Information report for EUTSA_v10023238mg
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Brassica napus: BnaC09G0191800ZS, BnaA09G0171700ZS, BnaA06G0066100ZS, BnaA08G0288900ZS, BnaC08G0201700ZS
- Brassica oleracea: Bo9g046570, Bo5g010850, Bo8g059390
- Brassica rapa: Bra018441, Bra019938
- Daucus carota: DCAR_023771
- Gossypium hirsutum: Gohir.D03G088800, Gohir.A02G094700
- Nicotiana attenuata: A4A49_04265
- Solanum lycopersicum: Solyc04g007280.3
Gene Resources
- Pfam: PF04096
- UniProt: V4KI48
- RefSeq: XP_006392256.1
- EMBL: KI517881
- AlphaFoldDB: V4KI48
- KEGG: eus:EUTSA_v10023238mg
- OMA: WAENASE
- InterPro: IPR007230 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF6
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.10.10.2360 , 3.30.1610.10
- eggNOG: KOG0845
- STRING: 72664.V4KI48
Sequences
CDS Sequence
- >EUTSA_v10023238mg
ATGTTTGGTTCATCTAATCCTTTTGGACAGGCATCTAACAGCAGTCCATTTGGGACTCAAACTCAATCTGTGTTTGGTCAGACCAATAACGCGAGTAGTAATCCCTTTGCTCCGAAACCGTTTGGTACGTCTAATCCTTTTGGCGCACAGACAGGGAGTTCCATGTTTGGGGGCACTTCAACCGGTGTGTTTGGTGCTCCTCAAACTTCCTCCCCTTTTGGTGCTACATCACAAGGGTTTGGGAGCTCTACTCTTGCTTTTGGAGCATCTTCTGCTCCTGCATTTGGCAGTTCGTCTTCACCTTTTGGTGGCACTTCTACTTTTGGACAGAAGTCTTTTGGCTTCTCAGCGCCTCAGTCAAGTCCTTTCGGAAGCACGACACAGCAATCACAGCCTGCATTTGGAAACAACACTTTTGGCTCATCTACACCTTTTGGTGCCTCCAACACGCCTGCCTTTGGCGCATCAAACACTTTTGGCTCATCTACACCTTTTGGTGCCTCCAATACGCATGCCTTTGGTTCCTCCAGTACGCCTGCATTTGGTTCTTCCAGCACGCCTGCCTTTGGCGCATCAAATACGCCTGCATTTGGCGCATCAAACACACCTGCCTTCGGTGCATCAAGCACTCCTTCATTCGGCGCTTCGAGCTCACCTGCATTTGGCACATCACCCACTCCTGCCTTTAGAAACAATGCTTTTGGTGCATCAAGCACTCCATCTTTTAGTTTTGGCTCTTCCCCAGCTTTTGGGCAGTCTACCTCAGCATTTGGCAGTGGTTCCTTTGCTTCTACGCCATCTTCCTTTGGAGCTCAAGGTTCTTTTTTGGCTAGTGCACAGGCTTTTGGGGCTCAACAAGGAGGTAGTAGGGTCATGCCTTATGTATCTACAACTGATGCAGACTCGGCCAGTGGTACCCAGCTTCCTGGGAAACTGAAATCGATATCTGCCATGCCTGTACACAAAAATAAAAACCATGAGGAGCTTAGGTGGGAGGACTACCAACGAGGAGATAAAGGTGGACAACTTCCGGCTGCTCAATCTGGTGTAATAACTTCTCAGCCAAGTATATTCTCTCAGTCATCAGCGTTTGGTCAGCCATCTGCAAATCCAACAAACCCCTTTTCACCAGCGTTTAGTCAGCCATCTGCTAATCCAACAAACCCCTTTTCAAGCTCAGTAGCCACAAACTCTTTCGCCCAGAAGACTCCAACAGCTACCACAAGTTTTTCGTCACCCTTTGGTCCAAGCACTACTCCATCCATGTTTGCATCAACTTCATCAACTACCACATCGGTATTTGGACCATCCCCTGTTTTTTCAACAACCACAAGTCAGCCATTTGCTTCATCAAGCTCTCCTGGATTTGGCCCTTCTCCATCAATGGTTGCTTCAACTCCAGCATTTAGCACTGCTGGAAATTTTAACAACAGCCAGTCATCTTCGCTGTTTAGCTCAACCCAATTTAGACAGGGTGGTTCAGTGTTTAGTCAGCCTAGCTCTGGGTCTGCACAGACTAGTTTTTCATTTGGACCAGCTAGTTCTGCGTTTGCACAGAACACCAATCATGCGTTCCCCCAAACTAACAATTGTAGTACACCTTCCACTGGATTCGCGAACCAGTTTACAATCTCGCCATCCTTAACTACAAGCATCTCTCCTTTTGGTCAACCAACGCCTCCTGGTTCGACCTCCTACCAACCAAATCAACCACCTCAGCCATCAAGTGCTTTTAGTTTCAACAACTTTGGTCAACCCCAAACAGCTAATACAAATGGGCTTCCAGGTGGAATGGGAACTTTTAGTCAAGGCAACTCTGGGCCTGCGACGGCTAACGCTAGTGTTATGCAACCAAACCCTGTTGCAAACCCATTTGGAACGCTTCCTGCTTCACCTAAGCTTTCAATTGCTCAAGGTGGACATTCACCTTCGATTCAGTATGGAATCTCCAGCATGCCTGTCGTTGATAAACCTGCTCCTGCTAGAGTATCACCACTCTTGACTTCTCGACACCTTTTACAGAGGCGGGTCAAGCTACCTGCAAGAAAATACCGTCCTGGCGATGATGGTCCAAAGGTTCCATTTTTCAGTATCGAACAAGAGAACTCGAATACACCTAAGGCTGATGCGTTTTTCATTCCAAGGGAAAACCCTAGAGCCTTGTTTCTACGCCCAGTTGAAAAGGAAAAATCAGCTCCGCCAAAAGATGGCCCGACACCACTGCAAGAGAATGGTAAGAGTTCAAATGGTTTTACAAATGGAGCCAACCATGATGAGAGTAAGGACAACGGTGAAATTTGTGATGCTCTTCCGGTCAAAGCCAATCAGAAACCGAACAAGACATGTGAAAATCATGGAGGCGACAAAAACGTCTCGAACAGTTCACCAAGTGGAGCAGATATTGGGTCATTGTTGCCAAAGCTGCACCACGCCGAGTATTTCACACAGCCTCGGATCAAAGAATTAGCTGCAAAGGAAAGGGTTAACCCGGGTTATTGCAGGCGGGTAAAGGACTTCGTCGTTGGAAGACACGGTTACGGTACTATAAAGTTCCTAGGAGAGACTGATGTGCGTAAGCTGGACCTGGAAATGGTTGTTCAGTTCAGTAACAGGGAAGTGGTTGTGTACATGGACGAGAGCAAAAAACCACCGGTTGGTCAAGGATTGAACAAGCCTGCGGAAGTGACTCTGCTGAATATAAAATGCATAGACAAAAAGAGCGGGAAGCAAGTGAAGGAAGGCCCGAGGGTGGACAAGTATAAAGAAATGCTCAAGAGGAAAGCTGAGGAACAAGGAGCTAAGTTTGTGTCTTTTGATGCTGTTAATGGCGAATGGAAGTTTAGAGTTGAGCATTTCAGTTCTTACAAGCCTGGTGATGTAGATGACGAGTAG
Protein Sequence
- >EUTSA_v10023238mg
MFGSSNPFGQASNSSPFGTQTQSVFGQTNNASSNPFAPKPFGTSNPFGAQTGSSMFGGTSTGVFGAPQTSSPFGATSQGFGSSTLAFGASSAPAFGSSSSPFGGTSTFGQKSFGFSAPQSSPFGSTTQQSQPAFGNNTFGSSTPFGASNTPAFGASNTFGSSTPFGASNTHAFGSSSTPAFGSSSTPAFGASNTPAFGASNTPAFGASSTPSFGASSSPAFGTSPTPAFRNNAFGASSTPSFSFGSSPAFGQSTSAFGSGSFASTPSSFGAQGSFLASAQAFGAQQGGSRVMPYVSTTDADSASGTQLPGKLKSISAMPVHKNKNHEELRWEDYQRGDKGGQLPAAQSGVITSQPSIFSQSSAFGQPSANPTNPFSPAFSQPSANPTNPFSSSVATNSFAQKTPTATTSFSSPFGPSTTPSMFASTSSTTTSVFGPSPVFSTTTSQPFASSSSPGFGPSPSMVASTPAFSTAGNFNNSQSSSLFSSTQFRQGGSVFSQPSSGSAQTSFSFGPASSAFAQNTNHAFPQTNNCSTPSTGFANQFTISPSLTTSISPFGQPTPPGSTSYQPNQPPQPSSAFSFNNFGQPQTANTNGLPGGMGTFSQGNSGPATANASVMQPNPVANPFGTLPASPKLSIAQGGHSPSIQYGISSMPVVDKPAPARVSPLLTSRHLLQRRVKLPARKYRPGDDGPKVPFFSIEQENSNTPKADAFFIPRENPRALFLRPVEKEKSAPPKDGPTPLQENGKSSNGFTNGANHDESKDNGEICDALPVKANQKPNKTCENHGGDKNVSNSSPSGADIGSLLPKLHHAEYFTQPRIKELAAKERVNPGYCRRVKDFVVGRHGYGTIKFLGETDVRKLDLEMVVQFSNREVVVYMDESKKPPVGQGLNKPAEVTLLNIKCIDKKSGKQVKEGPRVDKYKEMLKRKAEEQGAKFVSFDAVNGEWKFRVEHFSSYKPGDVDDE