Information report for Eucgr.F04480
Gene Details
|
|
Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Citrullus lanatus: Cla97C09G184470
- Glycine max: Glyma.08G162300, Glyma.15G265300
- Gossypium hirsutum: Gohir.D01G085300, Gohir.A01G100800
- Juglans regia: Jr06_11960, Jr06_11950, Jr06_11970, Jr15_08850
- Manihot esculenta: MANES_16G052800
- Medicago truncatula: Medtr2g063480
- Populus trichocarpa: POPTR_008G080900v3
- Prunus persica: PRUPE_4G125000
- Rosa chinensis: RchiOBHm_Chr5g0023031
- Vitis vinifera: VIT_19s0085g01090
Gene Resources
- Pfam: PF07926
- UniProt: A0A059BZN9
- RefSeq: XP_010064101.1
- EMBL: KK198758
- KEGG: egr:104451048
- OMA: HAQQNYE
- InterPro: IPR012929
- PANTHER: PTHR18898 , PTHR18898:SF2
- OrthoDB: A0A059BZN9
- eggNOG: KOG4674
- STRING: 71139.A0A059BZN9
Sequences
CDS Sequence
- >Eucgr.F04480
ATGCCGCTGTTCATCTCCGATGACGAGCTGTCGCGGTGCTCCAACGATGGGGCGCTGGTGGCGGAGAAAGCCGACGCCTTCATCCGGAACCTGCAGAGGGAGCTGGAGTCCGTCAGGGCGCAGCAGGACGCGTCCGCCATCACGGCGGAGCAGACGTGCTCCCTCCTGGAGCAGAAGTACCTCTCCCTCTCCTCCGACTTCGCCGACCTCCAGTCCAATTCCCTCCACCTCCAGTCCTCCCTCGATCGCCACCTCTCCGACCTCGCCGACCTCCAGTCCCAGAAGCACCACCTCCACCTCCGATGCATGGAAAAGGATGGCGAGATAGAGAGGCTGGCCACCGAGGTCTCCGAGCTTCACAAGTCGAAGAGGCAGCTCATGGAGTTGGTGGAGCACAAGGGCCTCGAGCTCTCCGAGAAGAACGCCACCATCAAGTCTTACCTCGATAAGATCGTGAGCTTGACAGAGAATGCTTCTCAGAAAGAGGCACGTCTCAGTGAAATTGAAGCGGAATTAACAAGGAGCCAGGCTGCCTGTTCTCGGCTCTCTCAGGAAAAAGAGCTGATCGAGCGACATAATGTGTGGCTTAATGATGAGTTGAAGGCCAAAGTTGACAGTGCCACTGAGTTGCGCAGAGTCCACGCCGATCTCGAATCAGATCTGTCTGCTAAGCTTGCGGATGTAGACAGACAATTAGCCAATTCCTCTTCTTCTTTAAATTGGAACAAGGAAAGAGTGAGGGAGCTAGAAACGAAACTAGTAGCCATGCAAGAGGAGCTATGCTCGACTAAAGATTCTGCAGCAGCCAATGAGGAGCGATTTCAAGCAGAAATCTCTACTGTGAATAGACTTGTTGAATTGTATAAAGAAAGTAGCGAAGAATGGTCCAGAAAGGCTGGCGAGCTTGAGGGTGTTATTAAAGCTTTAGAAACACATTTAACTCAAGTGGAAAATAACAACAAAGAAAAACTCGAAGAGGAGTTATCCACCAGAAGGCAACTAGAGAAGGAAGCTGAAGATCTGAAGGCGAAACTGGAAAAATGTGAAGCTGAAATGGAATCTCTGAGGAAAAATAATGAGTCAAATCTTCTTCCTCTTAGTAGTTTCAGTTTAGAAAGTTGGAAGGGTTCTTCTGATCCTTACGACATGGTTCAGGATGATCGGGCAATTGTCCCTAGGGTACCAATAGGTGTATCAGGGACAGCATTAGCTGCTTCCCTTCTGCGTGATGGTTGGAGTCTTGCAAAGATGTATGCAAAGTACCAAGAGGCAGTTGATGCGATGAGACACGAGCAGATGGGAAGAAAAGAAGCTGAAGCTGTATTACAAAGGGTTTTATATGAAATAGAGGAGAAAGCTGAAGCTATTTTGGATGAAAGAGCTGAACATGAGAGGATGGTTGAGGCATACTCCATGATCAACCAAAGGTTACAGCAGGCCACATCTGAACAGTTGAACCTAGATAGAGCTATTGGGGAGTTAAAGGCTGATCTGAAGAAGCGTGAACGGGAATATGTGCTTGCTCAGCATGAGGTTGTTGACCTTCAAAAGCAGGTTACAGTCCTTTTGAAGGAATGCCGTGATATACAATTACGTTATGGATCCAGTCTGCATAATTATTCTGATGATAAGGGAACTGATGGAGCAGTGGAGATGATTGCTGAATATGACACTGAGAAAGTTATTTCAGATCGGCTTTTGACCTTCAAGGATATAAATGGATTGGTTGAGCAGAATGTTCAGCTTAGAACCCTTGTTCGCAGCCTGTCTGATCAGATAGAGAATAAAGAGTTGGAATTTAAGGACAAGTTAGAAATGGAGCTCAAAAAGCAAACTGAGGAAGCTGCTTCTAAGGTTGCGGCTGTTTTACATAGAGCGGAGGAGCAAACTGTTATGATTGAGTCATTGCACACCTCAGTTTCAATGTACAAAAGGCTATATGAAGAGGAGCAAAAACATAATTCATCCAATGCCCACACCGCTGTTGCAGTTCCAGAAGAGGGAAGGTCGGGCTTCCAGTTGCTTATTGAGGGTTCTCAGGAAGCTGCTAAAAAGGCACAAGAACATGCTGTGGAACGAGTGAGATGTCTTGAAGAAGAGTTGGCAAAGTCTAGGAGCAAGATTATATTATTGCAGTCAGAGCGGGACAAGATGGCCCTGGAAGCAGATTTTACGAGGGAGAAACTTGATAGGCTGATGAATGAATCCGAACACAAGAGAGAGGAAATAAATGGAGTTCTAGCAAGAAATGTGGAGTTTTCTCAGTTGATAGTTGACTACCAGCGGAAGATTCGTGAAAGTTCAGAGTCTTCGCATTCTGCTGAGGAGCTTACTCGGAAGTTGAATATGGAGGTTGCTGTTCTGAAGCAAGAAAAAGACATATTGTCATCTGCTGAAAGGAGGGCTTGTGCTGAAGTTCAGAGTTTGTCAGAAAGACTTTATCGTCTTCAGGCTACATTGGACACCATTCAGAGCACTGAGGAAGTCCGTGAGGAAGCACGGGCTGCGGAGAAGAAAAGGCAGGAGGAATATATCCAGCGTATTCAGAAGGAATGGGCTGAGGCTAAGAAGGAGCTACAAGATGAACATGATAATGTTCGAAAGTTAACGCTTGATCGGGACCAGACTTTAAAAAATTCAATGAAACAAGTTGAAGAGATGGGAAAGGAGTTGGCCAGTGCCTTGCATGCTGTTGCAGGTGCCGAGAGTAGGGCAGCTGTGGCTGAGGCTAAACTATCTGATCTGGAGAAAAGGATCAGATCTTCAGATTCAAAGATATTAGAGGTGGCTAATGCTGGTGGAAGTCTCTCTATTTCAACTAATGAGGTTATTTCAGAACTGCAAATTGCAAAAGAAGAAATAGAGAAACTAAGAGAAGAAGCACAGGCAAACAGGGATCACATGCTACAGTACAAAAGCATAGCACAAGTGAACGAATCAGCATTGAAGCAGATGGAATGCGCTCATGAAAACTTCAAAACAGAGGCAGAGAAATTAAAGCAATCTTTGGAAGCTGAAGTAGTTTCACTAAGAGAGAGGCTTTCTCAAATGGAAACTGAAGTCAACAATAAATCACAGCAAGTGGTTTCTATGAATGTTGAGAAGGAAGAGGCCCTTGCATCTTTGTTAGCAGAAATTACTAGTTTGAAAGAAGGAAACACGCTTAAAGGTTCCATAGTTGACACATTGGAAACAAAGATTTCTCTGTTGGAAGATAAGTGGAAGAGTGAGCATGAGCGCTGGCGTTCTGCTCAGGCTAACTACGAACGACAGGTTATTCTGCAATCTGAGACAATCCAAGAGTTGACAAAAACATCAGAAGCTTTGGCTTCATTGCAACAGGAGACAGATGAATTACGCAGGCTGGCAAATTCCCAGAAAAGTGAGAATGATGAATTGAAGGCCAGGTGGGAAGCCGAGAAGTCAATGCTAGTGGAATCCAAAGCAGAAGCTGAGAAAAAGTACAACGAATTGAATGAACAGAATAAAATACTGCATGATAGACTTGGAGCTCTGCACATTCAACTGGCCGAGAGAGATCGTACTTCTGCTGGAATCTCTGCGGATGATGATACTGGCTTGCAGAATGTAATAAACTATCTCCGACGGTCAAAGGAAATAGCGGAAACGGAGATCTCTTTGTTAAAACAGGAAAAGTTGCGGTTACAATCACAACTCGAGAGTGCCCTAAAGGCAGCAGAAGGTGCCCAGGAGTCACTTCGTGTTGAGCGTGCAAGCTCAAGGTCATTGTTGTTCTCAGAAGATGAGTTCAAATCCCTACAGCTTCAGGTTAGGGAAATCAGTTTGCTTCGTGAGAGCAATCTGCAACTCAGAGAGGAAAACAAATACAATTTCGAGGAATGCCAGAAATTGCGAGAAGAAACTCAGAGGGCTGCAACTGAGTGTGCAAAGCTGGAGAATGTTTTGATGGAGAAACAGATTGAGTTGGAAGCCCTTAAGAAAGAAATTGAAACACAGAGAACAGAAAAAGACGGCCTGGAGAAGAGGGTCACTGAGTTAATTGAACGGTGCAAGAACATAGATGTAGAGCATTATGAGCGCTTGAAGAATGATGTTCAACAAATGCAGGGGAAGTTGAAAGAGCGGGATACTCAGATCGAAGAAATTAGTAGGCTGCTGTCTCAAAAGCAAGATAGAGTTTCGCAGTTGGAGCAGGACCTTGAGCATAGTAGGTTGCAACTGAACGAGAAAGAAAAGAGAGTTCATGATATATTGCAGACAGAGGAAAAGCATAAAAGGCTAATAGCTCAATTAAAGAGAAAGGCTGAGACACTGACAAAGGAAAAAGAGGAGCTGATTAAAGAAAGTCAAGCTCTTTCAAAGCAGTTGGAGGAATCTAAACAAGGGAGAAGGCCTATTGGAGATAACTTGGAGCAGGTCATGAAGGAGAAGGAGGAAAAAGAGGCCAGGATACAGATTTTGGAGAAAACTGTCGAGAGACAGAGGGATGGATTGAAGAAAGAGAGAGAAAGGCGCCAAAAAATTGAGGAAACGATTGTGAACTCCATCAAAAGAGCTGATGAGGAGAAAACAAAAGTTGCAAGGGAACTTGAGAAACATAAGCAAGTTTTGAGGCAGGTTTCCGATGAGCTGGAAAGGCTGAAGCATGCCAAAGACAGTCTTCCTGAGGGAACCTCGGTCATTCAGCTTCTTTCTGGGAACTTACTAGATGATCTCGCCTCTGGCTATGTGTTGGCCATTGAAAATTTTGAACGAGTTGCAAATACCCATGCCACTGAGCTTGGTGCTCGTGCTTCTACTCCGGAAATGGAGACTTCCTTGGCTGCTGCTGCAGTTTCTGCTGCTTCTGCTCAAGCCACCATAAGTGCTCCTGAAACAAGCAACATGGCACCTAAAGCTGTGGAAGAAAAGGAAAGAAGATCCATTCATCCTAAACCCAATATTGAAACTCGTAAAACAGGGAGGAAGTTGGTTCGGCCACGTCTGAAAATTGATGAGCCTCAGGATGTTGAGATGACTGATGCTGAAGGTTCTAACAATGGTGGAAAGCTTGGACCTCCTGCCGACACTGAAAGTAATATCACGGCATCATTGCAGCATCCGCTTCGTAAACGTCTGGCATCACCTGCTTCTGAGCTGTATGAGCAGTCCCAGACCCAAGGAGAAGGTGACACTCCAACGCCTTTGCTGAAGAAGTCCAAAGGAGTAGATGTATCACATGATGCTGCTCAAGAAAAAGACGGGTCTGCTCTGGAGAATCTTAATGTGGGACTAACGATTGAGGAATCTTTTGATGCACTTCATGATCTACCCCAAGCTCCTAGTGAGGAAGCTGTTGATGAGAAGGAAGACGCTCAGGTCCCTGAGGAGAAGGCTGAGGAAAGGGAATCACAGCAATTAGAGGAGGCTAGTGATCCTGAAAGGAAGAATGCTAAAAGTATTTCCTCTGAGGAGATTCTGGATAAGTCAGGTGATACAGGAATCATTTCACATGATGGGTCAAAGGAACCCACTGATCAAGACCATATTAACTCAGTTGTAGAGTTCATTAGCGATAAAGAAGAAGGAGAGCTTATTCCAGATGCTGCAGATGTTGAGAGCGGTGGTGATGTGTCTAATCTTCTTGAGAGTCCAGAAGTAGAAGAAGGCAAGCCTGAGCAGGCATTAACTCCCACAACTTCGCCATGTAGGGCTGATGATGTGGATGTCGGAGCTACTGTAACGGACCCGAGTGAGATCAACTCTTCTGAAGTTCCACAGCTTGAAAAGGTTGAAGATGGTGAGATAACTGAGGAAACTGCTGAAGGTTCTGATAAAGTGAATGAGGGGAGTGATGCGGTGACGGTGGAGATTGAGCAGACTTCTGAAGGTGCTGCAGGCAGTGAAAATGCTGGTGCTTCCGCAGAAGTTGCTAGCTTGGTACATAGTAGTTCCAGTATTAATGCTGAAGTGGAAGAGAGCAAACGGGCTTCACCAGCCAGTGGCACCTCAACTACCATTAATTTGTTGGAGAGAGCCAGGGAGCGAGCTGCCCTGAGACAGGCTGGAGTTGTGACTCCCCCATCCAACAGGGGCCGTGCTAGAGCAGTACGTGGCCGAGGTGCTCGTGGACGTGGTGGCCGTACTGGGCGTGGCCAGGGTGAACCAGGACAAAGCTCCAAATAA
Protein Sequence
- >Eucgr.F04480
MPLFISDDELSRCSNDGALVAEKADAFIRNLQRELESVRAQQDASAITAEQTCSLLEQKYLSLSSDFADLQSNSLHLQSSLDRHLSDLADLQSQKHHLHLRCMEKDGEIERLATEVSELHKSKRQLMELVEHKGLELSEKNATIKSYLDKIVSLTENASQKEARLSEIEAELTRSQAACSRLSQEKELIERHNVWLNDELKAKVDSATELRRVHADLESDLSAKLADVDRQLANSSSSLNWNKERVRELETKLVAMQEELCSTKDSAAANEERFQAEISTVNRLVELYKESSEEWSRKAGELEGVIKALETHLTQVENNNKEKLEEELSTRRQLEKEAEDLKAKLEKCEAEMESLRKNNESNLLPLSSFSLESWKGSSDPYDMVQDDRAIVPRVPIGVSGTALAASLLRDGWSLAKMYAKYQEAVDAMRHEQMGRKEAEAVLQRVLYEIEEKAEAILDERAEHERMVEAYSMINQRLQQATSEQLNLDRAIGELKADLKKREREYVLAQHEVVDLQKQVTVLLKECRDIQLRYGSSLHNYSDDKGTDGAVEMIAEYDTEKVISDRLLTFKDINGLVEQNVQLRTLVRSLSDQIENKELEFKDKLEMELKKQTEEAASKVAAVLHRAEEQTVMIESLHTSVSMYKRLYEEEQKHNSSNAHTAVAVPEEGRSGFQLLIEGSQEAAKKAQEHAVERVRCLEEELAKSRSKIILLQSERDKMALEADFTREKLDRLMNESEHKREEINGVLARNVEFSQLIVDYQRKIRESSESSHSAEELTRKLNMEVAVLKQEKDILSSAERRACAEVQSLSERLYRLQATLDTIQSTEEVREEARAAEKKRQEEYIQRIQKEWAEAKKELQDEHDNVRKLTLDRDQTLKNSMKQVEEMGKELASALHAVAGAESRAAVAEAKLSDLEKRIRSSDSKILEVANAGGSLSISTNEVISELQIAKEEIEKLREEAQANRDHMLQYKSIAQVNESALKQMECAHENFKTEAEKLKQSLEAEVVSLRERLSQMETEVNNKSQQVVSMNVEKEEALASLLAEITSLKEGNTLKGSIVDTLETKISLLEDKWKSEHERWRSAQANYERQVILQSETIQELTKTSEALASLQQETDELRRLANSQKSENDELKARWEAEKSMLVESKAEAEKKYNELNEQNKILHDRLGALHIQLAERDRTSAGISADDDTGLQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKAAEGAQESLRVERASSRSLLFSEDEFKSLQLQVREISLLRESNLQLREENKYNFEECQKLREETQRAATECAKLENVLMEKQIELEALKKEIETQRTEKDGLEKRVTELIERCKNIDVEHYERLKNDVQQMQGKLKERDTQIEEISRLLSQKQDRVSQLEQDLEHSRLQLNEKEKRVHDILQTEEKHKRLIAQLKRKAETLTKEKEELIKESQALSKQLEESKQGRRPIGDNLEQVMKEKEEKEARIQILEKTVERQRDGLKKERERRQKIEETIVNSIKRADEEKTKVARELEKHKQVLRQVSDELERLKHAKDSLPEGTSVIQLLSGNLLDDLASGYVLAIENFERVANTHATELGARASTPEMETSLAAAAVSAASAQATISAPETSNMAPKAVEEKERRSIHPKPNIETRKTGRKLVRPRLKIDEPQDVEMTDAEGSNNGGKLGPPADTESNITASLQHPLRKRLASPASELYEQSQTQGEGDTPTPLLKKSKGVDVSHDAAQEKDGSALENLNVGLTIEESFDALHDLPQAPSEEAVDEKEDAQVPEEKAEERESQQLEEASDPERKNAKSISSEEILDKSGDTGIISHDGSKEPTDQDHINSVVEFISDKEEGELIPDAADVESGGDVSNLLESPEVEEGKPEQALTPTTSPCRADDVDVGATVTDPSEINSSEVPQLEKVEDGEITEETAEGSDKVNEGSDAVTVEIEQTSEGAAGSENAGASAEVASLVHSSSSINAEVEESKRASPASGTSTTINLLERARERAALRQAGVVTPPSNRGRARAVRGRGARGRGGRTGRGQGEPGQSSK*