Information report for EJB05_42063
Gene Details
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Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Brachypodium distachyon: BRADI_3g04140v3
- Gossypium hirsutum: Gohir.A05G004280, Gohir.D05G005000
- Musa acuminata: Ma09_g13240
- Oryza sativa: LOC_Os02g05840, LC2;OsVIL3
- Saccharum spontaneum: Sspon.04G0018260-1P
- Setaria italica: SETIT_016427mg
- Setaria viridis: SEVIR_1G084900v2
- Zea mays: GRMZM2G166162, GRMZM2G425774
Gene Resources
- Pfam: PF00041 PF07227
- UniProt: A0A5J9TBE8
- EMBL: RWGY01000039
- AlphaFoldDB: A0A5J9TBE8
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF5
- OrthoDB: A0A5J9TBE8
- CDD: cd15521
Sequences
CDS Sequence
- >EJB05_42063
ATGGACTCCTCCTCCCCTTCCTCCGTACTCGTGCTTGATCCAGCTAAGTGTCGTTTGCTGAGTGTCAATGAAAAGAGAGAATTTGTCCGTGAGCTGTTGAAGTCTCCTGATAGTGCACTTGAACGGATGGAGAAATGGACTCGCCGTGAAATCGTGGAGGTTTTGTGTGTTGATTTAGGAAGAGACATAAAATACTCTGCGTTGACAAAACATAGGCTCTTGGATCATCTCTTCAAAGTCGTTAATGGAAAAATGCGTCGACAGAAGAAACATGTGGAAAAGAAGTCAAGCCCTGATCTGGATGCAAATAATCATTCCCCTTGCAAAAGAAAGAGGATAAATAATAGTCCATTACCACCTCCAGATCTTAGGGCATTGACAAACAATGATTACCTTTGCCAAAATTCTGCTTGTAGGGCTACTCTTAATCTAGAAGACAAATTTTGCAGACGTTGCTCGTGCTGTATTTGTTTCAAGTATGATGATAATAAGGACCCTAGCCTCTGGCTGGTTTGCACTTCAGTTGAATCTGCGCAGGAAGATTCGTGTGGTTTGTCCTGTCATCTTGAATGTGCTTTTAAGGATGAAAGATCTGGTATTCTACAGAGTGGACAGTCAAAGAAACTTGACGGCGGTTATTACTGCACTCATTGTGGGAAACAAAATGATCTACTTGGGTGCTGGAAGAAACAACTGTTGATAGCAAAAAATGCTCGGCGGTTGGATGTGTTGTGCTATAGGATTTTTCTGAGTCATAAGATCCTTATATCCACTGAGAAGTACTTGATCCTGCATACAATTGTGGATGCAGCAATGAAGAAGCTGGAGGCTGAGGTTGGTCCTATTACTGACACTCGAGAGGTGGGTCATGGAATTGTTGGTCGTCTCGCAGTATGTGTTGAAGTTCAGAAGCTTTGTGCTTGTGCCCTAGAGACTCTCCACTCTATGTTCTCTAGTGGTTTAACTACTGATTCGAAAATTCAGAGATCTTGTATGGCTCATTGTGATGAACCTACCTGTAAGTCACAAAATGCAAAGTTGGGTGATCTTGGAGAAAGTGAAGTTGCTGGGCTGAAGAAATCTCCCAGGGTATTGATACCAGCTTTACATGAAGAACAAGAAAGACCCAGGTCAGGTGCTCAATCAGCTTTATTAAGTAGCCTGTTGAAGTTAATGGCGCAAAAGCAAGTAATTTTGAAGCAAAGCATGGCACTGCTTGTTCCTGATCCTGAGACTGTACCACTTGAACACAGTGGAAACAAGTTGGTTTCTGCACCTGAAAACTCCGTCTCTTTGCTAGGCGCCATACCAAGAGGGACAGAAAACTGCAAGAGGGTTTCAGGGAAGAGCTTTGAGGAGGCAAATCCTGGCATCCATGTTCCTCAGAATGGTTGTTTGGAGGATGAAATAGATCCGGAAAATTTGTCGTGCAAGGCTACTTTGGGAAGGTCGGAGGACAGTGGAGACAAGGATGGACATTCAGAACCCAGTTCAACTGTTAAAATATCATTGCATATGGATTCCTCAAACTTGATCCTCAACAGTAGGGGAAATCTGCAAAACCTGAGTGCAGATTCTGTTCAGATGGAGAATGAATCAGGTGCACAAACTGAAAATGTGTTCACTTGTCCACAGCTAAAACATGGCTCATTGGTACCCATAACTAAAATCAATGGAGCCAGTGCACCGAGCTTGAAATCAAAGTCTGACTACCACATTCTTCAAACTGGGCCGTCAAAGCCTGAAACAGAGCTGGGGAATTCATCGAACAAAAGCTCCTGTGGAAAACTGCTGGACATCGGCAAAAAGGATGAATCCTCAAAAACATCTTATGAATACTGTATCAAGGTGATCAGGTGGCTGGAATGCGAGGGTCACATTGAGACCAACTTCAGGGTGAAGTTCTTGACATGGCTCTGCTTACGTGCTAGCGCACATGAAAGGAGAACGGTCAATGTGTTTGTGGATAATCTCATTGATGATCCTGCAAGCCTTGCCGGTCAGTTGGCTGACGCCTTCTCAGATGCAATATACAGCAGGAGGCCGCATCCAGCTCCATCTCGTTTCTGCATGAGACTCTGGCATTGA
Protein Sequence
- >EJB05_42063
MDSSSPSSVLVLDPAKCRLLSVNEKREFVRELLKSPDSALERMEKWTRREIVEVLCVDLGRDIKYSALTKHRLLDHLFKVVNGKMRRQKKHVEKKSSPDLDANNHSPCKRKRINNSPLPPPDLRALTNNDYLCQNSACRATLNLEDKFCRRCSCCICFKYDDNKDPSLWLVCTSVESAQEDSCGLSCHLECAFKDERSGILQSGQSKKLDGGYYCTHCGKQNDLLGCWKKQLLIAKNARRLDVLCYRIFLSHKILISTEKYLILHTIVDAAMKKLEAEVGPITDTREVGHGIVGRLAVCVEVQKLCACALETLHSMFSSGLTTDSKIQRSCMAHCDEPTCKSQNAKLGDLGESEVAGLKKSPRVLIPALHEEQERPRSGAQSALLSSLLKLMAQKQVILKQSMALLVPDPETVPLEHSGNKLVSAPENSVSLLGAIPRGTENCKRVSGKSFEEANPGIHVPQNGCLEDEIDPENLSCKATLGRSEDSGDKDGHSEPSSTVKISLHMDSSNLILNSRGNLQNLSADSVQMENESGAQTENVFTCPQLKHGSLVPITKINGASAPSLKSKSDYHILQTGPSKPETELGNSSNKSSCGKLLDIGKKDESSKTSYEYCIKVIRWLECEGHIETNFRVKFLTWLCLRASAHERRTVNVFVDNLIDDPASLAGQLADAFSDAIYSRRPHPAPSRFCMRLWH