Information report for fgenesh1_pg.C_scaffold_6002349
Gene Details
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Functional Annotation
- Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.
Homologous
- Arabidopsis thaliana: AT3G05120
- Brassica napus: BnaC07G0343000ZS, BnaA06G0350800ZS
- Brassica oleracea: Bo7g093470
- Brassica rapa: Bra009970, Bra039460
- Gossypium hirsutum: Gohir.D08G229900, Gohir.A08G212900, Gohir.D13G178300, Gohir.A11G260500, Gohir.A13G172500, Gohir.D13G178200
- Juglans regia: Jr08_22960, Jr08_22040
- Manihot esculenta: MANES_08G124700, MANES_09G161600
- Populus trichocarpa: POPTR_013G028700v3, POPTR_005G040600v3
Gene Resources
- Pfam: PF07859
- UniProt: D7M662
- EMBL: GL348718
- AlphaFoldDB: D7M662
- KEGG: aly:9310450
- InterPro: IPR002168 , IPR013094 , IPR029058 , IPR050466
- PANTHER: PTHR23024 , PTHR23024:SF492
- SUPFAM: SSF53474
- PROSITE: PS01173
- Gene3D: 3.40.50.1820
- OrthoDB: D7M662
- eggNOG: KOG1515
- STRING: 81972.D7M662
- HOGENOM: CLU_012494_22_1_1
Sequences
gDNA Sequence
- >fgenesh1_pg.C_scaffold_6002349
CATTGGCATTCTGCGTTTACAAATGCAGCTATCTCGTCCATAACGGTGTGGAAATGATTGTTGTTAGGTAATAAGTAGAAGCCAATGGTGGCTTGCTCCAAGTAGAGAAGCTTCACATCTTGACCCGCTTTCTTGAGTCCTTCTGCATACTTCAATTGCCAATCTTGAATCAAATCTAAACCCGCTACAACGACCAGACTCTTGGGGAAACTCAACCCTTCTAAACTCTTGCTTCTCGGGCCAAACGGGCTACACGCTGGATGCTCTCTGTCTTCACCCTCCGGAAGAAACGCTCTCCAATACCAATCTCGGTCTCTAACCGTCACAAAGTATTTCCCATCCAAACGTTTCTCAGATTCCGTTCTCTCGGTCCCTCCAAACATAGGGTTAAGCAAAATGTTCCCCAAAACATTGATCCCCGACTCAACTGCTCTTAGTGCAACATTATGCACAATGTTACCCCCAGAGCTATCACCCACCAAGAAAATATGAACCTTTGAGTCTTTCTTGCTTTTAAGCCAAGAACTAGAGTTGACCCAATTCAAAACAGCCCAGCCATCATCATAAGCACAAGGGTATCGATTCTCTGGTGCACGACGATAGTTCACAGAGACAACAACAGCACCACACAAACCAACAAGCCTACGGCAAAGAGTATCATAAATAGCACTGTTTGCAGAAGAATGTGCAAAGCTTCCACCATGGAAGAAGACAATAACAGGCACTATTTCACCATCAACGGGATTCTGAAGATCGGTAACACTTGGTGGGGGACCAGCATTAGCCGGTCTGTATACTCGGCTAAGCAGATTGGTTTGGCGATCGATGATAACATCGAACGAGAAGACCCCATTAACAGGGTTGGCGTTTGCAGGGACTTTCCGGTCTAGAAACTCTGCAAGATGGCGGTTAAAAGTTCCGTCAGGGCGGCGCAGGAGATTGTAGGCTAGCTTAAAGTTGGATATCAAAACCCATGTATTGAGAGGCACCACTGTCTGCAACAAAAACATGGAACATGGAACTATTAACAAAAACAACAAAACTTTATATGACATAAAAAAAGCTTCTTCAAATTTGATTAAAGGTCCATAAAGAGTCTTAGTCTTCTGCCAACTAATTAGCAAGTTGATTTGATATGATTTCAACACTTAACAGTAGAAACAGTCAAGAAATGGACAACAAAATCAAAAGTGAAAAATCAAGAACTACCAAAAATCTGATTTTGCCCAGAATCAAAATCAGTCACTAGAGAAAGAGAAAAACTAAAAGCCAAATAAAGCCAAGAAAAGCTCCTAAATTAGTAAAGACCCATCAAGCAACCGACACGTTTCATTACCCCAAACGATGAAAGCTCTAAGCTTTGATTACTTAAAAAAACACATAACTAAACACCACAAAACTAAGAACAATCCATGAACACAGTTAATATCCAAAATCACAAAAGACCCATCTAACAATTACAATCATAAATTGACACCAAAATCAATAAAAAAAGGTCTTACCTTGCTCTCAATAAGATTAACTTCTTCACTCCCAGCCAT
CDS Sequence
- >fgenesh1_pg.C_scaffold_6002349
ATGGCTGGGAGTGAAGAAGTTAATCTTATTGAGAGCAAGACAGTGGTGCCTCTCAATACATGGGTTTTGATATCCAACTTTAAGCTAGCCTACAATCTCCTGCGCCGCCCTGACGGAACTTTTAACCGCCATCTTGCAGAGTTTCTAGACCGGAAAGTCCCTGCAAACGCCAACCCTGTTAATGGGGTCTTCTCGTTCGATGTTATCATCGATCGCCAAACCAATCTGCTTAGCCGAGTATACAGACCGGCTAATGCTGGTCCCCCACCAAGTGTTACCGATCTTCAGAATCCCGTTGATGGTGAAATAGTGCCTGTTATTGTCTTCTTCCATGGTGGAAGCTTTGCACATTCTTCTGCAAACAGTGCTATTTATGATACTCTTTGCCGTAGGCTTGTTGGTTTGTGTGGTGCTGTTGTTGTCTCTGTGAACTATCGTCGTGCACCAGAGAATCGATACCCTTGTGCTTATGATGATGGCTGGGCTGTTTTGAATTGGGTCAACTCTAGTTCTTGGCTTAAAAGCAAGAAAGACTCAAAGGTTCATATTTTCTTGGTGGGTGATAGCTCTGGGGGTAACATTGTGCATAATGTTGCACTAAGAGCAGTTGAGTCGGGGATCAATGTTTTGGGGAACATTTTGCTTAACCCTATGTTTGGAGGGACCGAGAGAACGGAATCTGAGAAACGTTTGGATGGGAAATACTTTGTGACGGTTAGAGACCGAGATTGGTATTGGAGAGCGTTTCTTCCGGAGGGTGAAGACAGAGAGCATCCAGCGTGTAGCCCGTTTGGCCCGAGAAGCAAGAGTTTAGAAGGGTTGAGTTTCCCCAAGAGTCTGGTCGTTGTAGCGGGTTTAGATTTGATTCAAGATTGGCAATTGAAGTATGCAGAAGGACTCAAGAAAGCGGGTCAAGATGTGAAGCTTCTCTACTTGGAGCAAGCCACCATTGGCTTCTACTTATTACCTAACAACAATCATTTCCACACCGTTATGGACGAGATAGCTGCATTTGTAAACGCAGAATGCCAATGA
Protein Sequence
- >fgenesh1_pg.C_scaffold_6002349
MAGSEEVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPANAGPPPSVTDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLNWVNSSSWLKSKKDSKVHIFLVGDSSGGNIVHNVALRAVESGINVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQDVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVNAECQ