Information report for FCD_00012132
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Arabidopsis thaliana: AT1G01040
- Brassica napus: BnaA10G0008800ZS, BnaC05G0010300ZS
- Brassica oleracea: Bo5g002780
- Brassica rapa: Bra033293
- Citrullus lanatus: Cla97C05G079940
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Medicago truncatula: Medtr7g118350
- Setaria viridis: SEVIR_9G565900v2
Sequences
CDS Sequence
- >FCD_00012132
ATGGACGGGGAATCTAGGGTTTTGGCGAACCCTATGTCGGTCCGAGCGCCGAAGGAGGAGGAAGAGGACGGCCTCGTCGGCGATTTCTTCGGCGGAATCGACCACATTCTCGACAGCTTCAAGAACGGCGACGGCCTCCCTCCGCTCCCGGAGTTTGGCGGTAACGGCGGCAGCAGCCACCTCGGAGACAGCTGCTTCTTCCAGAATGGGGTGTCGTCGGCGGAGACGATAACGACGACGATTATGCGGGTGGATTCTTCTTCGATTGCCCAGCCTAACGGAATTTACCAGAATGGTCTCCAAAATGGCGAAGTTCGACCAGCGAGCAAGTTGGCTAATGGCAGTGTGGAGCAGAGTCCCGTCCCGTGCCGCGAGAACGGTGAAAACGGAATTCGGAAGCATGAGAACGGCGACGACAGGTGCGGCAAGAGGGCTCGGTTCGGCAATGGCAAGAGCGAGAGGTACGGGCCGGGCAGGGGACAGTATCACGGCAGGGAGAGGGAGAGGGAGAGGTGTGCTGGTCGGAAGAGGGTGCGGGATTGGGACGAGATTGATAGGAGAGAAAGAGATTGCGTCAGGAGGAAAGAGCATTATAGTAACAATAGGAGGGACGGTAGAGAAAGGGACTTGAGAGATAGGGAGTCAAGGGGCTATTGGGAGAGGGATAAATCAGGTTCCAATGAAATGGTTTTTCGCATTGGCTCCTATGAAGCCGACCGCAACAGAGAGGCGAAGGCGGGCAATGACAAAAACCAGGAAAGTATTGAGAAAGACGAGAATAAGTTGGAAGAGATTAAAGAGAAAATACCTGAGGAACAAGCGCGAAAATACCAATTGGATGTTCTTGATCAGGCTAAGAAGAAAAACACTATTGCTTTCCTCGAGACAGGGGCGGGGAAGACACTGATAGCTGTTCTCCTAATCAAAAGCCTTAGTAATGAGTTGCAAAAGCAGAACAAGAAAATGCTTGCCGTGCAAGCTGAAGCTATTCGTGAGAGAACTGGTTACCAAGTTGGCCATTACTGCGGTGAAATGGGTCAGGATTTCTGGGATGCTCGAAGATGGATGCGAGAGTTTGAAACAAAACAGGTTCTAGTAATGACTGCCCAAATTCTCTTGAACATTCTGAGACACAGCATAATAAAAATGGAAGCAATCAATCTTTTGATTTTGGACGAGTGCCATCATGCCGTGAAGAAACATCCGTATTCTTTGGTGATGTCTGAGTTCTATCATACAACACCCAAGGAGAAGAGACCATCTGTATTTGGAATGACTGCTTCTCCTGTAAATTTAAAGGTAGATTGTGCAATCAAGATTCGTAATCTTGAAAGTAAACTAGATTCCACAGTTTGTACCATTAAAGACCGTAAAGAGCTAGAAAAATATGTCCCGATGCCCTCTGAACGGGTGGTGGAGTATGACAAAGCAGCCAACTTGTGGTCCCTTCATGAGCAGATAAAACAAATAGAAGTAGAAGTTGAAGAAGCTGCAAAATCAAGCTCCAGAAGAAGCAAATGGCAATTTATGGGAGCCAGAGATGCTGGAGCCAAGGAAGAGCTGCGCCAAGTTTACGGTGTTTCAGAAAGAACAGAAAGTGATGGGGCTGTTAATTTAATTCAAAAGTTGAGGGCTGTAAATTATGCACTTGGTGAACTGGGTCAATGGTGTGCTTACAAGGTTGCACAATCTTTCCTGGCAGCTTTACAGAATGACGAGAGGGCAAACTACCAGCTTGATGTTAAGTTTCAAGAGTCCTACCTGAGCAAGGTTGTCTCTCTTTTACAATGTCATTTGTCAGAGGGAGCTGTCTCTGAGAAGGATAAACTCTCAGATTCAGAGAGCGAAGTTCCTCACGACGGCACTGATTCTAATGAGATTGAGGAGGGAGAGCTTCCCGACAGTCACGTTGTCTCCGGTGGCGAGCATGTGGATGTGATTATAGGAGCTGCTGTAGCTGATGGAAAAGTGACACCAAAAGTGCAATCACTAGTTAAAATACTTCTTACATATCAGCATACAGAAGATTTTCGTGCAATTATCTTTGTGGAGCGTGTTGTGTCTGCTTTGGTTCTTCCGAAGGTCTTTGCAGAACTCCCGTCTCTAGGTTTCGTTAGGTGTGCTAGCTTGATTGGTCATAACAATAGTCAGGAAATGCGAACTTGCCAAATGCAGGACACGATAGCCAAATTCCGGGATGGTCGTGTTACATTGTTAGTTGCTACTAGTGTTGCTGAGGAAGGGCTTGATATTCGGCAATGTAATGTAGTTATTCGTTTTGATCTTGCCAAAACTGTATTGGCTTATATTCAGGGGAATCTATCACATGAAGCATTCTTGAGGAATGCCAGAAATAGTGAGGAAACCTTACGGAAAGAAGCAATTGAGAGAACTGACCTGAGTCATCTAAAGGATACTTCTAGGCTAATTTCAATTGATACAACGCCAGGTACTATGTACCAGGTGGAGTCAACGGGTGCTGTTGTGAGCTTAAATTCTGCTGTTGGACTCATCCATTTTTACTGCTCTCAGCTGCCCAGTGACAGTTGCTGTCGTATGCATTTTGAAGGTATTCAATACTTCGTCCAGAGTTTTGTCATGGTAAGGCATGAGAAGCAGGAGGTCCCACTGAATATTCATGCAAGCTTCAACTTCCTTGTAATGCCCCATTTGAGACACTTGAGGGTCCCATATGCAGTTCAATGCGCCTTGCACAACAGGCATGCTGTTTGTTTGGCTGCTTGCAAGAAGCTGCATGAGATGGGAGCATTTACTGACATGCTTTTGCCAGACAAGGGAATTGGAGAAGAAAGAGAAAAGACGGACCAGAATCTTGAAGAAGATCCACTATCTGGGACTGCTAGGCATAGAGAGTTTTATCCTGAAGGAGTAGCTGATGTTCTGAAGGGAGAATGGATCTTATCCGGAAGGGATGTTTGCAACAACTCCAAATTGCGTTTATTTATATATGATGTGAAATGTGTAAACATAGGCTCTTCAAAAGATCCGTTCTTGACTCGGGTTTCAGATTTTGCAGTGCTTTTTGGCAATGAGCTGGATGCAGAGGTGTTATCGATGTCGATGGATCTATTTATCGCTCGAACCATGACTACAAAGGCATCGCTTGTCTTCAGGGGTTCAATAGATATCACACAAAGTCAGTTGGCATCCCTTAAGAGTTTTCATGTAAGATTGATGAGCATTGTGCTGGATGTGGACGTTGAACCTTCCACCACTCCTTGGGATCCTGCAAGGCATATTTGTTTGTCCCTGTGGTTAGCGATAACTCGACCAGATGTTTACCTTGGCACAAATGAGCGTACGTTAGGTGGAGATAGAAGGGAGTATGGGTTTGGGAAACTGCGTCATGGCATGGCTTTGGGCAGAAGTCCCATCCCACATATGAAGCATGTAGATTTTCCCCAAGGCAAACTTATAATGGCTGATTCTTCAGCCAGTGCAGAAGACTTGGTAGGGAGAATCGTAACAGCTGCTCACTCTGGGAAGAGGTTTTATGTGGATTCAATATGCTATGCAAAAAGGGGTGCATTTGGCTTTCGGGTCCTCTTTTCTATAGGTGACTCTGATGAGAGTGTAGACAAAACATACTTTGTTTTCCTCCCTCCTGAGCGGTGTTTAGTACACCCGCTGTCTGGTTCACTTGTTCGTGGAGCTCAGAGACTACCCTCGATAATGAGGAGAGTTGAAAGCATGCTTCTTGCTATTCAGCTTAAGCATATTATAAACCATCCTGTCCCGCATCAAAGATCTTGGAAGCCTTTGACAGCTGCTTCCTGTCAGGAGACATTTTGTTATGAAGGGCAGAGCTTCTTGTATGCGCTCGGCAAAGGACTTCAATCGTATATCCAAGCAGATAGCTTTGGCCCCATCCCGATGGGCTGCTCCTGGTGTGTTGCCGTCTTTGATGAGGATACAAAAGATGGAGATTCATCCTTAGTTGATCAGGGGAGATCGGTTGCTGAGAATCAGCAGGAAAAGGATCAACCTTGTGATGGATATGAAGATGATGAAATGGAGGATGGTGAGCTTGAGAGCGACTCTAGTTCTTACAGAGTTCTGTCTAGCAAGACTCTTGCAGATGTTGTGGAAGCACTTATCGGGGTCTATTATGTAGAAGGTGGGAAGAACGCTGCTAACCACCTAATGAAATGGATGGGGATTGTGCGTTTGGAATTCGTTGGTGATGCAGTCCTAGATCATCTCATCACCAAGCACTTGTTCTTCTCATACACGAATCTGCCCCCAGGCCGATTGACTGACCTGCGAGCTGCTGCTGTAAATAATGAAAATTTTGCTCGTGTAGCCGTAAGACATAATCTCCATTTGCACCTTCGCCATGATTCGGGATTTGTCAAGGAAGTTCAATCTGAATTGTCGAAGCCAGCTTTCAACTCCTTTGGTTTGGGAGACTGCAAAGCTCCAAAAGTTCTTGGTGATATTGTTGAGTCCATTGCTGGTGCTATTTTTCTTGATAGTGGACGTGATACTGCAGTAGTTACAGAATTTATTTCTGACGTCGCAACCTTCATTTTCTTAGAAAGATGCCAGCAACAAGCAGAAGGTTTGGAATACAAAGCCACTCGAAATGGCAACGTAGCTACCGTTGAAGTCTTCATTGATGGTGTCCAAGTGAGCATCGCTCAGAATCCACAAAAGAAGATGGCGCAGAAACTAGCAGCCAGGAATGCTCTTGCCGCTTTAAAAGAGAAGGAAACGGCCGAAGCAAAGGAGAAAGAGGACGAGGAGAATGGGAAGAAGAAGAAGAACGGGCCCCAAACATTTACTCGACAAACCTTGAATGATATATGCTTGCGTAGAAATTGGCCCATGCCATTCTACCGGTGTGTGAACGAGGGTGGCCCGGCACATGCGAAAAGGTTTACTTTTGCTGTGCGAGTGAATACGACAGACAAGGGGTGGACTGACGAATGTGTAGGAGAACCGATGCCAAGCGTCAAGAAGGCCAAGGACTCTGCAGCAGTGCTTCTCTTGGACCTTTTGAATAAGTTGTACTCGTGA
Protein Sequence
- >FCD_00012132
MDGESRVLANPMSVRAPKEEEEDGLVGDFFGGIDHILDSFKNGDGLPPLPEFGGNGGSSHLGDSCFFQNGVSSAETITTTIMRVDSSSIAQPNGIYQNGLQNGEVRPASKLANGSVEQSPVPCRENGENGIRKHENGDDRCGKRARFGNGKSERYGPGRGQYHGRERERERCAGRKRVRDWDEIDRRERDCVRRKEHYSNNRRDGRERDLRDRESRGYWERDKSGSNEMVFRIGSYEADRNREAKAGNDKNQESIEKDENKLEEIKEKIPEEQARKYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIKSLSNELQKQNKKMLAVQAEAIRERTGYQVGHYCGEMGQDFWDARRWMREFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKVDCAIKIRNLESKLDSTVCTIKDRKELEKYVPMPSERVVEYDKAANLWSLHEQIKQIEVEVEEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAVNLIQKLRAVNYALGELGQWCAYKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSLLQCHLSEGAVSEKDKLSDSESEVPHDGTDSNEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKILLTYQHTEDFRAIIFVERVVSALVLPKVFAELPSLGFVRCASLIGHNNSQEMRTCQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQGNLSHEAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDTTPGTMYQVESTGAVVSLNSAVGLIHFYCSQLPSDSCCRMHFEGIQYFVQSFVMVRHEKQEVPLNIHASFNFLVMPHLRHLRVPYAVQCALHNRHAVCLAACKKLHEMGAFTDMLLPDKGIGEEREKTDQNLEEDPLSGTARHREFYPEGVADVLKGEWILSGRDVCNNSKLRLFIYDVKCVNIGSSKDPFLTRVSDFAVLFGNELDAEVLSMSMDLFIARTMTTKASLVFRGSIDITQSQLASLKSFHVRLMSIVLDVDVEPSTTPWDPARHICLSLWLAITRPDVYLGTNERTLGGDRREYGFGKLRHGMALGRSPIPHMKHVDFPQGKLIMADSSASAEDLVGRIVTAAHSGKRFYVDSICYAKRGAFGFRVLFSIGDSDESVDKTYFVFLPPERCLVHPLSGSLVRGAQRLPSIMRRVESMLLAIQLKHIINHPVPHQRSWKPLTAASCQETFCYEGQSFLYALGKGLQSYIQADSFGPIPMGCSWCVAVFDEDTKDGDSSLVDQGRSVAENQQEKDQPCDGYEDDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWMGIVRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVRHNLHLHLRHDSGFVKEVQSELSKPAFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVTEFISDVATFIFLERCQQQAEGLEYKATRNGNVATVEVFIDGVQVSIAQNPQKKMAQKLAARNALAALKEKETAEAKEKEDEENGKKKKNGPQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLDLLNKLYS