Information report for EUTSA_v10006622mg
Gene Details
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Functional Annotation
- Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.
Homologous
- Beta vulgaris: BVRB_9g219140
- Brassica napus: BnaA06G0106100ZS, BnaA09G0625600ZS, BnaC05G0131200ZS, BnaC08G0483000ZS
- Brassica oleracea: Bo5g021180, Bo8g105910
- Brassica rapa: Bra026751, Bra026112
- Citrullus lanatus: Cla97C07G139070
- Cucumis melo: MELO3C017848
- Cucumis sativus: CsGy4G001800
- Gossypium hirsutum: Gohir.D05G122800, Gohir.A05G121900
- Juglans regia: Jr12_20240, Jr12_20250
- Manihot esculenta: MANES_04G108600
- Prunus persica: PRUPE_3G093100
- Rosa chinensis: RchiOBHm_Chr2g0134371
- Sesamum indicum: SIN_1021914
- Vitis vinifera: VIT_09s0002g08370
Gene Resources
- Pfam: PF00400
- UniProt: V4KYX4
- EMBL: KI517683
- AlphaFoldDB: V4KYX4
- KEGG: eus:EUTSA_v10006622mg
- OMA: IKIMANS
- InterPro: IPR001680 , IPR006594 , IPR006595 , IPR011044 , IPR011047 , IPR015943 , IPR019775 , IPR027728 , IPR036322 , IPR048419 , IPR054080 , IPR054532
- PANTHER: PTHR44083 , PTHR44083:SF27
- SUPFAM: SSF50969 , SSF50978 , SSF50998
- PROSITE: PS00678 , PS50082 , PS50294 , PS50896 , PS50897
- Gene3D: 2.130.10.10
- OrthoDB: V4KYX4
- eggNOG: KOG0266
- STRING: 72664.V4KYX4
Sequences
CDS Sequence
- >EUTSA_v10006622mg
ATGTCTTCTCTAAGTAGAGAGCTCGTGTTCTTGATCTTACAGTTTCTCGATGAGGAGAAGTTTAAAGAGACTGTTCACAAGCTTGAGCAAGAATCTGGGTTTTTCTTCAATATGAAGTATTTTGAGGATGAGGTGCATAATGGAAACTGGGATGAGGTTGAGAAGTATCTCTCTGGTTTCACAAAAGTAGATGATAATAGATACTCAATGAAGATATTCTTCGAGATAAGAAAGCAGAAATATCTCGAGGCTTTGGATAAGCATGATCGTCCCAAGGCCGTGGATATACTAGTGAAGGATTTGAAAGTGTTTTCAACTTTTAACGAGGAGCTTTTTAAAGAAATAACGCAGCTCTTGACGTTAGAGAACTTCCGGGAGAATGAACAGTTATCCAAGTATGGGGACACCAAGTCTGCAAGAGCTATCATGTTGGTGGAGCTCAAAAAGCTTATTGAGGCGAATCCGTTGTTCCGTGATAAACTGCAGTTTCCTACTCTTAGAAATTCAAGGCTTCGCACTTTGATCAACCAGAGCTTAAATTGGCAACATCAGCTTTGTAAAAATCCAAGGCCAAATCCGGATATAAAGACTCTTTTTGTGGATCATTCGTGTGGCCCTCCAAATGGTGCACGGGCTTCATCGCCTGTGAACAATCCTCTGCTTGGAGGATTACCAAAAGCTGGAGGCTTTCCTCCTTTAGGCGCCCACGGGCCATTTCAACCAACGGCCTCACCCGTTCCAACGCCTCTTGCTGGTTGGATGTCTAGTCCATCCTCTGTCCCACATCCTGCTGTGTCTGCAGGAGCCATTGCTCTTGGTGGTCCATCGATCCCAGCGGCATTGAAGCACCCGAGAACTCCTCCAACTAATGCTGGTTTAGACTACCCGTCAGCGGATTCTGAGCATGTCTCAAAAAGAACAAGGCCTATGGGAATCTCAGACGAGGTGAATCTAGGTGTGAACATGTTGCCAATGTCATTTCCAGGGCAGGCCGCCCATGGGCACAGTCCGGCTTTCAAAGCACCAGATGACTTGCCCAAGACAGTTGCACGAACTTTGACTCAGGGCTCATCTCCCATGAGCATGGATTTCCATCCAATTAAACAGACTCTGCTTCTAGTTGGTACAAATGTAGGGGATATCGGGCTGTGGGAAGTTGGATCTCGGGAAAGATTAGTGCAGAAGACCTTCAAAGTCTGGGATTTGAGTAAATGTTCAATGCCCTTACAGGCTGCTCTGGTGAAAGAACCTGTTGTTTCTGTCAACCGTGTGATATGGAGCCCTGACGGTTCCTTGTTTGGAGTTGCTTACTCGAGACATATAGTACAACTATACTCTTATCATGGAGGTGAAGACATGAGGCAACACCTTGAGATTGATGCTCATGTTGGTGGTGTGAATGATATTTCCTTCTCGACTCCAAACAAGCAACTATGTGTAATAACCTGTGGAGATGACAAAACCATCAAGGTGTGGGACGCTGCAACGGGTGTCAAAAGACATACCTTTGAAGGCCATGAAGCTCCTGTTTACTCTGTCTGTCCTCACTACAAGGAAAATATTCAGTTCATATTCTCGACAGCTCTCGATGGGAAAATAAAGGCATGGTTGTATGATAATATGGGTTCTCGAGTTGACTATGATGCACCTGGTCGCTGGTGTACAACAATGGCTTATAGTGCTGATGGAACTAGGTTATTCTCTTGTGGGACTAGTAAAGATGGAGAGTCATACATAGTTGAGTGGAATGAAAGTGAAGGAGCTGTGAAAAGAACTTATCAAGGATTCCACAAGCGTTCTCTCGGTGTTGTGCAGTTTGATACCACTAAAAACCGTTATTTAGCTGCGGGTGATGACTTTTCCATTAAGTTCTGGGATATGGACACTGTACAGCTTTTAACTGCCATTGATGGCGATGGAGGCCTCCAGGCAAGCCCGCGTATCCGGTTTAACAAAGAAGGCTCTCTCTTGGCTGTTTCTGGAAACGAGAATGTGATCAAGGTTATGGCAAACTCAGATGGTCTAAGACTATTGCACACTTTTGAGAACATTTCATCTGAAACCTCCAAGCCTGCGATAAACAGCATTGCAGCGGCAGCAGCAGCAGCTGCTACGAGTGCTGGACTTGCAGATCGATCAGCCAATGTAGTTTCCATGCAAGGAATGAATGGAGATTCGCGGAATATGGTGGATGTGAAGCCAGTGATTACAGAAGAATCAAATGATAAGTCTAAGATATGGAAGCTTACTGAAGTCAGCGAGCCTTCTCAATGCAGGTCACTGAGACTCCCTGAGAATTTGAGAGTTGCTAAGATATCAAGATTGATTTTCACGAATTCAGGAAACGCTATCTTGGCTTTGGCATCAAACGCTATTCATCTTCTATGGAAATGGCAGCGGAATGACCGCAACACAACTGGAAAGGCGACAGCTTCTTTACCGCCTCAGCAATGGCAACCAGCAAGTGGGATCCTCATGACTAACGACGCTGCTGAAACCAATCCCGAGGAAGCTGTACCTTGTTTTGCTTTATCCAAGAATGATTCTTATGTAATGTCGGCCTCTGGAGGAAAGATCTCCTTATTTAACATGATGACTTTTAAGACGATGGCCACTTTCATGCCACCACCGCCTGCTGCCACTTTTCTTGCTTTTCATCCTCAAGACAACAATATTATTGCTATCGGAATGGATGATAGTACTATTCAGATTTACAACGTCCGTGTTGATGAGGTGAAGAGTAAGCTTAAAGGTCATTCGAAGCGAATTACTGGTCTTGCCTTCTCCAACGTATTAAATGTGCTGGTTTCTTCTGGAGCAGATGCTCAGCTTTGTGTTTGGAACACAGATGGATGGGAGAAGCAGAGAAGCAAGGTTCTGCCACTTCCACAGGGAAGACCAAACGCTGCACCTTCAGATACGCGTGTTCAGTTCCATCAAGATCAAGCGCACTTCCTCGTCGTGCACGAGACGCAGCTCGCTATCTACGAAACAACCAAGCTCGAATGCATGAAACAGTGGCCAGTGAGAGAATCATCAGCTCCGATCACTCATGCCACCTTCTCATGTGATAGCCAATTGGTCTACGCGAGTTTTATGGATGCTACGATTTGTGTATTTAGCTCTGCAAATCTAAGATTGCGTTGCCGGGTCAACCCTTCTGCGTATCTACCAGCTAGTCTCAGCAACTCGAACGTACATCCACTGGTGATTGCGGCACATCCCCAAGAACCAAACATGTTTGCGGTTGGCCTCTCAGACGGAGGAGTTCATATTTTCGAACCGGTTGAGTCGGAAGGTAAATGGGGAGTGGCTCCACCAGCTGAGAACGGGTCAGCAAGCGGTGCAGTGGCCGCACCATCGGTTGGAGCCTCTGCCTCTGATCAGCCACAGAGATAA
Protein Sequence
- >EUTSA_v10006622mg
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGPPNGARASSPVNNPLLGGLPKAGGFPPLGAHGPFQPTASPVPTPLAGWMSSPSSVPHPAVSAGAIALGGPSIPAALKHPRTPPTNAGLDYPSADSEHVSKRTRPMGISDEVNLGVNMLPMSFPGQAAHGHSPAFKAPDDLPKTVARTLTQGSSPMSMDFHPIKQTLLLVGTNVGDIGLWEVGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESYIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKVMANSDGLRLLHTFENISSETSKPAINSIAAAAAAAATSAGLADRSANVVSMQGMNGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPENLRVAKISRLIFTNSGNAILALASNAIHLLWKWQRNDRNTTGKATASLPPQQWQPASGILMTNDAAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPLPQGRPNAAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQWPVRESSAPITHATFSCDSQLVYASFMDATICVFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPVESEGKWGVAPPAENGSASGAVAAPSVGASASDQPQR