Information report for DRNTG_31354
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Daucus carota: DCAR_029206
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Manihot esculenta: MANES_11G098200
- Musa acuminata: Ma03_g06450
- Populus trichocarpa: POPTR_002G013100v3
- Prunus persica: PRUPE_1G356300
- Triticum aestivum: TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0AB40AGJ4
- RefSeq: XP_039114060.1
- InterPro: IPR001613 , IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
Sequences
CDS Sequence
- >DRNTG_31354
ATGGAAATTGAGGATGCTTCCCAATCTACCCCTCCTCCAGATCCTTCCCATTCTACCCCTCCCTCCGATCCTTCCCAATCTACCCCTCCCGCAGAGAATCTCGAGTCGCCGCCGGCGAGAAAGCGCCGACGGCGCAGGAAGCAGTTCCCGGAGATGGTCCCCTCCCTCTCCGTCCGCTCCCTCCGCCCCCAATCCACCTCCCGCTCCGGCACCGCCCCTCTCTACAACGACGCCCTGATTGATGAGCTTCTCCAGCTCCAGCCACGACCTCCCCGCCGGCGATCCAACGCCGGCTTCGATGGCTCCCTATCCGATCTCGACGTCGAAGCCCTCGTGGCGCTTTCCGTCGGATTCGCCTCCGACTCCCTCTCCGAGGATGAGATCCTTTCCTCCGTCGTGCCCACTCTCTCCGGCCCCATCCAATCCAACTACATCATCGTCCGCAACCACATCCTCTCCCGGTGGCGCTCCACCGTCTCCTCCCGCTTGTCCGAGTCCCACGCCATGGAATCCATCCGATCCGAGCACAAAAACCTAGTCTCCTCCGCCTTTTCCTTCCTCTCCTCCCACGGCTTCATTAACTTCGGCCTCGCCCCTGCCTTCCGTCTCCCCGCCGTTCCGTTCCCTCCGCGTGCCAACGTCGTTGTGATCGGCGCTGGAATCGCTGGCCTCGCTGCCGCCCGCCAGCTCATCACCTTCGGCTTCAAGGTCGCCATCCTAGAAGCCCGATCCCGCCCTGGTGGCCGCGTTCACACCCGCAAGATGTGCAGCGACGATGGGTCCATCGTTGCTGCCGCCGATCTCGGCGGTAGCGTGCTTACAGGCATTAATGGCAACCCTCTCGGCGTGCTCGCGCGGCAGCTAGGGTTCCCATTGCACAAGGTGCGGGACGTCTGCCCACTTTACCTCCCCGACGGCCGCCCGGTCGACACCGCCACCGACTCCCGCGTGGAGACAGCCTTCAACCAACTCCTCGATAAGGCCTGCAAGCTCCGTGAATCCATCCTAGAGGAATTCCAGTCCGTAGATGTCTCGCTTGGTACTGCTCTTGAAGCCTTCCGCAAGGCCCATGGAGTCGCTGAGACGCCGGAGGAGCGAATGCTTCTCAATTGGCATCTTGCAAACTTGGAGTATGCCAATGCGGCATTGCTCTCAGACTTGTCAATGGCTTACTGGGATCAGGATGATCCCTACGAGATGGGAGGTGACCATTGCTTCATTCCCGGTGGCAATTGTCGCTTTGTTCGAGCTCTGGCGGAGGATATTCCGATCTTTTATAATCAGACAGTGAGTAGGATTCACTATGGTTGTGATGGTGTGCTAGTTTATACCAATGACCAGGCTTTTCATGCCGATATGGCTCTCTGCACTGTACCTCTTGGTGTACTCAAGAAAGGCTCCATTGTGTTCGATCCTGAACTCCCTCCTCCAAAGCAAGATGCCATTAAGAGATTGGGGTTTGGATTGCTGAATAAGGTGGCGATGCTGTTTCCTCATGATTTTTGGGGTGGAGGGATTGATACATTTGGGCATTTGACAGAGGACCCAAGGCAGCGAGGGGAGTTCTTCCTGTTTTATAGCTATACTTCAGTATCTGGTGGACCATTGCTTGTTGCTCTTGTTGCAGGGGAGTCTGCAATAAAGTTTGAGAATTCATCGCCTGTTGAGGCGGTTGAAAGAGTCCTAGGAGTTCTTAGAGGCATTTTCACTCCGAAAGGGATTGAAGTCCCTGCTCCAATTCAGGTGGTTTGCACCCGGTGGGGGTCAGATAAGTTCACTTATGGGTCATACTCGTATGTTGCCATTGGTTCTTCAGGTGATGATTATGATGTTCTGGCGGAGCCTGTGGGGGATAGGGTCTTCTTTGCCGGGGAGGCTACTAATAGGAAATACCCGGCGACAATGCATGGAGCTCTGCTTAGTGGGTTTAGGGAGGCCGCTAATATATCAAGAGCAGCTAAGAGAAGTTCCATTCTATCAACAACAGATAGAGTGGATTGTAGAGAGGAGCAACTGGACTTGGATGATCTGTATCACAATCCTGATCTGTCTTTTGGGAGTTTTTCAGTTCTTTATGATCCTTGCTCAAGTGGTTCTGATTCTATTTCCTTGCTTCGCGTGGGGATTGGTGAGAGGAAGACAGGTTCTGGTTTGCTTTATCTGTACGCATTGATCTCCAAGAGGCATGTGATGGAGTTGCATGATATTGATGGGGATGAGAGAAGATTAAGTTTGTTATATCGCAACTTTGGCACAAAACTAGTTGGGAGAGATGGACTGGGGAGTCTCGGAGATAGTCTTTTAGGGAGAATAAAGGCTGCAAGATTGACCACTCCAAATACCGGTATCATGAAGGGATCATGTCAAATTTGA
Protein Sequence
- >DRNTG_31354
MEIEDASQSTPPPDPSHSTPPSDPSQSTPPAENLESPPARKRRRRRKQFPEMVPSLSVRSLRPQSTSRSGTAPLYNDALIDELLQLQPRPPRRRSNAGFDGSLSDLDVEALVALSVGFASDSLSEDEILSSVVPTLSGPIQSNYIIVRNHILSRWRSTVSSRLSESHAMESIRSEHKNLVSSAFSFLSSHGFINFGLAPAFRLPAVPFPPRANVVVIGAGIAGLAAARQLITFGFKVAILEARSRPGGRVHTRKMCSDDGSIVAAADLGGSVLTGINGNPLGVLARQLGFPLHKVRDVCPLYLPDGRPVDTATDSRVETAFNQLLDKACKLRESILEEFQSVDVSLGTALEAFRKAHGVAETPEERMLLNWHLANLEYANAALLSDLSMAYWDQDDPYEMGGDHCFIPGGNCRFVRALAEDIPIFYNQTVSRIHYGCDGVLVYTNDQAFHADMALCTVPLGVLKKGSIVFDPELPPPKQDAIKRLGFGLLNKVAMLFPHDFWGGGIDTFGHLTEDPRQRGEFFLFYSYTSVSGGPLLVALVAGESAIKFENSSPVEAVERVLGVLRGIFTPKGIEVPAPIQVVCTRWGSDKFTYGSYSYVAIGSSGDDYDVLAEPVGDRVFFAGEATNRKYPATMHGALLSGFREAANISRAAKRSSILSTTDRVDCREEQLDLDDLYHNPDLSFGSFSVLYDPCSSGSDSISLLRVGIGERKTGSGLLYLYALISKRHVMELHDIDGDERRLSLLYRNFGTKLVGRDGLGSLGDSLLGRIKAARLTTPNTGIMKGSCQI