Information report for EUTSA_v10005852mg
Gene Details
|
|
Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Brassica napus: BnaC08G0417600ZS, BnaA09G0568100ZS, BnaC04G0258600ZS, BnaA07G0222100ZS, BnaA04G0003900ZS
- Brassica oleracea: Bo8g098290, Bo6g079740, Bo4g098350
- Brassica rapa: Bra007720, Bra003518, Bra014378
- Glycine max: Glyma.02G152800, GmTIR1A
- Gossypium hirsutum: Gohir.D08G080700
- Juglans regia: Jr08_12700
- Manihot esculenta: MANES_05G067800
- Prunus avium: Pav_sc0000848.1_g430.1.mk
- Prunus persica: PRUPE_8G253300
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: V4LV51
- EMBL: KI517455
- AlphaFoldDB: V4LV51
- KEGG: eus:EUTSA_v10005852mg
- OMA: TDDCLEM
- InterPro: IPR001810 , IPR006553 , IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF66
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: V4LV51
- CDD: cd22159
- eggNOG: KOG1947
- STRING: 72664.V4LV51
Sequences
CDS Sequence
- >EUTSA_v10005852mg
ATGCATAAGCGATTGGCCTTGTCGTTTCCAGAAGAAGTACTGGAGCACGTATTCTCGTTTATACAGCAGGACAAGGATAGGAACTCGGTGTCTCTGGTGTGCAAGTCATGGTACGAGATCGAGCGGTGGTGCAGGAGGAAAGTGTTCATCGGGAACTGTTACGCGGTGAGCCCGGCGACGGTGATCAGGAGGTTCCCGAAAGTGAGATCCGTGGAGCTCAAGGGCAAACCTCACTTCGCCGACTTCAATTTGGTGCCTGATGGATGGGGAGGCTACGTGTATCCTTGGATTGAGGCCATGTCTTCGTCGTACGCGTGGCTGGAGGAGATAAGGCTGAAGCGGATGGTGGTGAGCGACGAGTGCTTGGAGCTCATAGCTAAGTCCTTTAAGAATTTCAAGGTTCTCGTGCTTTCTTCCTGCGATGGCTTCTCCACTGATGGCCTCGCTGCTATCGCTTCCACTTGCAGAAATCTGAAAGAGCTTGATCTGCGTGAGAGTGATGTTGATGATGTTAGCGGACACTGGCTTAGTCATTTCCCAGATACATACACATCTTTGGTATCACTCAATATCTCTTGCTTAACCTCTGAGGTCAGTTTCTCTGCGCTGGAAAGGTTGGTGAGTAGGTGTCCCAGTCTCAAGTCTCTCAAGCTTAACCGAGCTGTTCCTCTTGAAAAGTTGGCTACTTTACTTCAAAGAGCACCTCAATTGGAAGAATTGGGCACCGGTGGTTACACTGCTGAAGTCCGTCCAGATGTCTTCTCTGGTTTATCACTAGCTCTCTCTGGCTGCAAGAAGCTCAATTGCTTATCTGGCTTTTGGGATGCCGTTCCTGCCTATCTACCAGCCGTTTATTCGCTTTGCAGCCGCCTCACAACTCTGAACCTGAGTTATGCGACTGTCCAGAGCTATGATCTTGTCAAGCTTCTTAGTCAATGCCCTAAATTGCAGCGCCTCTGGGTGCTGGACTACATTGAGGATGCTGGTCTTGAGGTGCTTGCTTCAACCTGCAAGGACCTTCGCGAGTTGAGAGTGTTTCCGTCTGAGCCTTTTGTCATGGAGCCAAACGTTGCATTGACAGAACAAGGGCTTGTCTCCGTCTCCGTAGGCTGTCCAAAACTTGAGTCGGTTCTCTACTTCTGCCGTCAAATGACCAATGCTGCGTTGGTGACCATTGCTAGGAACCGTCCGAACATGACTCGGTTCCGTTTGTGCATCATTGAGCCAAAAGCCCCCGATTATCTGACTCTAGAGCCACTGGATGTGGGATTTGGAGCCATAGTAGAGCACTGCAAAGATCTCCGGCGCCTCTCCCTATCGGGGCTGTTGACGGACAAGGTTTTCGAATACATTGGGACATATGCCAAGAAGATGGAAATGCTCTCGGTGGCGTTTGCAGGAGACAGTGACTTAGGCATGCATCATGTTTTGTCGGGGTGCGATAGCTTGAGGAAACTAGAGATAAGGGACTGCCCATTTGGAGACAAGGCGCTTTTGGCCAATGCTTCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCTTCTTGTTCCGTGAGTTTTGGAGCCTGCAAGTTGCTAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTCATTGATGAACGGGGTCCACCTGACTCGAGACCCGAGAGCTGCCCTGTTGAGAGAGTGTTCATATACCGATCCGTGGCTGGTCCTCGGTTTGACATGCCTGGCTTCGTCTGGAACATGGACCAACACTCAACCATGAGGTTTTCCAGGCAAATCATCACTACTAACGGATTATAA
Protein Sequence
- >EUTSA_v10005852mg
MHKRLALSFPEEVLEHVFSFIQQDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYAWLEEIRLKRMVVSDECLELIAKSFKNFKVLVLSSCDGFSTDGLAAIASTCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLTSEVSFSALERLVSRCPSLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVFSGLSLALSGCKKLNCLSGFWDAVPAYLPAVYSLCSRLTTLNLSYATVQSYDLVKLLSQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSVGCPKLESVLYFCRQMTNAALVTIARNRPNMTRFRLCIIEPKAPDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGPPDSRPESCPVERVFIYRSVAGPRFDMPGFVWNMDQHSTMRFSRQIITTNGL