Information report for EJB05_44142
Gene Details
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Functional Annotation
- Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.
Homologous
- Actinidia chinensis: CEY00_Acc17446
- Capsicum annuum: T459_31114
- Juglans regia: Jr04_14480
- Lactuca sativa: Lsa010343
- Panicum virgatum: Pavir.2NG262600.1.p, Pavir.2KG218200.1.p, Pavir.2KG218200.3.p, Pavir.2KG218200.2.p
- Populus trichocarpa: POPTR_004G020300v3
- Setaria italica: Seita.2G131900.1.p
- Setaria viridis: Sevir.2G137100.1.p
- Solanum lycopersicum: Solyc09g009120.2.1
- Solanum tuberosum: PGSC0003DMG400029413
Gene Resources
- Pfam: PF04818
- UniProt: A0A5J9TGW8
- EMBL: RWGY01000039
- AlphaFoldDB: A0A5J9TGW8
- InterPro: IPR006569 , IPR008942 , IPR045154 , IPR047415
- PANTHER: PTHR15921 , PTHR15921:SF3
- SUPFAM: SSF48464
- PROSITE: PS51391
- Gene3D: 1.25.40.90
- OrthoDB: A0A5J9TGW8
- CDD: cd16982
Sequences
CDS Sequence
- >EJB05_44142
ATGCGCGCGTCCGCGGCCTCCATGGAGACCCCAGCCCCGGCCCGCAGATCCGCTGCGCCCGACCCCAAGAAGCCGCGCCTCGCCCAGCCGGCGCCGCGGGACCCCAGATCTTACGCCGCCGCCTCCAATGGCGCCTCGCAGGCCGCGGCCGCCGCCGAGCTGGCCATGGCCGACGAGCTGCTCGCGCAGTACCGCACCGCGCTCGGCGAGCTCACCTTCAACTCCAAGCCCATCATAACCAACCTCACCATCATCGCCGGCGAGAACCTCCAGGCAGCCAAGCCCATCGCCGGCCTCATCTGCTCCAACATCCTCGAGGTTCCAAGTGACCAGAAGCTACCATCTCTATATCTACTTGACAGTATTGTGAAAAATATTGGGAAAGACTATGTTAAGCATTTTTCTGCAAGATTACCTGAGGTGTTTTGCAAGGCATATAAGCAAGTTGATCCTTCAATACATCATAGCATGAGGCACCTTTTTGGAACATGGAAAGGAGTGTTTCCTCTGGCTCCGCTCCAAATGATCGAGAAGGAACTTTGTTTTCAGTCATCTGCCAATGGATCATCAGGTGCTGCATCGTCAAGGCCTGATTCTCAATCCCAGCGCCCATCCAATAGCATTCATGGACTGCTGGGAAGTGGTGGCAAGGCACCATTAACTACTGATGCTGGTGATGATATTGAGAGGGCTAACAGGATAAGTGCTGATAGAAATGCTGGACGGCGGTTAGATGCTCTGAATGCTAGGCCTAGCATACAGCGGACTCAGAGAGACCCTTTTAGCAATCCTATTCATGAAAAACAGGCAGGTAGAGATGCGAGGGGCCTTGGATTCTCCAACACTCCACAACAAGCTGCTGTAGGAGCTGGTCAAGTTCGCTCGAAAGCCAAAGTTCAAGATGGAATTGTGGGTCCATATCATACTGCTGGTGTTGGCTCTTCAGAGCAAAGATTAGACCGGAGGAGTAACCTTTATGCAAACAAGGATGTTCGGCCAGCAGTTCGTCTGGATGGTGCACTTCTCCCAACTCCTTCGATTAGTTCTGATATAATCAGTAGGGCTTCATCAAATAAAAACTGGAAGCTCTCTGAGGAAGAAGAGTATGTTTGGGATGATGTGCATTCTCAAGCGGCAGATTATGGTAGTACGAACACTGTAAGAAAAGGAGAATGGATGGCTGATGAGGGCAATGCTAAGTTTACAAGCTTACATAGGCCTAAATGGACGGAGGTCGGAGCTGTTGAACATCTAGACTCACATAAACTAGATAACTTACCAAGATTTGGACATGCGCCAGTTCAAGATAGAAGAATCCCGGCATATATGGATCAGGAAGAGTACCTTCAAGGTAAGCATGAAGTAGAATCAAGAATTGATAGGGAAATGAGGCCGGACGGACAAATATTTCCACCACCTCGAGGTTCCTCTCTATGGATGTCTCAGGAAAAAACAATCCCAGACATTGGACTGGATCCTAGGGTATCACGGTTTTCCAATCAGCCAGCAGGACCGTATACTGGAAGATCAAGCCAAGATGTAACTAGTGTATCAACAAGATCAACCGAGACTTTTGGGCAGCAAAAACAAAGATACTGGTCATCCTCCCCGCCACCTGCTCACTCACCTTCATCTGCTGCCCCTTTTGGACGTCAGCGTTCCCCAAGTCCTGCTGAGTCTGATTTTTATCCTTCCAGATCATTTTCTCAATTGGGTCAAAACCCTCAAGAAGAATATAGGGACCAGAGAGCTTTGCCTCAACTTGCTAAAGATCCGCATGTCTTGGATCAAAATGCCTTACCCACTATAAGCCCAGATCTGACAAGTGCTAGTAATTTGTTGGCTGGTCTCTTAAAGAGCGGGTTCAAACCAAACAACACCAGTGATCTAGCAAGCTTGAGGGCACAGCCTCTTGTTCCAGCTGGGCCGTCTCCAAATACTTTGACTTCTTCTCTGGCTGCTGATCCATCCCTGCAAAGTCCAGCGATTGAAAATACCACTTTGCAAGCACAGGGACCAAACATTTCGCGGCCACCTTTGCCGCCAGGTCTACCACCGCCTCCATCTGTTGTCTCGTCAACACAGCTAGTGGATAAAGCTGCGCCACTATCAAGTCTTCTTAGTTCCCTGGTTAAAAAGGGATTAATCTCTTCGCCAGCAACTGATTCATCTGCTGCAATTTCGTCACAGCAAAGCAAACCATCAAGCATGAACACTACTGATATCATTGCTTCAGCATCTTTGCCTATTATCAAGCCTTCAGTTGGAAAGGAGACATCTACTCCTGATTCATCTGCTCCCAAAACTGTGGAAATCAAGATGAGAGACCTTATTGGGCTTGAGTTTAAGCCAGAGAAACTCCGCAAGTACAATGAGCATGTGATTGGCAGCCTCTTTGATGAACAAAGTCATCAGTGTAAAACATGCGGCGAAAGGTTTAGGCTTGAAGAAGAACTCAGACTGCACACGACCTGCCGTGGATCGAGGGAATCTGAGAGTATCTATGCTGGTATCGCACCTAAAAGATGGTACCCCAACAAGAGCAGTTACATTGATGGATCACTTGAAATGGAAAACAGCACTGAGGTATCTGCTGCTTCTGATGCAGATTTAGGTTCTGCAGAGGAAGTTTGCGAGTTTATGGTCCCTGCAGATGAGAGCCAAATCATCTGTGCACTATGTGGGGATCCATTTGATGACATTTATTCCATTGAGAGGGGCGACTGGATGTTCAAGGATGCAGTCTTTTTGGATTACCCCAAGGGAGAGGACAGCTGCGGAAATAATGTTGAGGGCAAAAAGGAGCATGTGCCCATAGTACATGCAAGATGTATGCCGAGAAGCTCAAATGATGGTATGGAGGAGGATTAG
Protein Sequence
- >EJB05_44142
MRASAASMETPAPARRSAAPDPKKPRLAQPAPRDPRSYAAASNGASQAAAAAELAMADELLAQYRTALGELTFNSKPIITNLTIIAGENLQAAKPIAGLICSNILEVPSDQKLPSLYLLDSIVKNIGKDYVKHFSARLPEVFCKAYKQVDPSIHHSMRHLFGTWKGVFPLAPLQMIEKELCFQSSANGSSGAASSRPDSQSQRPSNSIHGLLGSGGKAPLTTDAGDDIERANRISADRNAGRRLDALNARPSIQRTQRDPFSNPIHEKQAGRDARGLGFSNTPQQAAVGAGQVRSKAKVQDGIVGPYHTAGVGSSEQRLDRRSNLYANKDVRPAVRLDGALLPTPSISSDIISRASSNKNWKLSEEEEYVWDDVHSQAADYGSTNTVRKGEWMADEGNAKFTSLHRPKWTEVGAVEHLDSHKLDNLPRFGHAPVQDRRIPAYMDQEEYLQGKHEVESRIDREMRPDGQIFPPPRGSSLWMSQEKTIPDIGLDPRVSRFSNQPAGPYTGRSSQDVTSVSTRSTETFGQQKQRYWSSSPPPAHSPSSAAPFGRQRSPSPAESDFYPSRSFSQLGQNPQEEYRDQRALPQLAKDPHVLDQNALPTISPDLTSASNLLAGLLKSGFKPNNTSDLASLRAQPLVPAGPSPNTLTSSLAADPSLQSPAIENTTLQAQGPNISRPPLPPGLPPPPSVVSSTQLVDKAAPLSSLLSSLVKKGLISSPATDSSAAISSQQSKPSSMNTTDIIASASLPIIKPSVGKETSTPDSSAPKTVEIKMRDLIGLEFKPEKLRKYNEHVIGSLFDEQSHQCKTCGERFRLEEELRLHTTCRGSRESESIYAGIAPKRWYPNKSSYIDGSLEMENSTEVSAASDADLGSAEEVCEFMVPADESQIICALCGDPFDDIYSIERGDWMFKDAVFLDYPKGEDSCGNNVEGKKEHVPIVHARCMPRSSNDGMEED