACCTTTAAAAGTTAG
Protein Sequence
- >fgenesh1_pg.C_scaffold_7002750
MSDGTMDVDESPVSWKVKSLETLVDGSFSSTLSKLSSSSRLIPSSRDFHFYYNFDEFKRPIDDIAGSSQSVLETIGDSEQVWGKSMKFPGDVDEVDAEDWLCNVNDEFIERFDVSVDEFQRIRKKEEEIGRPVAYNGDDGFQMVYGKKKKPVGNVITGLAANGGSVIDVKMAERDKNSSGKAKVPFHVPTIKKPQEEYNILVNNANQPFEHVWLERSEDDQRVMHPLEKLSVLDFVDKDLNEMEPVKPLPLEETPFKFVQEVKDLKELVAKLRGVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKIMHGADRDIIWLQRDFGIYVCNLFDTGQASRVLNLGRNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYIYDVMRLELERMAKDDEHTDSPLLQVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNAAQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPVSVGKLRRMLKSKHPYIERNVDSVVSVIRQSMQNSAAFESAALSLKDVSPGTVMDKNIEHISEKKDMHAVDVASPSLKENSSQLESTRDLNMDAANTNEGSGLGTGLFGSAKVSAAVRISKKPSSGLGALLGSAASKKKSRTDEKVKEDVKLEQIRSSVNLSFHSFTEKVPDSKSTTETTPKVYGKPEEMFTTMQASVSKEDGVTELKDDSEEASEIVGTSGRVSESKVFGSKTGDIILLENGDEKEVEAEDEPMSLSELSTNFQKCFKSMKKSNKAQKQTEFLNIEPFDYEAARKEVKFGEGHKGRQGKKEVAAGQKKKGSGPEQSEFGQGKRRQAFPASGNRSATFKS