Information report for EUTSA_v10001280mg
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Brassica napus: BnaA03G0222900ZS, BnaC03G0262000ZS, BnaA04G0290800ZS, BnaC04G0609100ZS
- Brassica oleracea: Bo3g039060, Bo4g196000
- Brassica rapa: Bra000409, Bra039296
- Gossypium hirsutum: Gohir.A11G090000, Gohir.D11G094400, Gohir.D12G111700, Gohir.A12G108600
- Manihot esculenta: MANES_01G255300
- Prunus avium: Pav_sc0000254.1_g1560.1.mk
- Prunus persica: PRUPE_2G172900
- Vitis vinifera: VIT_15s0046g02290
Gene Resources
- Pfam: PF00271 PF00176
- UniProt: V4L6G1
- EMBL: KI517481
- KEGG: eus:EUTSA_v10001280mg
- OMA: HNQAPKW
- InterPro: IPR000330 , IPR001487 , IPR001650 , IPR014001 , IPR014978 , IPR027417 , IPR036427 , IPR038718 , IPR049730
- PANTHER: PTHR10799
- SUPFAM: SSF47370 , SSF52540
- PROSITE: PS51192 , PS51194 , PS51666
- Gene3D: 1.20.5.170 , 1.20.920.10 , 3.40.50.10810 , 3.40.50.300
- OrthoDB: V4L6G1
- CDD: cd17996 , cd18793
- eggNOG: KOG0386
- STRING: 72664.V4L6G1
Sequences
CDS Sequence
- >EUTSA_v10001280mg
ATGCAATCTGGAGGCAGTGGCGGAGGGCCCGCCCGTAATCCGGGCATGGGTCCAGCTGGTCGGACCGCGTCCACGTCATCCGCTGCGTCTCCGTCTTCTTCATCTTCATCTGTGCAACAGCAGCAGCAGCAGCAGCAGCTGGCGTCTAGGCAGCAGCAGAGAAACTCAGAGGCAAATGATAGCATGTTTGCGTATCATGCTGGTGGGGTTCAGGGAATGATGGCAGGTGGCAACTTTGCTTCTTCGTCTCCGGGCTCTATGCAACAGCCTCAACAGTCTAGGAAATTCTTTGAGTCTCCTCAACAACAACAGGGTTCTTCCCAAGAGGGCCAGCAAAGTTTTAATCCAATGCAGCAAGCGTATATTCAGTTTGCTTTACAGGCACAGCAACAAAAAGCACAGCAGCAAGCTAGAATGGGAATGTTGAATATGCAAGACATGATTCCGATGCAGGCATCTGCACAGCCCCAGGCCTCATCGTCTAAGCCATCGGGTGAACAGTTTGCTCGCGGTGAGAGGCAGGTGGAATCAGGTCCTCAACAAAGGAACGAATCAAAACCTCTTCCTCAGCAGGTGGGAACAGGACAACTAATGCCAGGAAATATCACAAGGCCGATGCAGGCACCACAGGCTCCGCAGGGTATCAACAACATGGGAACCAACCAACTCGCATTTGCACAGCAGTGGCAGGCGATGCAGGCATGGGCGCGTGAGCGTAATATTGATCTCTCACATCCTGCCAACGCCAGCCAAATGGCGCACATCCTTCAGGCAAGAATGGCTGCCCAACAGAAAGCTAATGAAGGCAATGTAGCTTCACAGTCACCATCAATTCCAATCTCTAGCCAGCCGGCCTCATCTTCAGTTGTTCCAGGTGATAATTCACCTCGTACCAACTCTGCTAGTGATATCTCTGGGCACTCGGGATCAGCGAAGGCCAGACATGCAATATGTACCAGCTCATTAGCCTCGACTTCCAGTCCTAGAATTGTGAACCCTGTAGCGAATCCCTTCTCCATCCAAGGGAGAGATAATCCAGTGTATCCTCGACATTTAGTTCAGTCTACCAATGGGATGCCCTCAGGAAATTCCATGCAGACGTCTGCAAATGAGACACATGTTTTGGATCAAAATGCGTCTACAAAAAAAAGTTTAGGTTCTGCTGAACATTTGCAAATGCAGCAGCCTAGGCAACTGAATGCACCGACGCCCAATTTAGCAGCTCCGTCTGATGCTGGTCCACTCAGTAACTCGTCCCTTCAGAGTGGACAGGGGACCCAACAAGCACAGCAGCGATCAGGATTCACTAAACAACAACTCCATGTTCTCAAAGCCCAGATACTGGCATTTAGGCGTTTGAAGAAAGGAGAAAGTTCGTTGCCTCAGGAGCTGCTTCACGCTATTGCTCCACCACCGCTTGAACTGCAGATGCAGAGGCACATTTCTCCTGTTGGAGTACAAGTTCAGGATAGATCTTCAGACAAAACTGTAGAAGACCAAGCGAGGTCGCTGGAGTGTGGCCAAGAGTCTCAGGCTGCTGCTTCTTCAAATGGCCAGCTTTTTTCTAAAGACGAAGATAATGTTGGAGATACCGAAGTAGCTTTGGCGACGGGTCACAGTCATTTATTTCAAAACCTGGGAAAAGAAGCTGCTTCTACTGATCCGGTTACGAAAGAGGAGCAACATACTGATGTACTCCCTGTTAAGTCAGACCAAGGAGCAGATGCTAGTAGTCAACAGACTCCTAGAAGTGATTCTAATGTTGATAAGGGAAAAGCTGTTGCATCTGATGGAGGCCAATCTAATGTTCCTCCGCAAGCAAACTCTCCCCAGCAGCCCAAGGATACAGCCTCTGCCAGGAAATATCATGGACCGTTGTTTGATTTTCCCTTTTTCACTCGAAAGCATGACTCTTATGGGTCTGCAACAGCCAATGCCAATAACAATCTCACGTTAGCATATGACATCAAAGATCTCATTTGTGAAGAAGGTGCAGAGTTCTTTAATAAGAAACGAACGGACAGTTTGAAGAAGATCAATGGTCTACTGGCAAAAAATTTAGAAAGGAAAAGAATTAGGCCTGATCTTGTTTTGCGCCTTCAAATTGAGGAGAAAAAGCTTAGGCTATCGGATCTTCAGTCTCGTGTTAGGGATGAAGTGGATCGACAACAACAGGAGATAATGTCCATGCCTGATAGACCATACCGTAAGTTTGTGAGGTTGTGCGAACGACAACGCCTTGAGATGAATAGACAAGTACTGGCCAGCCAGAAAGCTGTTAGAGAGAAGCAGCTGAAAACCATTTTTCAGTGGCGTAAGAAACTCCTTGAGGCTCACTGGGCTATACGTGATGCACGCACTGCTCGTAACAGGGGAGTGGCCAAATACCACGAAAAGATGCTGAGAGAGTTCTCGAAGAGAAAAGATGATGGCCGGAACAAAAGAATGGAGGCATTGAAAAATAATGATGTAGAAAGGTACAGAGAGATGTTGCTGGAACAGCAAACAAATATACCCGGTGATGCTGCTGAAAGATACGCTGTTCTCTCCTCATTTTTGACCCAGACCGAAGATTATCTCCATAAACTTGGAGGAAAGATTACTGCCACAAAGAATCAACAGGAAGTGGAGGAGGCAGCAAATGCTGCAGCGGTTGCAGCAAGATTGCAGGGCCTGTCAGAAGAAGAGGTCAGGGCAGCAGCTGCGTGTGCTCGAGAAGAAGTTGTGATCAGAAATAGATTTATGGAAATGAATGCGCCAAAAGATAATTCATCTGTCAACAAGTATTATACGCTGGCTCATGCTGTAAATGAAGTTGTTGTGAGACAACCCTCGATGCTTCAAGCTGGAACTTTGCGTGATTACCAGCTGGTTGGATTGCAATGGATGCTCTCATTGTACAATAACAAATTAAATGGGATTTTGGCTGATGAGATGGGTCTTGGAAAAACTGTGCAGGTAATGGCATTGATTGCTTACCTTATGGAGTTTAAGGGGAACTATGGACCTCATCTCATCATTGTTCCCAATGCTGTTCTGGTGAATTGGAAGAGTGAACTCCATACTTGGTTGCCATCGGTTTCATGCATATATTATGTTGGTACAAAGGATCAACGTTCAAAATTGTTCTCTCAGGAGGTTTGCGCCATGAAGTTCAATGTCCTCGTTACGACTTATGAGTTCATTATGTATGATCGATCAAAACTCTCAAAAGTTGACTGGAAATATATTATAATTGATGAAGCACAACGTATGAAGGACAGAGAATCTGTTTTGGCCCGAGATCTTGATCGGTATCGCTGCCAGAGGAGATTACTTCTCACTGGAACACCTTTACAGAACGATCTGAAAGAGCTTTGGTCACTATTGAATCTCCTCCTTCCTGATGTCTTTGACAATCGAAAAGCATTTCATGATTGGTTCGCGCAACCCTTTCAAAAAGAAGGTCCTGCGCATAATATAGAGGACGACTGGCTGGAGACTGAGAAAAAGGTCATAGTCATTCACAGGCTTCATCAAATTTTGGAGCCGTTCATGCTCAGACGCCGTGTTGAGGATGTGGAAGGTTCACTTCCTCCTAAGGTTTCCGTAGTTTTAAGATGTAGAATGTCTGCTATTCAGAGTGCCGTTTATGATTGGATTAAAGCTACTGGAACTCTTAGAGTGGATCCAGACGATGAAAAACTTAGAGCGCAGAAGAATCCGATTTATCAAGCCAAGATATATAGAACTTTGAATAATAGGTGCATGGAGTTGAGGAAAGCATGCAATCATCCTTTGCTCAATTATCCATATTTCAATGATCTTTCCAAAGATTTTCTCGTAAGGTCATGTGGAAAATTGTGGATTCTAGATAGAATTCTTATAAAGCTACAGAGGACAGGCCATCGTGTATTGCTCTTCAGTACAATGACTAAACTCCTTGATATCTTGGAAGAGTATCTGCAATGGAGGAGACTTGTATACAGAAGAATAGATGGGACTACTAGCCTAGAAGATCGGGAATCAGCTATTGTGGATTTCAATGATCCTGATACTGATTGCTTTATTTTCCTGCTTAGCATACGTGCAGCTGGAAGGGGTCTGAACCTTCAGACTGCTGACACAGTTGTGATATATGATCCGGATCCAAACCCCAAGAATGAGGAACAAGCAGTTGCCAGAGCCCATCGTATTGGGCAGACAAGGGAAGTTAAAGTGATTTATATGGAGGCAGTTGTTGAAAAAATTTCCAGCCATCAAAAAGAGGACGAGCTTAGAAGTGGTGGTTCAATAGATATAGAGGATGACTTGGCTGGGAAGGACCGGTACATAGGATCTATAGAGGGTCTCATAAGGAATAATATTCAACAGTATAAGATCGACATGGCTGATGAAGTCATTAATGCTGGGCGTTTTGACCAAAGGACGACTCATGAAGAGCGACGAATGACATTGGAGACTTTATTACATGATGAAGAGAGATATCAAGAAACCGTCCATGATGTACCTTCTCTTCATGAGGTGAACAGGATGATTGCCAGAAGCGAGGAGGAAGTTGAGTTATTTGATCAGATGGATGAAGAATTTGACTGGACCAAAGAGATGACTTCTCATGAGCAGGTGCCTAAGTGGCTTCGAGCTAGTACCAGAGAGGTGAATTCTGCCGTTGCTGATTTATCTAAGAAACCGTCAAAGAACATGTTGTCAAGCAGTAATCTGATTGTGCAAACTGGTGGCCCTGGAGGTGAGAGGAAAAGGGGGCGACCCAAGAGCAAAAAGATTAACTACAAGGAAATTGAAGATGACAATGGAGGATACTCTGATGAAAGCTCTGAGGAAAGGAATATTGACTCTGGGAATGAAGAAGAGGGAGACATTCGACAATTTGATGATGACGAACTAACGGGTGCTCTTGGTGATCACCAAACCAACAAGGGCGAATCTGATGGAGAGAATCCTGTCTGTGGTTATGATTACCCTCCGGGTTCAGGTAGTTATAAAAAAATTCCTCCACGGGATGATGCTGGTTCGTCAGGATCGTCGCCAGAAAGTCATAGATCGAAAGAAATGGCTTCTCCTGTTTCTTCACAAAAGTTTGGCTCTTTGTCTGCATTGGACACTAGGCCAGGTTCTGTCTCAAAAAGACTGGGGGACGACCTAGAAGAGGGGGAAATAGCAGCATCGGGGGATTCTCACATAGATCTCCAACGATCAGGAAGTTGGGCCCATGACCGTGAGGAAGGGGAAGAAGAACAGGTTTTGCAACCTACAATAAAACGGAAACGGAGTATTCGTCTAAGACCCCGTCAAACAGCAGAAAGATTAGACGGTGGTGATATGCATGCAGCTCAGCCATTGCAAGTCGATCGTAGCTATCGATCAAAGTTGAGGACAGTTGTTGACTCACATGGTTCAAGACTAGATCGGAGTGATTCATCCTCGAGACTTAGGAGTTTACCTGCAAAGAAGGTAGCTAATACGTCTAAGCTGCATGTATCATCCCCAAAATCTGGTAGATTGAATATCACACAGCTTCCCGTGGAGGACAACACTGAAGCTGCCAGAGAAACATGGGATGGAACTAGTCCCATTGGCTCTTCAAATGCAGGTGCAAGAATGTCCCACATCATACAGAAACGGTGCAAAAACGTCATTAGCAAGCTCCAAAGGAGAATTGACAAGGAAGGTCAGCAGATTGTACCTATGCTGACAAATTTGTGGAAGAGAATTCAGAATGGTTATGCAGCTGGAGGTGTAAATAATCTTTTGGAACTACGAGAGATAGATCTCCGGGTGGAAAGGCTAGAGTACGTAGGAGTTATGGAACTCGCATCTGACGTGCAGTTTATGCTAAGGGGAGCAATGCAATTTTATGGATTCTCACACGAGGTGAGATCTGAAGCAAGGAAGGTTCACAATCTGTTCTTTGATCTATTGAAAATGTCTTTTCCAGACACAGATTTCCGGGAAGCAAGGAATGCTCTTTCCTTCTCTGGCCCAACCCCAACTTTGGTATCTACACCGTCTCCAAGAGGAGCAGGTATTAGTCAGGGTAAGAGACAAAAGCCGGTAAATGAGGTGGAATCCGAGCCAAGCTCTCCTCAGAGACCTCAACAACGCGAGAACACAAGGATCAGAGTACAGATACCTCAGAAAGAAGTAAAGATTGGCGGGACATCAAGCCACACCGATGACTCTCCAATATTAGCCCATCCAGGGGAATTAGTAATCTGCAAGAAGAAGAGAAAAGACAGAGAAAAGTCGGCTCCAAGAACCCGAACCGCTGGCTCCAGCAGCCCGGTCTCGCCCCCAGCTATGATAGGTCGTGGGCTTAGAAGTCCTGTGTCTGGTTCATTTACAAGGGAAACAAGGCTAGCTCAACAGCAACGCTGGCCAAACCAAGCCACTCACCCAAACAACAGCGGTGCGGCTGGTGATTCGGTGGGATGGGCTAATCCGGTGAAGAGGTTAAGGACGGATTCTGGTAAGAGAAGGCCGAGCCATTTGTAG
Protein Sequence
- >EUTSA_v10001280mg
MQSGGSGGGPARNPGMGPAGRTASTSSAASPSSSSSSVQQQQQQQQLASRQQQRNSEANDSMFAYHAGGVQGMMAGGNFASSSPGSMQQPQQSRKFFESPQQQQGSSQEGQQSFNPMQQAYIQFALQAQQQKAQQQARMGMLNMQDMIPMQASAQPQASSSKPSGEQFARGERQVESGPQQRNESKPLPQQVGTGQLMPGNITRPMQAPQAPQGINNMGTNQLAFAQQWQAMQAWARERNIDLSHPANASQMAHILQARMAAQQKANEGNVASQSPSIPISSQPASSSVVPGDNSPRTNSASDISGHSGSAKARHAICTSSLASTSSPRIVNPVANPFSIQGRDNPVYPRHLVQSTNGMPSGNSMQTSANETHVLDQNASTKKSLGSAEHLQMQQPRQLNAPTPNLAAPSDAGPLSNSSLQSGQGTQQAQQRSGFTKQQLHVLKAQILAFRRLKKGESSLPQELLHAIAPPPLELQMQRHISPVGVQVQDRSSDKTVEDQARSLECGQESQAAASSNGQLFSKDEDNVGDTEVALATGHSHLFQNLGKEAASTDPVTKEEQHTDVLPVKSDQGADASSQQTPRSDSNVDKGKAVASDGGQSNVPPQANSPQQPKDTASARKYHGPLFDFPFFTRKHDSYGSATANANNNLTLAYDIKDLICEEGAEFFNKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEKKLRLSDLQSRVRDEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLASQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNIPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAVAARLQGLSEEEVRAAAACAREEVVIRNRFMEMNAPKDNSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDLSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKISSHQKEDELRSGGSIDIEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEFDWTKEMTSHEQVPKWLRASTREVNSAVADLSKKPSKNMLSSSNLIVQTGGPGGERKRGRPKSKKINYKEIEDDNGGYSDESSEERNIDSGNEEEGDIRQFDDDELTGALGDHQTNKGESDGENPVCGYDYPPGSGSYKKIPPRDDAGSSGSSPESHRSKEMASPVSSQKFGSLSALDTRPGSVSKRLGDDLEEGEIAASGDSHIDLQRSGSWAHDREEGEEEQVLQPTIKRKRSIRLRPRQTAERLDGGDMHAAQPLQVDRSYRSKLRTVVDSHGSRLDRSDSSSRLRSLPAKKVANTSKLHVSSPKSGRLNITQLPVEDNTEAARETWDGTSPIGSSNAGARMSHIIQKRCKNVISKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVNNLLELREIDLRVERLEYVGVMELASDVQFMLRGAMQFYGFSHEVRSEARKVHNLFFDLLKMSFPDTDFREARNALSFSGPTPTLVSTPSPRGAGISQGKRQKPVNEVESEPSSPQRPQQRENTRIRVQIPQKEVKIGGTSSHTDDSPILAHPGELVICKKKRKDREKSAPRTRTAGSSSPVSPPAMIGRGLRSPVSGSFTRETRLAQQQRWPNQATHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSHL