Information report for Eucgr.C03024
Gene Details
|
|
Functional Annotation
- Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.
Homologous
- Actinidia chinensis: CEY00_Acc28651, CEY00_Acc22585
- Glycine max: Glyma.06G051600, Glyma.17G230000, Glyma.04G050800
- Gossypium hirsutum: Gohir.A07G022116
- Juglans regia: Jr06_04450, Jr15_03400, Jr15_03410
- Manihot esculenta: MANES_16G079300, MANES_03G047300
- Medicago truncatula: Medtr1g016490
- Populus trichocarpa: POPTR_018G054700v3, POPTR_006G230700v3
- Prunus persica: PRUPE_1G413700
- Rosa chinensis: RchiOBHm_Chr6g0310681
Gene Resources
- Pfam: PF05920 PF07526
- UniProt: A0A059CTW4
- RefSeq: XP_010049176.1 , XP_010049177.1 , XP_018726789.1 , XP_018726790.1
- EMBL: KK198755
- AlphaFoldDB: A0A059CTW4
- InterPro: IPR001356 , IPR006563 , IPR008422 , IPR009057 , IPR050224
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS50071
- Gene3D: 1.10.10.60
- CDD: cd00086
- eggNOG: KOG0773
- STRING: 71139.A0A059CTW4
Sequences
CDS Sequence
- >Eucgr.C03024
ATGGAGCATAATTTGTTTGATGTTTCGGTAGATATGTCAAACCGAGCCTCTTTCTTGCTGGATGGTGTTTCGGCACACGCATCTGCAAGCTCCTTCCTGCAGTCAGATATACTCAACAAGAATAACTCAGACCACACAGTCGGGTATCCAATACATTCGAACATTCAAGGAGAATCGATCGGTGATCTACAAGCTGGAATAACCGGTTCACAGTTTATTTCCAATGCGTCGGTTCCCTTTCATGGGATCGATGCCCTTCGGAATGCTCCTGACTTCAATGGAGCAATGCCAATTTCTCCTGCTTGTTTTCCTGCAATTTTGGCCTCAAGAAGGGATCTCCAAGAAAATATAAATGGCTTGCCAATTCCATTGCCATCAATTGATCTGTTAGAAGTTGGGAATATACCAAATGATGGCTCTAATGTTTCGCATATGTCATTGGGAACTTGCAGCTACGATGAACCGGCCGGCACGTGTAAGTGGAATGCTAACAGGTTTCAATCAAGAACTGTCTGTCCACCTTATCCTGTTGCCCGAAATACAAATACTGTTGGATGGATATCATCCGGGAACCTAAATATACATATGGGTTGTGCTTATTTTCCCCCTAATTCCAGTAATGAGCTCTCACTCAGCCTTGCCTCATCAAAGTCTTCGATAATTAATTTGCCGAATATCTCTGATCAGTGCTCAGAGATAAGCAATGCCGGTGCGAGTCACCATTTTTCAAATGAAAGAAGAGCATACAAATCAGGACTGAATTCCTGCAACAATAAGGAGCTTTCTCTATGTTCTGCCTCTTACGGGGCACCTCAGTTGTCACAACTCATAGCCGGATCCAAGTACTTGAGTGGAATTCAGGAAATTCTTGCTCAGATAGCAAGCTATTCACTGGAAAATCTAAACAAGGTCAGTTATGTAAGTAGCGGGCTCGGGAGTGGGACTAGCAAGTCGCAATTCTCATCAGACTGTCGTGTCGATGAAGGACAAGAACTTGAAGTTTTTGGCCAGCGACAAGAAGCCGAAGCTAAGAAAGCCCAGTTGTTGACTCTGCTACAAGTGGTCGATGACCGATACAACCAATGCTTGGACGAGATCCACACAGTGATATCTGCATTTCACGCGGCGACTGAACTGGACCCAAAGATACACACCCGCTTCGCACTTCACACCATCTCGATTCTGTACAAGAACCTCAGAGAGAGGATCAGCAACTATATCCTTGCAATGGGGGAGGATTTCGGCCACTCAAGCACAGGAGATCGGGCAAGATCTTTTGAGGCCTCATTCATACAAAGGCAGTGGGCACTCCAGCAGCTCAAAAGGAAAGACCAACAACTATGGAGACCCCAGAGAGGCCTACCGGAAAAGTCCGTCTCAGTGCTACGGGCTTGGATGTTTCAAAACTTTCTTCACCCGTATCCCAAGGATGCCGAGAAGCATCTACTGGCACTCAAAAGCGGACTGACAAGAAGCCAAGTATCCAATTGGTTTATCAACGCACGTGTCCGTCTTTGGAAACCAATGATCGAGGAAATGTATTCCGAGATGAATCGAAGGAAGGCTCATCACAATGAGGATGGAAGCAGTGGTGCTAACCAAATCCAGAGGAGCATCAACATCCAAAAGTTTCGCATGAATTAA
Protein Sequence
- >Eucgr.C03024
MEHNLFDVSVDMSNRASFLLDGVSAHASASSFLQSDILNKNNSDHTVGYPIHSNIQGESIGDLQAGITGSQFISNASVPFHGIDALRNAPDFNGAMPISPACFPAILASRRDLQENINGLPIPLPSIDLLEVGNIPNDGSNVSHMSLGTCSYDEPAGTCKWNANRFQSRTVCPPYPVARNTNTVGWISSGNLNIHMGCAYFPPNSSNELSLSLASSKSSIINLPNISDQCSEISNAGASHHFSNERRAYKSGLNSCNNKELSLCSASYGAPQLSQLIAGSKYLSGIQEILAQIASYSLENLNKVSYVSSGLGSGTSKSQFSSDCRVDEGQELEVFGQRQEAEAKKAQLLTLLQVVDDRYNQCLDEIHTVISAFHAATELDPKIHTRFALHTISILYKNLRERISNYILAMGEDFGHSSTGDRARSFEASFIQRQWALQQLKRKDQQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDAEKHLLALKSGLTRSQVSNWFINARVRLWKPMIEEMYSEMNRRKAHHNEDGSSGANQIQRSINIQKFRMN*