Information report for EUTSA_v10022520mg
Gene Details
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Functional Annotation
- Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.
Homologous
- Brassica napus: BnaA01G0420600ZS, BnaC05G0560100ZS, BnaC01G0494500ZS
- Brassica oleracea: Bo5g155130, Bo1g158920
- Brassica rapa: Bra040518, Bra039117
- Daucus carota: DCAR_007093
- Lactuca sativa: gene-LSAT_4X6960, gene-LSAT_4X181301
- Vitis vinifera: VIT_01s0026g00150
Gene Resources
- Pfam: PF05965 PF01429 PF00628 PF15612
- UniProt: V4MDW1
- RefSeq: XP_006409230.1
- EMBL: KI517392
- AlphaFoldDB: V4MDW1
- OMA: GCSHCII
- InterPro: IPR001739 , IPR001965 , IPR003888 , IPR003889 , IPR011011 , IPR013083 , IPR016177 , IPR019786 , IPR019787 , IPR036282
- PANTHER: PTHR47162 , PTHR47162:SF8
- SUPFAM: SSF47616 , SSF54171 , SSF57903
- PROSITE: PS01359 , PS50016 , PS51542 , PS51543
- Gene3D: 1.20.1050.10 , 3.30.160.360 , 3.30.40.10
- eggNOG: KOG0867
- STRING: 72664.V4MDW1
Sequences
CDS Sequence
- >EUTSA_v10022520mg
ATGGAACTCACTGATTCTACGAACGAGCAACTAGGAGAGACAAGGAGCGTCGGTCTCAAGGAAGATAATCGCTCCTTTCTCGGCATCGATCTCAACGAAATCCCTACCGGCGCTACTCTCGGCGGTGGTTGCACTGGTGCTCAGGGTGATGACGGAGAGTATGAACCTGTTGAAGTAGTTAGGTCAATTCACGATAATCCGGACCCAGCGCCTGGAGCGCCTGCGGAGGTTCCTGGGCCGGATCGGGATGCCGCGTGCGGCGCGTGTGGAAGGCCAGAGTCGATTGAACTCGTAGTAGTCTGCGACGCTTGTGAGCGAGGGTTTCATCTATGCTGTGTTAACGACGGAGTGGAGCCGGCTCCTTCCGCCGATTGGATGTGCAGCGACTGTGCTACCGGCGGGGAGAGGAGCAAACTGTGGCCGTTGGGGGTTAAGTCTAAGCTCATCCTGGATATGAACGCCTCGCCGCCGAGCGATGCGGAGGGATACGGAGGCGAGGAGACGTCAGATTCGAGAAAGCATATGCTGGCCAGCAGTTCTTGCATGGGAAACTCTTATGACTATGCAATGACGCATTCAAGCTTTTTGAAACCTGGTAGAGGACATGCTAGTCCCGAAGCGTCAGGGATAATGGCTCGTAATACTAAAATGAGTGTGGATGGATTGGATTCACATACCCTAGGTTTTGGCTTCCCGTTCAGCCTGAGCAACAGTAATTCGCCCGTTAGATTTCCATCCTTAGATCCAAGTGAGCTGTTGCTGCAAAATCTCAGGCATTTCATATCGGAAAGGCATGGACTATTAGAAGATGGTTGGCGAGTCGAATTTAAACAACCTTTGAATGGCTATCATCTATGTGCTGTGTATTGTGCTCCGAATGGAAAGACATTTAGTTCCATACAAGATGTTGCTTGTTATCTGGGCTTGGCAATGAATGAAAGATTGCAGCATATGCCCAAGAGAAGAAAGACATCAAGATGGCCAAACAATGGTTTCACTGAGCAAAAGGGTAGTTCAGTGAGTGCTCAGCTCAGGGGTATTCCATTCAATGGTCCGATGATGTCCCCTTTTGCCATCAAATCTGATACTCTTTTTCAGGCTGGTGAATCCCTTAGCTCTGGAAAAAATGAATGCGGTTGTGAGGAAGCTAATAACGGACTTCCAATGCAGTTTGAAGATTTCTTTGTTCTGTCCTTTGGACGAATTGACATAAGACAGTGTTACCACAATGTCAACATGATATATCCAATAGGCTATAAGTCCTGCTGGCATGATAAGATCACGGGGTCGCTATTTACGTGTGAAGTATTGGATGGCAGTTCTGGGCCTGTTTTCAAGGTTACAAGGTCACCATGCTCGAAATCATTTATTCCAATTGGATCAACTGTATTTTCCTGCCCAAAAATCGATGAAATGGTGGAACAGAACCTTGACAAACGAGGTGATCGTAGAGACAGTACTCTAGAGCATGATGATGACACTGTTGAGATTCTTCTTTCAGATCCCTCCCCACCTCTTGGAGATGATATATTGTCTTGTTTACGAGAGAAAAATATCTCCAATACACTCAATTGTCTGCGCTCTGAAAAGCATGGGGTTGAAGTTGGCGATATTGTTGTGGAAGAAGAGTCATTGTCTGTTGCATGGAAAAAGGTGTCTCAAAAGCTTGTTGATGGGTGTTCCAGTGTCCTGAAGCAGAAGGGCTCCATGAACTTCCTTTGCAAGCATGTTGACAGAGAAACAAGGGAAATTAACCGGGATATGATAAATGAGGAAGACAATGTAATTTTATCTTTGTCAAGATTTTGCTGTTCTTTGGCTCCTCGTATTGCTACATGTGGTGAAAAGGATAAAAGCAAGATTGAACCTCTAGTTGATGCTTTGTCAAGGTGGCTGGATCAAAGCAGATTTGGACTAGATGTAGATTTTGTACAGGAAATTATTGAACGTATGCCTGGTGCCGAATCATGTTCCAATTATAGACCTCTGAAGAGTAGAAGTTCTTCTTCTGTAACTGTAGCAGAAGGAGCGCTAGTTGTCAAACCAAAAGGTGGGGATAATGTCAAGGATGAAATATTCGGTGAGATTTCTCGGAAAGCCAAGAGGCGTAAACTAATTGGTGGTCATGGTGTCAGCAATCCACACCCTCCTCCCGGGAGGCCTATGTGTTTGAGGCTTCCTCCTGGGCTTGTTGGTGACTTCCTTCAGATATCTGAAGTGTTCTGGCGTTTCCGTGAAATATTGGGTTTGGAAGAGGCTTTCTCACCTGAGAAGCTTGAACAGGAGCTTATCAATCCAGTGTTCGATGGTTGGTTTCTTGATAAATCTGGGAAAGAAGTTAACAGAAGTGAGATGAACATTAGCGATAAGGATTATACAGCTACTAAAAATTTTTCTTTGTTCGATGAACCTCGCCAACCTTTTTCTTCGGAAAATACCTCTGCTTCTGTACTAAAAGGGACAAAATCAGGGGATTCTACTGAGTTTAACATCTCATATTCCTCTCGTGGGCTGTGCTTGGGTGCACTTCTAACAACGACTCACATTTCGCTTCTGCAAGTGCTAATATGTGAGCTGCAATCCAAGGTAGCTGCATTTGTTGATCCAAACTTTGATTCTGGAGAATCGAGATCCAGACGAGGACGGAAAAAGGATGACAGTACACTTTCTGCTAAAAGAAATAAGCTGCATATGCTTCCTGTTAACGAGTTCACTTGGCCTGAATTGGCCCGTACGTACATCTTGTCTCTTTTATCAATGGATGGGAACCTTGAATCAGCAGAGATTGCTGCCCGTGAAAGTGGTAAGGTATTTCGTTGTTTACAAGGTGATGGTGGTTTGCTTTGCGGTTCACTTACAGGTGTGGCTGGGATGGAAGCCGATTCAATGTTACTTGCAGAGGCTACTAAAAAAATATTTGGGTCTTTGACAAGAGAAAATGGTGTTCTTTCTGTGGAAGATGATGATTCCGATGGCCTTGATGCCACTGAGATAAACACTTGCAATGGTGATGTTCCGGAGTGGACACAGGTTCTGGAACCTGTGAGAAAGCTTCCAACAAATGTTGGAACTAGAATCAGAAAGTGTGTCTATGATGCTTTAGAGAGAAATCCACCAGAGTGGGCAAAGAAGATATTGGAGCATTCCATCAGTAAAGAAGTATATAAAGGCAATGCTTCAGGACCGACAAAGAAAGCTGTCCTCTCATTGCTAGCGGATGTTCGAGGTGGAGATTTGGTGCAGAGGTCTGTTAAAGGAACCAAAAAGAAGAAGTCTATTGGTGTATCTGATGAATGTCGTGCTGTGTTGCGTGATGTTGCAGCTGCAGATGAGGATAAAGTATTTTGCACTTTGCTGGGCCGAAAGTTGCTGAACTCCAGTGACAATGATGATGACGGACTCCTGGGATCACCTGCAATGGTTTCGCGTCCCTTAGACTTCAGAACGATTGATTTGAGGTTGGCTGAGTTCACATTGGCTGATTTGACTCATATGCCCGGTATGAGGTATATAATGAATGAAGCCGGTTTGAGCGGCATGATTACCTCTCGGGAGAATGTTAACCGGTGGTGGGATGAGATGACGGCCAGACCGGCTAGGAAAAAACTCATGGAAATGGCTGCTTATTAA
Protein Sequence
- >EUTSA_v10022520mg
MELTDSTNEQLGETRSVGLKEDNRSFLGIDLNEIPTGATLGGGCTGAQGDDGEYEPVEVVRSIHDNPDPAPGAPAEVPGPDRDAACGACGRPESIELVVVCDACERGFHLCCVNDGVEPAPSADWMCSDCATGGERSKLWPLGVKSKLILDMNASPPSDAEGYGGEETSDSRKHMLASSSCMGNSYDYAMTHSSFLKPGRGHASPEASGIMARNTKMSVDGLDSHTLGFGFPFSLSNSNSPVRFPSLDPSELLLQNLRHFISERHGLLEDGWRVEFKQPLNGYHLCAVYCAPNGKTFSSIQDVACYLGLAMNERLQHMPKRRKTSRWPNNGFTEQKGSSVSAQLRGIPFNGPMMSPFAIKSDTLFQAGESLSSGKNECGCEEANNGLPMQFEDFFVLSFGRIDIRQCYHNVNMIYPIGYKSCWHDKITGSLFTCEVLDGSSGPVFKVTRSPCSKSFIPIGSTVFSCPKIDEMVEQNLDKRGDRRDSTLEHDDDTVEILLSDPSPPLGDDILSCLREKNISNTLNCLRSEKHGVEVGDIVVEEESLSVAWKKVSQKLVDGCSSVLKQKGSMNFLCKHVDRETREINRDMINEEDNVILSLSRFCCSLAPRIATCGEKDKSKIEPLVDALSRWLDQSRFGLDVDFVQEIIERMPGAESCSNYRPLKSRSSSSVTVAEGALVVKPKGGDNVKDEIFGEISRKAKRRKLIGGHGVSNPHPPPGRPMCLRLPPGLVGDFLQISEVFWRFREILGLEEAFSPEKLEQELINPVFDGWFLDKSGKEVNRSEMNISDKDYTATKNFSLFDEPRQPFSSENTSASVLKGTKSGDSTEFNISYSSRGLCLGALLTTTHISLLQVLICELQSKVAAFVDPNFDSGESRSRRGRKKDDSTLSAKRNKLHMLPVNEFTWPELARTYILSLLSMDGNLESAEIAARESGKVFRCLQGDGGLLCGSLTGVAGMEADSMLLAEATKKIFGSLTRENGVLSVEDDDSDGLDATEINTCNGDVPEWTQVLEPVRKLPTNVGTRIRKCVYDALERNPPEWAKKILEHSISKEVYKGNASGPTKKAVLSLLADVRGGDLVQRSVKGTKKKKSIGVSDECRAVLRDVAAADEDKVFCTLLGRKLLNSSDNDDDGLLGSPAMVSRPLDFRTIDLRLAEFTLADLTHMPGMRYIMNEAGLSGMITSRENVNRWWDEMTARPARKKLMEMAAY