Information report for fgenesh1_pg.C_scaffold_2000245
Gene Details
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Functional Annotation
- Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.
Homologous
- Actinidia chinensis: CEY00_Acc09721, CEY00_Acc17486
- Brassica napus: BnaA09G0156700ZS, BnaC09G0172400ZS
- Brassica oleracea: Bo9g037420
- Brassica rapa: Bra027050
- Gossypium hirsutum: Gohir.D06G157300, Gohir.A06G151100, Gohir.D05G176100, Gohir.A05G173100
- Juglans regia: Jr03_11820
- Manihot esculenta: MANES_16G003000
- Populus trichocarpa: POPTR_011G011100v3
- Prunus avium: Pav_sc0000824.1_g140.1.mk
- Prunus persica: PRUPE_4G015200
- Rosa chinensis: RchiOBHm_Chr5g0002121
- Vitis vinifera: VIT_10s0116g00190
Gene Resources
- Pfam: PF03789 PF05920 PF03790 PF03791
- UniProt: D7KUR5
- RefSeq: XP_002886473.1
- EMBL: GL348714
- AlphaFoldDB: D7KUR5
- InterPro: IPR001356 , IPR005539 , IPR005540 , IPR005541 , IPR008422 , IPR009057 , IPR017970 , IPR050224
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS00027 , PS50071 , PS51213
- Gene3D: 1.10.10.60
- CDD: cd00086
- eggNOG: KOG0773
- STRING: 81972.D7KUR5
- HOGENOM: CLU_040111_0_0_1
Sequences
gDNA Sequence
- >fgenesh1_pg.C_scaffold_2000245
TGGAGAGTGGTTCCAACAGCACTTCTTGTCCAATGGCTTTTGCCGGGGATAATAGTGATGGTCCGATGTGTCCTATGATGATGATGATGCCGCCCATCATGACATCACATCAACATCATGGTCATCATCATCAACATCAACAACAAGAACATGATGGTTATGCATATCAGTCACACCACCAACAAAGTAGTTCCCTTTTTCTTCAATCACTAGCTCCTCCTCCCCAAGGAACTAAGAACAAAGTCGCTTCTTCTTCTTCTCCTTCCTCTTGTGCTCCTGCTTATTCCCTAATGGAGATCCATCATAACGAAATCGTTGCCGGAGGGATCAACCCTTGCTCCTCTTCCTCTTCTTCGGCCTCTGTCAAGGCCAAGATCATGGCTCATCCTCACTACCACCGCCTCTTGGCCGCTTATGTCAATTGTCAGAAGGTGATGAGAGAACAAACCCTGAAAAAAATTATTCTTTGGAAGCTTCTTCTTAACTCTAATGATCCTTATTTGATCTTATTACACAAAGAAGAAGAAGATTCTAGAAACCCTAATTACCAAACTTTACCTTTTCTTTCTTTTTAACTTAACCCCTTTACTTGATGTTTTAGTTTGATTTTGATATCTCCTTTTGTTTACTAGTTACTTAACCCAACTAAATATATACAAACAAAGGAAACAATTTTTCCTATTTTGAGAAAATTTCAATAAAATTGTAACTAAAAGTCTAAAAACAAAGAATTTTTTTAAAAACCCTATTTTCAAGAGATTATCCATAATATTGTATGAGGCTTGAAGATTATGACATATTTATCTTTCATCATTTTCTTTACTTTATGAAATCTCACAAAGTAAACTTGAGGATCCTTATCTTAGTTTAATTAATGTTTTTATGCCTATTATGTACTAATTACACAAATATTAAGGTTGGAGCACCACCGGAGGTTGTGGTGAGACTGGAGGAGGCATGCTCGTCTGCGGCCGCCGCCGCCGCATCGATGGGACCAACAGGGTGTCTAGGTGAAGATCCAGGGCTTGATCAATTTATGGAAGCTTACTGTGAAATGCTTGTTAAGTATGAGCAAGAGCTCTCCAAACCATTCAAGGAAGCTATGGTCTTCCTTCAACGTGTCGAGTGTCAATTCAAATCCCTCTCTCTATCCTCACCTTCCTCTTTCTCCGGTTACTTTCTCTCTCTAGTCGGTTCTCTGTTTTTTTTTTAAATTATTAAATTGATTTTTTTGTTAATTATGGCGTCAAATTAAACGTAAGATGAGAAAAGGTTGTTTTTTTCTTTGTGGGTTTTAAGAAAGATTTTTCCTTTTCTGATTTTTCTTGGGTTTAATACCCCTTTGATGGTTGTTACTAGGGTTAGGGTCAGATTGTTATGTATAGCTTACTAGGTTTACGTGGATAAACTATCTATACATAGTTAGTGTATGTAGATGTTTTCATTGAATTAAAAACAGTTTGTTTACTGTTTTTTTTTGTTTTGTTTGGTATTGAATTTATTTTGCTTTGGTACAACAACAGTCACTATTCTTGTCTCTTTCTTCTCCGTTTGTTTTGGATCTATTTAATTCAAATGCATCAAAAAGAATATCTGGATCTAGACTCTGCTCGTCCTTAGATCTATTGCTCAATTTAGACATACACATGTTTTTGTACGTATAATCACATAAACATATATCTACACAATGTCATATCACTCTTTTTTTCAAGAATGTAGCTAAGTTTGTATAGACATATAAACTCACTTCACATGGTACGTTGAATTAGTTGGATCACTAGCCTATTCTTTTTTCGTTTCCCTATACACAAGGTTTGTTGACGAACTTGTCTTGTATTCACATGTTTGATCAACGTAGGTTATGGAGAGACAGCAATTGATAGGAACAATAATGGGTCATCGGAGGAAGAAGTCGATATGAATAATGAATTTGTAGATCCGCAAGCTGAGGATAGGGAGCTTAAAGGACAGCTCTTGCGCAAGTACAGTGGTTACTTAGGGAGCCTCAAGCAAGAGTTCATGAAGAAGAGGAAGAAAGGAAAGCTCCCTAAAGAAGCTCGCCAACAATTGCTTGATTGGTGGAGCCGCCACTACAAATGGCCTTACCCTTCGGTAACTTTCTTCTCTTATACTCTCATTAAGCGCATTTGTATGATTGCAAATCATAGTGAAGATGATTACATTGAACTTATTTGTCTTTTTAGCTCATGTTGTTTGTGATTTTTGCTTCCATACTATTGTTAGGGGCATTAGTTTATTTAGCTCATAGTTTCACTGATTCATGCATTGCACAATTTAAAATCCTAATCACGATGAATAATTGAACTTATCTGGTCAATATAATGTTTTTGATCTATTAGTTGATGACAACTTGATTCTTGCTAGCTTCCGTACTTTTTAAGGGTCCGTCCGGATCTTATGTCAATTCACCTTAAGAGAAGGACCAATTTCATCTTATGGCTATACCATAACTTAGCCTAAACTTTGTTTCACATATTTCAAGTCATAACTTTGGAAAGTAGCTCTAATGGAATAGTAGCTTATGTCTTTAATACATTTATAGTGTCATTACCTAAGTTCGTATGCTTTAAGATGGATTCTATGTTACCGTTCCAGTCTACGAAATCGTTGATGTAGCTGTGATCATGGACGGACCCTTTATCGTAGAGCATAAGAATACAACATTGTAAATGTTTATAAGAAAACTTGATGATTGACACGTTTTTTCTTCATGTGGTTATGAATTGGCAGGAGCAACAGAAGCTCGCGCTGGCGGAATCAACAGGGCTGGACCAGAAACAGATAAACAATTGGTTCATAAACCAGAGGAAGCGGCATTGGAAGCCATCTGAGGATATGCAGTTTGTAGTAATGGACGCAACACATCCTCACCATTACTTCATGGATAATGTCTTGGGCAATCCTTTCCCAATGGATCACATCTCCTCCACCATGCTTTGA
CDS Sequence
- >fgenesh1_pg.C_scaffold_2000245
ATGGAGAGTGGTTCCAACAGCACTTCTTGTCCAATGGCTTTTGCCGGGGATAATAGTGATGCTCCTCCTCCCCAAGGAACTAAGAACAAAGTCGCTTCTTCTTCTTCTCCTTCCTCTTGTGCTCCTGCTTATTCCCTAATGGAGATCCATCATAACGAAATCGTTGCCGGAGGGATCAACCCTTGCTCCTCTTCCTCTTCTTCGGCCTCTGTCAAGGCCAAGATCATGGCTCATCCTCACTACCACCGCCTCTTGGCCGCTTATGTCAATTGTCAGAAGGTTGGAGCACCACCGGAGGTTGTGGTGAGACTGGAGGAGGCATGCTCGTCTGCGGCCGCCGCCGCCGCATCGATGGGACCAACAGGGTGTCTAGGTGAAGATCCAGGGCTTGATCAATTTATGGAAGCTTACTGTGAAATGCTTGTTAAGTATGAGCAAGAGCTCTCCAAACCATTCAAGGAAGCTATGGTCTTCCTTCAACGTGTCGAGTGTCAATTCAAATCCCTCTCTCTATCCTCACCTTCCTCTTTCTCCGGTTATGGAGAGACAGCAATTGATAGGAACAATAATGGGTCATCGGAGGAAGAAGTCGATATGAATAATGAATTTGTAGATCCGCAAGCTGAGGATAGGGAGCTTAAAGGACAGCTCTTGCGCAAGTACAGTGGTTACTTAGGGAGCCTCAAGCAAGAGTTCATGAAGAAGAGGAAGAAAGGAAAGCTCCCTAAAGAAGCTCGCCAACAATTGCTTGATTGGTGGAGCCGCCACTACAAATGGCCTTACCCTTCGGAGCAACAGAAGCTCGCGCTGGCGGAATCAACAGGGCTGGACCAGAAACAGATAAACAATTGGTTCATAAACCAGAGGAAGCGGCATTGGAAGCCATCTGAGGATATGCAGTTTGTAGTAATGGACGCAACACATCCTCACCATTACTTCATGGATAATGTCTTGGGCAATCCTTTCCCAATGGATCACATCTCCTCCACCATGCTTTGA
Protein Sequence
- >fgenesh1_pg.C_scaffold_2000245
MESGSNSTSCPMAFAGDNSDAPPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVVRLEEACSSAAAAAASMGPTGCLGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHHYFMDNVLGNPFPMDHISSTML