Information report for EUTSA_v10005740mg
Gene Details
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Functional Annotation
- Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.
Homologous
- Actinidia chinensis: CEY00_Acc13183
- Brassica napus: BnaA09G0527900ZS, BnaC08G0372200ZS, BnaA04G0029700ZS
- Brassica oleracea: Bo8g091720
- Brassica rapa: Bra007318, Bra014632
- Gossypium hirsutum: Gohir.D09G117100, Gohir.A09G121000
- Juglans regia: Jr03_04990, Jr04_18550
- Manihot esculenta: MANES_09G018100
- Populus trichocarpa: POPTR_016G043500v3, POPTR_006G047100v3
- Prunus avium: Pav_sc0000096.1_g280.1.mk
- Prunus persica: PRUPE_7G053300
- Vitis vinifera: VIT_08s0007g09020
Gene Resources
- Pfam: PF13892 PF00271 PF00176
- UniProt: V4LWS5
- RefSeq: XP_006402895.1
- EMBL: KI517455
- KEGG: eus:EUTSA_v10005740mg
- OMA: FWKKNER
- InterPro: IPR000330 , IPR001650 , IPR013087 , IPR014001 , IPR020838 , IPR027417 , IPR038718 , IPR049730 , IPR050520
- PANTHER: PTHR45685 , PTHR45685:SF2
- SUPFAM: SSF52540
- PROSITE: PS50157 , PS51192 , PS51194 , PS51413
- Gene3D: 3.40.50.10810 , 3.40.50.300
- CDD: cd18793
- eggNOG: KOG0388
- STRING: 72664.V4LWS5
Sequences
CDS Sequence
- >EUTSA_v10005740mg
ATGGATCCTTCAAAGAGACAACCCAAGGACTCGCGTTACGCAAATCTATTCGATCTCGAGCCGTTGATGAACTTCCGAATTCCGAAACCTGATGATGAGTTAGATTATTATGGGAGTAGTAGCCAAGATGAAACTAGAAGCAATCAAGGTCGGGTAGTGGCAAACTACGGCAATGGCCTTAAACCGGGAATGAATCATAGCACCAAGAAGAGAAAGCGGTGGACAGAAGATGATGATGATGATGCAGAGGATGATGATGACCTCTACAATCAACATGTTACTGAGGAACACTACCGATCAATGCTTGGGGAGCATATTCAAAAATTCAAAAATAAGTCCAAGGAGTCTCGAGCGAATCACACACACCTTATGGGTGTTCCGGTGCCAAAGAGCAATGTAGGCAATTACAGAGGTAGGAAACTAGGGAACGGTCACCATGGGAGATTCTATGACATGGACACCTCGTCAAATTTTGCATCTGATGCGATCCCACCAAGGCGAGGAAACCATCGTGATTCAGACATTACCCCCAAAATAGCATATGAACCTTCGTATTTGGATATCGGTGATGGTGTTATCTACAAAATCCCCCCAAGTTATGACAAGCTAGTGGCATCATTAAAGTTACCAAGCTTTTCTGATATTCATGTAGAAGATTTTTACTTGAAAGGAACTCTGGATCTGAGATCATTAGCAGAACTGATGGCTAGCGATAAAAGGTCTGGAGCAAGGAGCCGTAATGGAATGGGTGACCCACGACCTCAATATGACTCTCTTCAAGCTAGAGTGAAGGCCCTGTCAGCGTCAAATTCCACCCCAAACTTCAGCCTGAAGGTGTCAGAAGCTGCAATGAATTCTGTCATTCCAGAAGGAGCTGCTGGAAGTACTGCACGGACAATTCTATCAGACGGTGGTGTTTTTCAGGTCCATTACGTGAAGGTTCTGGAGAAGGGAGATACATATGAGATCGTTAGACGAAGTCTACCAAAGAAGCTGAAGGTGAAGAATGATCCTGCAGTCATTGAGAAGACAGAAAGGGACAAAATTAGAAAAGCCTGGATCAACATTGTTAGGAGAGATATACCAAAACACCATAGGAATTTCACCACGTTTCATCGAAAACAATCTATTGATGCCAAGAGGTTTGCAGATGGTTGCCAAAGAGAGGCAGAAGAGAGGAAAAAACAGGAAAAGGAAGCTGCAGAGGCATTAAAACGTGAACAAGAGCTCCGAGAGGCAAAAAGGCAGCAACAGAGGCTCAATTTTCTTATTAAACAGACTGAGCTGTACAGTCACTTTATGCGAGACAAGGCTGATTCAAAGCCTTCTGAAGCCTTCTCGATAGGAGATGAAAATCCGGTTGACGAAGAGCACCCAGAACCTTCAGCGTCAGGACCTTCTGAGGTCGAGGATCCTGAAGATGCTGAAATGAAGGAAAAGGTCCTGAGAGCTGCCCAAGATGCAGTGTCTAAGCAGAAAAAAATAACAGATGCATTTGACACTGAATATATAAAGCTACGGCAAACTTCTGACGTGGAAGGACCATCAAATGATGTCTCAGTCTGTGGCTCCGGCAATATAGACTTGCATAACCCAATATCAAGCCAATTAAAACTCTCTACTTTCAGATCTACAATGCCTGTTACATCGACAGTTCAGACTCCAGAGTTGTTTAAAGGAACCCTTAAAGAATACCAAATGAAAGGCCTTCAGTGGCTCGTCAATTGTTATGAGCAGGGTTTGAATGGCATTCTTGCTGATGAAATGGGCTTGGGTAAGACTATTCAAGCTATGGCGTTCTTGGCACATTTGGCTGAGGAAAAAAACATTTGGGGTCCATTTCTGGTTGTTGCCCCTGCTTCTGTTCTTAACAATTGGGCTGATGAAATTAGTCGTTTCTGTCCTGACTTGAAAACTCTTCCATATTGGGGAGGATTACAAGAGCGGACGATTTTAAGAAAGAATATCAATCCCAAGCGTATGTACCGAAGTATAAGATGGAAGACCCTTCTTAGTTTCAACTGTCGGAACCGATTGCTTCTGACTGGTACTCCAATTCAGAATAACATGGCAGAGTTATGGGCCCTGCTGCACTTCATTATGCCAATGTTGTTTGACAGCCATGATCAATTTAATGAGTGGTTCTCAAAAGGAATCGAGAATCATGCTGAACATGGAGGCACTTTAAATGAGCACCAGCTTAGCAGACTGCATGCAATATTAAAGCCATTCATGCTCCGGCGTGTCAAAAAGGATGTGGTTTCTGAGCTAACTACAAAGACAGAAGTTACAGTACACTGCAAGCTCAGTTCTCGACAACAAGCTTTTTATCAGGCTATTAAGAACAAAATTTCTCTGGCTGAGTTGTTTGATAGCAACCGTGGGCATCTAAATGAAAAGAAAGTTTTGAATTTAATGAATATCGTCATTCAGCTTCGGAAGGTTTGCAACCATCCAGAGTTGTTCGAGAGGAATGAAGGGAGCTCGTATCTATACTTTGGAGTGATGTCCAATTCTCTTTTGCCCCCTCCCTTTGGTGAGCTCGAAGATGTACATTATTCGGGTGGTCAAAATCCCATAACATACAAGATACCTAAACTCCTACAGAGAGAGGTTCTCCAAAATTCTGAAACATTTTGCTCTTCTATCGGGCGGGGCATATCAAGAGAATCCTTTCTGAAGAATTTTAATATATATTCACCTGAGTATATTCTTAGGTCAATATTCCCATCTGAGAGTAGGATAAATCAAGCGGTTAGTGGAAGTGGAGCATTTGGCTTTTCGCGCTTGATGGATTTATCACCATCAGAATTTGGATATCTGGCTTTGTGTTCCGTCATGGAAAGGCTATTATTCTCTATGCTGAAATGGGAGCGGCAATTCTTGGATGAAATATTAGAATCTTCTATGGAATCCATGGATGATGATCTTAGTGGAGATAACATCAAAAGAGTTAGAACCAGAGCTGTCACAAGAATGTTGTTGATGCCATCAAAAGTTGAAATGAGTTTGCTGAAAGGGAGACTAGGCACTGGGCCAATCCGTGACTCATTTGAATCTCTAGTGATCTCACATCAGGATAGGCTTCTTTCAAATATCAAACTCCTACATTCTGCATATACTTTTATCCCAAAAGCCAGAGCTCCACCGGTAAGCGTCCATTGCTCGGACAGAAATTCTGCATACAGAACTACAGAAGAATTACATCAACCATGGCTTAAGAGACTATTAATTGGTTTTGCACGAACGTCAGAAGCTAATGGACCTAGGAAGCCGAACAGCCTTCCACATCCTCTAATCCAAGAAATTGATTCAGAACTTCCAGTTGTGCAACCTGCTCTTCAACTGACGCACAGAATATTTGGTTCTTGCCCACCAATGCAAAGTTTTGACCCAGCAAAGTTGCTCACGGACTCTGGGAAGCTGCAGACACTTGATATATTATTGAAGCGGCTTCGTGCTGGAAATCACAGGGTGCTCCTGTTTGCACAAATGACAAAGATGCTGAATATTCTCGAGGACTACATGAACTATAGAAAGTACAAGTACCTCAGGCTTGATGGATCCTCCACCATCATGGATCGCCGAGATATGGTTAGGGATTTTCAGCATAGGAGCGATATTTTTGTCTTCTTGTTGAGCACCAGAGCTGGAGGACTTGGAATCAACTTGACGGCTGCAGACACTGTCATTTTCTATGAAAGTGATTGGAATCCCACCTTGGATTTACAAGCTATGGACAGAGCTCATCGTCTGGGCCAGACAAAAGATGTTACTGTTTATCGGCTCATCTGCAAGGAAACGGTGGAAGAGAAAATTTTGCACAGGGCAAGTCAGAAAAATACAGTTCAGCAGCTTGTTATGACTGGAGGTCATGTTCAAGGTGATGATGTTTTTGGACCTGCGGATGTGGTATCGTTGCTTATGGATGATGCAGAGGCAGCACAACTGGAGCAGAAATTCAGAGAACTACCATTGCAGGTAAAGGACAGGCAGAAAAAAAAACAGCCAACGAAATGTATAAGAATAGATGCTGAAGGAGATGCGACTTTGGAAGAGTTAGAAGAGGCTGAACGACAGGATAATGGAGAGGAACCTTCCCAAGAACCGGAAAAGACAAAATCCACTAACAAAAAGAGGAAAGCTGCTTCAACTCCGAAACCTAGAGTTTCCCAGAAAGCAAAGGAAGAAGCTAATGGTGAAGGAGATGCTCCTCTTCAGCCTCAAAGAACAAAAAGGGAAAGAATCAGGATTCTTAATGACCTGCAAAACAGGTTAAACATTCCACAGGAGATTCATGACGGATATATGGAGGAGCTTCAAGCTGATAGTCAAATCCAACGTTTAAGGAACTCTTTTCTGCAAACCTCTGAGGATCAGATTGTTGCTGGTGACAGACCCAGCAGAGCGTGTCGAGTCCGGTGGAACAACCCGGAACGGTCTGGAGATATTGATCACCGGAACCTCTCCTGCGTGGGTTGCGGTCAACGCTTTGAGAGACAAAGCAACCTCACGAGTCATCTCAAAACCTGTTTAAGGCACACCACCGAAGAAAGTTCAGGCCGATTGCGTCGAGTCCGAAACAAACCGGAACGGTTTCGTGGATATAGATCACCGGACTCTATCATGCGTACGATGCGGTCAACTTTTCGAGTCACAATGCAACTTAACACGTCATGA
Protein Sequence
- >EUTSA_v10005740mg
MDPSKRQPKDSRYANLFDLEPLMNFRIPKPDDELDYYGSSSQDETRSNQGRVVANYGNGLKPGMNHSTKKRKRWTEDDDDDAEDDDDLYNQHVTEEHYRSMLGEHIQKFKNKSKESRANHTHLMGVPVPKSNVGNYRGRKLGNGHHGRFYDMDTSSNFASDAIPPRRGNHRDSDITPKIAYEPSYLDIGDGVIYKIPPSYDKLVASLKLPSFSDIHVEDFYLKGTLDLRSLAELMASDKRSGARSRNGMGDPRPQYDSLQARVKALSASNSTPNFSLKVSEAAMNSVIPEGAAGSTARTILSDGGVFQVHYVKVLEKGDTYEIVRRSLPKKLKVKNDPAVIEKTERDKIRKAWINIVRRDIPKHHRNFTTFHRKQSIDAKRFADGCQREAEERKKQEKEAAEALKREQELREAKRQQQRLNFLIKQTELYSHFMRDKADSKPSEAFSIGDENPVDEEHPEPSASGPSEVEDPEDAEMKEKVLRAAQDAVSKQKKITDAFDTEYIKLRQTSDVEGPSNDVSVCGSGNIDLHNPISSQLKLSTFRSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDSHDQFNEWFSKGIENHAEHGGTLNEHQLSRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHLNEKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVMSNSLLPPPFGELEDVHYSGGQNPITYKIPKLLQREVLQNSETFCSSIGRGISRESFLKNFNIYSPEYILRSIFPSESRINQAVSGSGAFGFSRLMDLSPSEFGYLALCSVMERLLFSMLKWERQFLDEILESSMESMDDDLSGDNIKRVRTRAVTRMLLMPSKVEMSLLKGRLGTGPIRDSFESLVISHQDRLLSNIKLLHSAYTFIPKARAPPVSVHCSDRNSAYRTTEELHQPWLKRLLIGFARTSEANGPRKPNSLPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDVFGPADVVSLLMDDAEAAQLEQKFRELPLQVKDRQKKKQPTKCIRIDAEGDATLEELEEAERQDNGEEPSQEPEKTKSTNKKRKAASTPKPRVSQKAKEEANGEGDAPLQPQRTKRERIRILNDLQNRLNIPQEIHDGYMEELQADSQIQRLRNSFLQTSEDQIVAGDRPSRACRVRWNNPERSGDIDHRNLSCVGCGQRFERQSNLTSHLKTCLRHTTEESSGRLRRVRNKPERFRGYRSPDSIMRTMRSTFRVTMQLNTS