Information report for evm.TU.02.1170
Gene Details
|
|
Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a
Homologous
- Citrus sinensis: orange1.1g004262m, orange1.1g004260m, orange1.1g004258m, orange1.1g004257m, orange1.1g004251m, orange1.1g004250m
- Juglans regia: WALNUT_00014989-RA, Jr12_06150, Jr12_06140
- Populus trichocarpa: Potri.014G106800.9, Potri.014G106800.8
- Prunus mume: XP_016652252.1, XP_016652251.1
- Prunus persica: Prupe.2G200400.1.p, PRUPE_2G200400
- Vitis vinifera: VIT_15s0048g02410
- Ziziphus jujuba: XP_015888949.1
Gene Resources
- Pfam: PF00249
- UniProt: A0A803NSJ3
- EMBL: UZAU01000163
- AlphaFoldDB: A0A803NSJ3
- OMA: SHYQMDR
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF174
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- CDD: cd00167
Sequences
CDS Sequence
- >evm.TU.02.1170
ATGAAAAGGAGTAGGGAAAAAGCGAAAGGGTGCGCTGATGCTGTGTATCTAGCCACTAAATTCTTGCCACTTGGCATCATCCTAAGAACTCACTCGTTTCAGGGAGGATTTGAAGCAGCGGCAGCTGCCCAGACACGAAAGCCGTATACTATTACAAAGCAACGAGAGCGATGGACAGAGGAAGAGCATAATAGGTTCCTTGAGGCCTTGAAGCTCTATGGACGAGCCTGGCAGCGTATTGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGAAGTCATGCACAGAAATTCTTTTCAAAGTTGGAAAAGGAGGCTCTCGTTAAAGGTGTTCCAGTAGGGCGCGCCATTGATATAGATATTCCACCTCCACGCCCTAAAAGGAAACCTAGCAATCCTTACCCTCGAAAGACTGGTATTGGTCCTCTCACATCACAGGTAGGAGGAAAAGATGAAAAATATTTATCAGAATCATCTTCTCACTGTAAGCAAGTACTGGATTTGGAGAAAGAGCCAGTTCTTGAGGTTATTGCCTCCTCTCCCTGTTATCTGAAACATTGTTCATTCACCCCAGTTCTTACTTCAGTTCATAATTTTTGTGCGACTTCTTTTTCTCAAAATCAGGGACCGGATGGAGATGGAAAACCAACACAGGCGAAAGAAAACCACGATGACGATTGCTCAGGTCTCACCCAGCTTCAAGATACTCAATGTTCTTCTGTTCACAAAAGCTCCCTACCTAAGCCACCTGTGGGGCTTGGAAATGCTTGCACTTTTAGGGAATTTGTGCCTTTAATGAAAAAGGCGAATCAGGATGACACAGGTGGATCTTATGTCACTGTTGAATTTGACAGGAATGAAAACAAGCAGAAGTCCGATGCCGAGGAGATGGCACAAGATAATGACACAAGCAAAGGCTTAAAGTTGGAAAATCCTAATGCTTCATATGAGAAATTGGTTGAAGGTGAAAAAATGAATGACTTGAATAATGGATTGCCAACTGAGGAGATGCAAACCACTCAAAACTACCCAAGGCATGTGCCTGTGCATGTTCTTGATGGAAACATTGGAAATTGTACTCGAACTCCTACTGACACCACATTTAATCCAATAGGAGAGATTAATGGCCACACTAATTTTTTCACAAATTCAGCGGCATCTACTACTACTGAGCATCAATCTAATGCATCAAGATCTTCAATCCATCCATCATTTCCGGTTTTACATCCTCAATTTACCTCAATTCGCCCCAATCAAGAGGACTATCAGTCCTTCCTCCATATGTCGTCCACATTTTACAGTCTCATTGTATCTACACTTCTTCAAAACCCAGTAGCACATGCCGCAGCAAGCTTTGCAGCTGCATATTGGCCCTATTCCAATGTAGAAACTTCTTCAGATTCTCTTGCATGCAACCAAACCCATGGGATGCTTCCATTGTGTACTCCCCTACACACTGGATTTGCTGTCCCTCCAGCATCCACAAGTGGAGTTCCTTCGATGGACTTTGATCAAGGTCCTGCACCCAAAACAGGAGAGGAAGACAAACCTCTTATTCTTCTATTGCAAGAACAAGTGGATCCGGAACACTCGGAAGCTGTGCAAGCTCAACATTTAGGTTCAAAATCTCCAACAGGGTCCTCATCAGACTCTGAGGAAAGTGGGGGAGGAAAACCTGATTCCAATGTAAAAGTTGCTGATCATGAAAATACTGTCCCAGCAACTGAGCTTGATTCTAATAAACCAAAAAACACCAAGCCGGTTGACCGCTCATCTTGTGGTTCCAACACAGCTTCTAGCAGTGAAGTCGAGACAGATGCCTTAGAGAAGCAAGAGAATGGCAAGGAAGAATTGCAAGAACCAGAAGCCAATCAATCAGTTTCCGAGTGTAGTAATCGTCAAGGACGGCTGGCATTTCAAGCATTATTCTCAAGAGAGGTGTTACCTCAAAGCTTTTCACCCCCACCTGACCTGATGAAGCAGGAGAATCAGAATGGCTGCATGGAAGAAAAACAAAAAGAGAACAAAGATGTAGGTGCATCATTAATAGATCTCAACAGTAAGACTTGCGGGTCTTGTTCTAACCATCCAGAATTGGAGAAAATTGGACCACTTAGAGATGAGGAAAATTTAGACGAAAGTTTGCTGACAATAGGGCTTGGACAAGGAAAGCTCAAGGTTCATAGAACAGGATTCAAACCTTACAAAAGGTGCTCAGTTGAGGCCAAAGAGAACAGCGTGGGAAATACCAGCAGCCAGGTGGAGGAGAGAGGAACCAAGAGGCTACGCTTGGAAGGAGAGGTTCAACTTAATATCTGA
Protein Sequence
- >evm.TU.02.1170
MKRSREKAKGCADAVYLATKFLPLGIILRTHSFQGGFEAAAAAQTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPVGRAIDIDIPPPRPKRKPSNPYPRKTGIGPLTSQVGGKDEKYLSESSSHCKQVLDLEKEPVLEVIASSPCYLKHCSFTPVLTSVHNFCATSFSQNQGPDGDGKPTQAKENHDDDCSGLTQLQDTQCSSVHKSSLPKPPVGLGNACTFREFVPLMKKANQDDTGGSYVTVEFDRNENKQKSDAEEMAQDNDTSKGLKLENPNASYEKLVEGEKMNDLNNGLPTEEMQTTQNYPRHVPVHVLDGNIGNCTRTPTDTTFNPIGEINGHTNFFTNSAASTTTEHQSNASRSSIHPSFPVLHPQFTSIRPNQEDYQSFLHMSSTFYSLIVSTLLQNPVAHAAASFAAAYWPYSNVETSSDSLACNQTHGMLPLCTPLHTGFAVPPASTSGVPSMDFDQGPAPKTGEEDKPLILLLQEQVDPEHSEAVQAQHLGSKSPTGSSSDSEESGGGKPDSNVKVADHENTVPATELDSNKPKNTKPVDRSSCGSNTASSSEVETDALEKQENGKEELQEPEANQSVSECSNRQGRLAFQALFSREVLPQSFSPPPDLMKQENQNGCMEEKQKENKDVGASLIDLNSKTCGSCSNHPELEKIGPLRDEENLDESLLTIGLGQGKLKVHRTGFKPYKRCSVEAKENSVGNTSSQVEERGTKRLRLEGEVQLNI