Information report for Eucgr.F03948
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Citrullus lanatus: Cla97C02G048640
- Cucumis melo: MELO3C014532
- Cucumis sativus: CsGy6G022870
- Glycine max: Glyma.14G005800
- Gossypium hirsutum: Gohir.A10G069101, Gohir.D10G082300
- Juglans regia: Jr07_32080
- Manihot esculenta: MANES_04G104700
- Nicotiana attenuata: A4A49_21629
- Populus trichocarpa: POPTR_003G180100v3
- Prunus avium: Pav_sc0000663.1_g240.1.mk
- Prunus persica: PRUPE_2G099100
- Rosa chinensis: RchiOBHm_Chr1g0336931
- Solanum lycopersicum: Solyc03g117120.3
- Solanum tuberosum: PGSC0003DMG400014195
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: A0A059BX19
- RefSeq: XP_010063548.1
- EMBL: KK198758
- AlphaFoldDB: A0A059BX19
- KEGG: egr:104450616
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: A0A059BX19
- eggNOG: KOG0845
- STRING: 71139.A0A059BX19
Sequences
CDS Sequence
- >Eucgr.F03948
ATGGCGTCCACTTCTCTCCTTCCTTCTCCCGATGAAGTTTGCTACACTAGACACAGCTTCTCGACTGCTTCAACCTGTGGGGTATACAGTCATGCAGGGCCATCGGACTCTGATGTTTCCATAAAACTAAAGAAAAGGAGGATATCTTTTTGTCCAAGTTCCTTGTCAAATTGGCTTTTGGGTGAGAGAGAAATTCCTTTGCCTATTTTAGAGTTTTCCGACTATTTTATTGAACCTTGCCTGGAAGAACTAGCCACTCGGGAGTTTGAAGATCCTGGTTATTTGAGTCGAGTTCAGAATTTTACAGTAGGGAGGTTTGGTTATGGGTTCGTTAAGTTTTTAGGAGAGACAGATGTTAGAGGGTTGGATTTAAATGAAATTGTGAAGTTTGCAAGGCATGAACTAGTTGTGTATGGAGATGAAAGCTTGAAGCCTTCAGTTGGCCAAGGACTCAACAAAGCTGCTGAGGTTACTTTGGTTCTACAAATTGGATCACTTGATGAGGGCCGGCTGGATGATATTGTCACAAGATTAAGACGGAGCACAGAAAGACAAGGTGCCAGCTTCATTTCATTTAATTCTACAAAACGTGCATGGAAATTCTTAGTTCAACATTTTAGTAGATTTGGTCTGAGTGAAGATGATGAGGAAGATATCGTTATGGATGATCCCCCAACCGTTCAAGATCCCGCAATGGAAATTGTTGGGGAGATTTCTGATGATGATGAGGAACCTCGAGTTAATCCAGTTGGGCCTGACCTTTCTCATTCTCTTCCTGCTCATCTTGGTCTTGACCCGGCAAAGATGAATGAAATGAGAATGTTGATGTTTCCTAACGATGAAGAGGAGCTTGAGTACATAAATGAGATACCTCCTGGAAAGTCATCCTTAAGCAAAGATTATGCGAGATCGTCCTTTCAGAACTCTGCCCAGAGGATGACTCATAAAGTGAGTCCTCCTGTGGCACGAAGGACACCATTACCTTTGCTGGAGTACAAACCTTGTACTGCTGACTCTAGCTCTCCAGGAGCCATTCTTTTGATGCAACAAAATAAGGATATGCCTTTGAAGGCAGCAAGAGTGGAAGGGTTTAAACTGGACACAACACGTGAGACCCCTTTAACTGGACACTATTCGGGGAATATTGTTGATGCTGGCCTTTTTATGGGTAGGTCATTCCGAGTTGGTTGGGGTCCAAATGGTGTCCTTGTCCACTCAGGTGCACCTGTAGGTAGCAAGGACTCACGGAGGGTTTTATCTTCTGTAATTCACATAGAAAAGGTTGCAATTGATAAAGCTGTTAGAGATGAGAGCAACAAAGTCAGGAAGGAGTTGGTTGAGTTGGCTTTTGATTCCACATTGAATTTCCATGAGTCATTAAATCACAAAACAAAAGAAGTCGAGGTTGGGTCTTTCAAACTCAAGCTTCAAAACTTGGTTTGCGACCGCTTAACACTGTCAGGAGTTTGCCGAAACTACATAGATATAGTTGAGAGACAGTTGGAGGTTTCTGGGTTGTCTTCATCTGCCAAAGTGATTTTGATGCACCAAGTGATGGTTTGGGAGTTGATAAAAGTTCTTTTTTCTGAAAGAGAGAATAATGGGCAGTCAAAATCAGTAGGTGCTGACAATGAGGAAGATGTGATGGAGGATATCAAAGATGGTTCACCCGAAGTTGACCCTGAAGCACTTCCTCTTATTCGAAGAGCAGAGTTCAGTTACTGGTTGCAAGAGTGTGTTTGCCACCGTGTACAGGCAGAAATAAGCTCAATAAGTGAGTCGAGTTATCTAGAGCATCTGTTCTTACTTTTGACTGGCCGACAGCTGGATGCTGCTGTGGAGCTGGCTGCTTCTAAAGGAGATGTAAGGTTGGCTTGTTTAATCAGCCAAGCAGGTGGTTCCCTAGTAAACCGTTCCGACATCTCTCGACAGCTTGATCTTTGGAGAACTAATGGATTGGACTTCAGTTTTATTGAGAAAGATAGAGTAAGAATTTTGGAATTGCTTGCTGGCAACATTGGTGGTGCCCTGCGTGATATTGGAATAGACTGGAAGAGATTTTTGGGGTTATTGATGTGGTACCAACTACCACCTGACTCCTCATTGCCCATTATATTTCAAACTTACAAGCAACTGCTCAATAATGGAAGAGCTCCTTATCCTGTCCCCGTGTATATTGATGAAGGAGTGGCAGGAGAGTCAGTGACTCAGACTAAGGAGGAACGGTTCGACTTCTCATATTATCTTATGCTTCTACATTGTAATCAAGATAATGAATTTGGCTTGTTGAAGAGAATGTTTAGCACGTTATCTTCGACAAATGATCCACTTGACTACCATATGATCTGGCATCAGCGTGCTTTACTTAAAGCAGTTGGAGCTTTCAGTGCAAATGATCTTTATGTTCTTGACATGGGACTTGTTTCACAGTTGCTCTCTCTGGGCCAATGTCACTGGGCCATCTATGTAGTCCTTCACATGCCTTATCAAGAGGACTATCCATTTCTACAGGCCACTGTAATTCGTGAAATTTTGTTTCAATACTGTGAAACATGGAGTTCAGAAAAGTCGCAACAGCAATTTATTGAAAAGTTGGGTGTCCCATTGGCTTGGTTGCATGAGGCAATGGCAGTTTATTTTAACTACCATGGAGACATATTAAAATCTTTGGAGCACTTTCTTCAGTGTTCGAATTGGCCAAAAGCTCACTCTATCTTTGTGACTTCAGTTGCACATTCATTGTTTTTATCAGCAAAGCATTCAGAAATATGGAGGTTGGCATCTTTGATGGAGGAACACAAGTCAGAAATTGAAAACTGGGACTTAGGCGCAGGGATTTACATATCATTTTATTCAAGAAAAAGTGCTTTGCTGGAAGATGATGATAGTTTGAATGGATCGGACTCACTTGAGAGCAAAAATGCTGCCTGCAAAAATTTCCTTGATCAATTAAATGAGTCATTGGCGGTTTGGGCGGGCAGATTACCTCTAGAAGCTAGAGTTGCATACTCAAAGATGGCCGAGGAGATCTCTAGTCTGCTTTTATCAGACCTATCTGAGGATCCAATGAGGGATCTTCAGCTAGGCTGCTTTAGAAATGTATGCAGTGCTCCGGTTCCTGAAGATGTTCGAGCGAGTCATTTGCAAGATGCAGTGGCCCTATACACTTGTTATCTGTCAGAGTTGGCTTCTTGA
Protein Sequence
- >Eucgr.F03948
MASTSLLPSPDEVCYTRHSFSTASTCGVYSHAGPSDSDVSIKLKKRRISFCPSSLSNWLLGEREIPLPILEFSDYFIEPCLEELATREFEDPGYLSRVQNFTVGRFGYGFVKFLGETDVRGLDLNEIVKFARHELVVYGDESLKPSVGQGLNKAAEVTLVLQIGSLDEGRLDDIVTRLRRSTERQGASFISFNSTKRAWKFLVQHFSRFGLSEDDEEDIVMDDPPTVQDPAMEIVGEISDDDEEPRVNPVGPDLSHSLPAHLGLDPAKMNEMRMLMFPNDEEELEYINEIPPGKSSLSKDYARSSFQNSAQRMTHKVSPPVARRTPLPLLEYKPCTADSSSPGAILLMQQNKDMPLKAARVEGFKLDTTRETPLTGHYSGNIVDAGLFMGRSFRVGWGPNGVLVHSGAPVGSKDSRRVLSSVIHIEKVAIDKAVRDESNKVRKELVELAFDSTLNFHESLNHKTKEVEVGSFKLKLQNLVCDRLTLSGVCRNYIDIVERQLEVSGLSSSAKVILMHQVMVWELIKVLFSERENNGQSKSVGADNEEDVMEDIKDGSPEVDPEALPLIRRAEFSYWLQECVCHRVQAEISSISESSYLEHLFLLLTGRQLDAAVELAASKGDVRLACLISQAGGSLVNRSDISRQLDLWRTNGLDFSFIEKDRVRILELLAGNIGGALRDIGIDWKRFLGLLMWYQLPPDSSLPIIFQTYKQLLNNGRAPYPVPVYIDEGVAGESVTQTKEERFDFSYYLMLLHCNQDNEFGLLKRMFSTLSSTNDPLDYHMIWHQRALLKAVGAFSANDLYVLDMGLVSQLLSLGQCHWAIYVVLHMPYQEDYPFLQATVIREILFQYCETWSSEKSQQQFIEKLGVPLAWLHEAMAVYFNYHGDILKSLEHFLQCSNWPKAHSIFVTSVAHSLFLSAKHSEIWRLASLMEEHKSEIENWDLGAGIYISFYSRKSALLEDDDSLNGSDSLESKNAACKNFLDQLNESLAVWAGRLPLEARVAYSKMAEEISSLLLSDLSEDPMRDLQLGCFRNVCSAPVPEDVRASHLQDAVALYTCYLSELAS*