Information report for Eucgr.D02653
Gene Details
|
|
Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Citrullus lanatus: Cla97C05G079940
- Glycine max: Glyma.19G261200, Glyma.03G262100
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Manihot esculenta: MANES_05G015200
- Musa acuminata: Ma08_g12120
- Populus trichocarpa: POPTR_002G181400v3
- Prunus avium: Pav_sc0001046.1_g510.1.mk
- Prunus persica: PRUPE_2G200900
- Sesamum indicum: SIN_1002242
- Vitis vinifera: VIT_15s0048g02380
Sequences
CDS Sequence
- >Eucgr.D02653
ATGGGGATGGAGCCCATTCTTCTTACTGGCTCGATGCTTTTCCCGCCCTGCGACGTCGTCCCTGACTTCGTCGATTTCGATGCTGTCGACACCCCCGCCGACGCCGCCCACCATACCCTCCTCAACGCCAACGACTTCTTCGGAGGTATTGACCGCATTCTCGACAGCATCAAAAGCGGCGATGCGCTCCCTCCTCCTCCTTCTCCCCCTCCTCCTCCTTCTCCTCCTAGCTCTGAGGAGGAGACTCGTGCTTTTGTCGACGCTGCCCCTGGATGCCTCGTCGATTGTGACTCTCAGTCCTTGTCTAGCAATGGAGGAGAGCAAAACGGGTTTCAGAGGCACGATGACCGGGAAAGCCAAAGAGAAGACCTCTCTCGCGAGGAAAGGAGCAATAAGAGAAGCAGGTGCGGCGCCCACGGTGGCCTCGCTCTCCACGCGATGAAGGGGAATCCTTACCACCGGGAGAGGGACAAGGAAAGACAATCGGGCCTGAAGAGGCTGCGTGATTGGGATGAGTTCGACAGGAGAGATAGGGATCACATCAGGAGAAGAGAGCACCGCAGCGGTTCTGGACGACGGGATGGGAGGGAGAGGGAATGGAGAGATAGGGAAGCGAACGGCTACTGGGAGAGGGACCGCCTAGGCTCCAATGAGATTGTTTTCCGATTAGGTGCTTGGGAAGCTGATCGTAGCAGAGAGGAGAAGTCCAGAATTGACAATATTCAGGACTGCAATGGGAGGGTAGATGACAAGCCTGAAGATCATAAGGAGAGATTTCCTGAGGAACATGCCCGGCAATATCAGTTGGATGTTCTTGAACAGGCCAAAAGGAAGAACACAATAGCTTTTCTGGAAACAGGGGCAGGGAAGACCTTAATCGCTGTTCTGCTCATCAAAAGTGTTTGTGCTGATCTGCAGAAGCTAAACAGGAAAATGCTATCTGTATTTCTAGTGCCCAAAGTTCCGCTTGTTTATCAGCAAGCCGAAGTAATCCGCGAGCGTACTGGTTACCAAGTTGGTCATTATTGTGGTGAAATGGGTCAGGACTTTTGGGATGCTAGACGGTGGCAACGTGAATTTGAGACAAAGCAGGTTTTGGTGATGACCGCTCAAATACTGTTGAACATCCTAAGGCACAGTATAATAAAAATGGAAGCTATAAATCTCCTTATATTGGACGAATGCCATCATGCTGTGAAGAAACATCCATATTCCTTGGTGATGTCTGAGTTCTATCATACCACACCCAAAGAGAAGAGACCGTCTGTTTTTGGAATGACTGCTTCACCTGTTAATTTAAAGGGCGTTTCAAGTCAAGTGGATTGTGCAATCAAAATTAGGAATCTTGAAAGCAAGCTTGATTCTGTTGTCTGTACCATAAAAGATCGAAAGGAGCTGGAAAAGCATGTTCCAATGCCATCTGAAGTTGTCGTGGAGTATGATAAAGCAGCTAGTTTGTGGTCCCTCCATGAGCAAATAAAACAAATGGAAGTGGCAGTTGAAGAAGCTGCACAATCTAGTTCTAGGAGAAGCAAGTGGCAATTTATGGGTGCCCGTGATGCAGGTGCAAGGGAAGAACTGCGCCAAGTTTATGGTGTTTCTGAAAGAACGGAGAGTGATGGTGCTGCTAACTTAATACAAAAGCTTAGAGCAATCAATTATGCTCTTGGTGAGCTGGGACAATGGTGTGCTTACAAGGTTGCGCTATCCTTCTTGACAGCTCTGCAGAATGATGAGAGAACGAATTACCAGCTCGATGTTAAGTTTCAGGAATCCTACCTTAGTAAAGTTGTATCCCTCTTGCAATGCCAACTGTCAGAGGGGGCTGCTTTTGAGAAAGATATGATGTCCGTGGAAAGTGGTGTCAGATTGGATGTAACTAATATTGATGAGATGGAGGAAGGAGAGCTTCCTGACAGTCATGCTGTTTCCGGTGGAGAGCATGTGGATGTCATAATAGGAGCAGCTGTGGCTGATGGAAAGGTGACTCCAAAAGTGCAGGCATTAATTAAAATACTTCTCGGATACCAACATACAGAGGATTTTCGGGCAATTATATTTGTTGAGCGTGTTGTTGCTGCTTTGGTTCTTCCTAAGGTGTTTGCAGAGCTTCCATCTTTAAGTTTTATCAAATGTGCGAGCTTGATTGGGCATAATAATAGTCAGGAAATGAGGACATGCCAAATGCAGGAGACTATTGCCAAATTCCGAGATGGTCGTGTGACATTGCTGGTTGCAACTAGCGTTGCTGAGGAAGGTCTTGATATACGGCAATGCAATGTTGTAATTCGATTTGACCTTGCAAAAACTGTTTTGGCATACATTCAGTCACGTGGCCGTGCTAGAAAGCCCGGGTCAGATTACATCTTGATGGTTGAGAGGGGAAATTTGTCTCATGCGGCATTTTTGAGGAATGCAAGGAATAGTGAGGAGACACTGCGAAAAGAAGCAATTGAAAGAACTGACCTTAGTCATGTGAAGGACACATCCAAGTTAATTTCACAGGAGGCTATACTAGGTACAGTGTACCAGGTAGAGTCAACTGGTGCTATCGTCAGCTTAAACTCTGCTGTGGGACTTATTCATTTCTACTGCTCTCAGCTTCCGAGTGACAGATATTCAATTCTTCGTCCTGAATTTATCATGGAGAGGCATGAGAAGCCTGGAGGCCCCACCGAATATTCCTGCAGGCTTCAGCTCCCTTGCAATGCACCTTTTGAAAAACTTGAGGGCCCTATATGTAGCTCAATGCGACTTGCACAACAGGCTGTTTGCTTGGCTGCTTGCAAGAAGCTCCATGAGATGGGAGCATTCACTGACATGCTATTACCAGATAAAGGAAGCGGGGAAGAAGGGAAAACCGTTGACCAGAATGATGAAGGAGATCCTCTTCCTGGCACTGCCCGACATAGGGAGTTTTATCCTGAGGGTGTGGCTGACATTCTCCAGGGAGACTGGATCTTGCATGGACGAGATGGTTGCAGTGACTCCAAATTGCTTCTTCTTCATATGTATGCTGTCAAATGCACAAATATTGGCTCTACGAAGGATACGTTTTTAACTCAAGTTTCAGGCTTTTCTGTACTGTTTGGAAATATGCTGGATGCAGAGGTGTTATCGATGTCCATGGATCTATTTATCGCTCGAACCATGATAACAAAGGCATCTCTTCTTTATAGGGGCTCAATTAGTATAACTGAAAATCAGTTAAAATCTCTTAAAAGCTTTCATGTACGATTGATGAGCATTGTGCTGGATGTGGATGTTGAACCTTCAACCACTCCATGGGATCCTGCAAAGGCTTATTTATTTGTCCCTTTGGTTGGCGATAAATCTATAGATCCACTTAAAGAGATTGACTGGGATCTGGTCGATGAAATTGTCGGAACAAATGCATGGAGCAATCCACTTCAGAGAGCCCGGCCAGATGTGTACCTAGGTACAAACGAGCGTACACTTGGTGGGGACAGAAGGGAGTATGGGTTTGGGAAGTTGCGGCATGGTATGGCTTTTGGACTCAAGTCCCACCCAACTTATGGGATTAGAGGAGCTGTAGCACAATTCGATGTTGTGAAAGCTGCTGGATTGCTTCCTCAGAGAGATGCCTTTGAAATGGAAGAGAATCAGGACTTAACCAAAGACAAATTGATGATGGCTGATTCTTGCATAAGTTCTAATGATTTGGTGGGAAGAATTGTGACGGCTGCACATTCTGGAAAGAGGTTTTATGTTGACTCCATATGTTATGATATGACTGCAGAGAACTCATTTCCAAGAAAAGAAGGCTATCTTGGCCCATTGGAGTATAGCTCATATGCTGATTATTACAGACAAAAGTATGGGGTTGAATTGGTCTATAAACAACAACCATTGATCAAAGGACGTGGAGTGTCATATTGCAAGAACTTACTGTCGCCTAGATTTGAACACTCAGAAGGTGAATCTGAGGAAATTCTGGACAGGACATATTATGTGTTCCTCCCCCCCGAACTCTGTCTAGTGCATCCACTTCCCGGGTCACTTGTTCGTGGAGCTCAACGATTGCCTTCAATAATGAGAAGGGTAGAGAGCATACTGCTTGCAATTCAACTCAAGGATGTAATAGATTATTCGGTCCCTGCTTCAAAGATCTTGGAAGCTTTGACTGCAGCCTCATGTCAGGAGACATTCTGTTATGAAAGAGCAGAGCTCCTTGGAGATGCTTACTTAAAATGGGTTGTAAGCAAATTTCTATTTCTTAGATATCCTCAAAAGCATGAGGGTCAGCTGACCAGAATGAGGCAACAAATGGTGAGTAACATGGTCTTGTATGAGTATGCTTTGAATAAAGGACTTCAATCATATATCCAAGCGGATAGATTTGCTCCATCTAGATGGGCTGCACCAGGAGTGCTTCCTGTCTTCGATGAGGATACAAAGGATGAAACTTCCTTGTTTGATATGGAGCATTCACTTGCTGAAGTTGGAGGTAGGTCAGATGTAATTGGGGCTGAGTTTGATGATGAAAGCATTGAAGATGGTGAAGTTGAGAGTGACTCAAGTTCTTACAGAGTTCTGTCTAGCAAGACACTAGCAGATGTTGTTGAAGCATTGATTGGGGTGTATTATGTTGAAGGTGGGAAGAATGCTGCCAATCACTTCATGAAATGGGTAGGAATACGGGTTGAGTTTGATAATGACGAGAAAGAATGTGCAATCAGGCCATCAAATGTCCCAGAGAGCATCCTCAGGAGTGTCAATTTTGATGCTTTAGAATCTGCCCTTAATTTGAAGTTTAATGACAGAGGCTTCTTGATAGAAGCTATTACTCATGCTTCACGACCATCTTCTGGAGTCTCTTGCTACCAGCGCTTAGAGTTTGTTGGTGATGCAGTTCTGGATCATCTTATTACAAGACATTTGTTCTTCACTTATACTGATCTTCCACCTGGCCGCTTGACTGATTTACGAGCTGCTGCTGTAAACAATGAGAACTTTGCACGTGTCGCGGTTAAACACAAGCTCCATTTACACCTTCGGCATGGGTCCAGTGCCTTGGAGAAGCAGATCAGGGACTTCGTAAAGGAAGTTCAGGATGAATTGTCAAAGCCAGGTTTCAACTCTTTTGGTTTAGGGGATTGTAAAGCACCAAAAGTCCTTGGCGATATTGTTGAATCCATTGCTGGTGCTATATTCCTTGATAGTGGACATGATACTGCTGTTGTGTGGAAGGCTTTTCAGCCCTTGTTGCATCCCATGGTCACTCCAGATAGACTCCCAATGCATCCTGTCAGGGAGCTGCAAGAGCGCTGCCAGCAACAGGCTGAAGGCTTGGAGTATAAAGCCTCTCGAAATGGCAACTTGGCCACAGTTGAAGTCTTTGTTGATGGAGTACAGGTTGGGGTTGCTCAGAATCCACAAAAAAAGATGGCGCAGAAACTTGCTGCACGAAATGCTCTTGCTGTTCTGAAAGAAAGGGATACATCTGATGCTAAGGTGAACAATGATGGAAAGAAGAAAAATGGTAACCAAACATTTACGAGGCAGACACTGAACGACATATGTTTGCGTCGAAACTGGCCAATGCCATTATATAGGTGTGTAAATGAGGGTGGCCCTGCACATGCAAAGCGGTTCACGTTCGCCGTTCGTGTAAACACCACTGACAGGGGATGGACGGATGAATGTGTGGGGGAGCCCATGCCAAGTGTCAAAAAGGCAAAGGATTCTGCTGCTGTTCTTCTCTTGGAACTTCTAAACAAATGGTATTCTTGA
Protein Sequence
- >Eucgr.D02653
MGMEPILLTGSMLFPPCDVVPDFVDFDAVDTPADAAHHTLLNANDFFGGIDRILDSIKSGDALPPPPSPPPPPSPPSSEEETRAFVDAAPGCLVDCDSQSLSSNGGEQNGFQRHDDRESQREDLSREERSNKRSRCGAHGGLALHAMKGNPYHRERDKERQSGLKRLRDWDEFDRRDRDHIRRREHRSGSGRRDGREREWRDREANGYWERDRLGSNEIVFRLGAWEADRSREEKSRIDNIQDCNGRVDDKPEDHKERFPEEHARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSVCADLQKLNRKMLSVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQIKQMEVAVEEAAQSSSRRSKWQFMGARDAGAREELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVALSFLTALQNDERTNYQLDVKFQESYLSKVVSLLQCQLSEGAAFEKDMMSVESGVRLDVTNIDEMEEGELPDSHAVSGGEHVDVIIGAAVADGKVTPKVQALIKILLGYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEMRTCQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHAAFLRNARNSEETLRKEAIERTDLSHVKDTSKLISQEAILGTVYQVESTGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCRLQLPCNAPFEKLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGKTVDQNDEGDPLPGTARHREFYPEGVADILQGDWILHGRDGCSDSKLLLLHMYAVKCTNIGSTKDTFLTQVSGFSVLFGNMLDAEVLSMSMDLFIARTMITKASLLYRGSISITENQLKSLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPLVGDKSIDPLKEIDWDLVDEIVGTNAWSNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGLKSHPTYGIRGAVAQFDVVKAAGLLPQRDAFEMEENQDLTKDKLMMADSCISSNDLVGRIVTAAHSGKRFYVDSICYDMTAENSFPRKEGYLGPLEYSSYADYYRQKYGVELVYKQQPLIKGRGVSYCKNLLSPRFEHSEGESEEILDRTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESILLAIQLKDVIDYSVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSKFLFLRYPQKHEGQLTRMRQQMVSNMVLYEYALNKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDETSLFDMEHSLAEVGGRSDVIGAEFDDESIEDGEVESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHFMKWVGIRVEFDNDEKECAIRPSNVPESILRSVNFDALESALNLKFNDRGFLIEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHLHLRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGHDTAVVWKAFQPLLHPMVTPDRLPMHPVRELQERCQQQAEGLEYKASRNGNLATVEVFVDGVQVGVAQNPQKKMAQKLAARNALAVLKERDTSDAKVNNDGKKKNGNQTFTRQTLNDICLRRNWPMPLYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS*