Information report for DCAR_025630
Gene Details
|
|
Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Arabidopsis thaliana — AT5G07350
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0AAF1BB82
- EMBL: CP093349
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- CDD: cd20443
Sequences
CDS Sequence
- >DCAR_025630
ATGGCGACAGTAGGAGCATCGGGATGGTTGAAGGGAAAAGTCAAAGCTGTTCCATCTGGGGACTCTCTGGTTATAATGGGGAACACAAAGGCTGAAATTCCTCCCGAAAAGACCATAACCTTGTCATCTCTTGTTGCTCCAAGATTGGCTCGTAAAAACAGTGATGATGAACCTTTTGCATGGGAGAGCAGAGAGTTTCTAAGGAAGCTTTGCATAGGACAGGAGGTAATTTTTAAAGTGGACTATGAAGTACCAGCCATAGGCCGAGAATTTGGTTCTGTTTTTATTGGTGATAAGAATGTTGCGTGTCTCGTTGTTGCTTCTGGATGGGCAAAGGTTAGAGAGGTTCGGGAGCAAAGTCAGCAGAAAGCTGAAGTCAGTCCTTTTGTAGCAGAACTTTTGCGATTAGAAGAGCAAGCCAAACAACAAGGTGTTGGTCGCTGGAGCAAGGTGCCTGGTGCTTCTGAGGCAGCCATCAGAAAATTGCCTCCTTCTGCAGTTGGTGATCCTAGTAACTTGGATGCAATGAGCCTTTTAGCTGCCAATAAAGGTAGGCCCATGGAAGCTATTGTGGAGCAAGTTCGTGATGGAAGTAGTCTTCGTGTTTTTTTGCTTCCAGATTTTCAGTTCGTCCAAGTTTTTGTTGCTGGTATTCAGGCACCCTCTATGGGTAGAAGGGCTGTGCAGGACCCAATTCCTGAACCTGAAATGACCGCTGCAGCTGATGAAAATGGCAATGCTTCTACTAAATCTCGTGGCCCATTAACATCGGCACAGAGACTTGCAGCATCACCAGCCTCGTCTAATGAAGTTACCCCAGAATTATTTGGGCGGGAAGGGAAACACTTTACAGAGATTCGTGTATTACATAGAGATGTCCGCATTGTTCTGGAGGGTGTTGACAAATTCAGCAACTTGATCGGTTCCATATATTATCCTGATGGTGATGTTGCGAGGGATTTAGCTATGGAGCTTGTTGAACATGGCTTAGCTAAATATGTTGAATGGAGTGCTAGTATGTTGGATGATGAGGCCAAACGGAAACTAAAAAATGCTGAACTTGAAGCTAAAAAGAGTCGGTTAAGAATGTGGACAAGCTATGTGCCTCCGGTTTCTAATTCGAAGGCAATTCACGACCAGAATTTTAGTGGAAAGGTTATTGAGGTCGTGAGTGGGGATTGCATTGTTGTAGCAGATGATGCTCTTCCATTTGGCAGTCCATTAGCTGAGCGAAGAGTAAATCTCTCAAGTATAAGGTGTCCGAGACTAGGCAATCCTAGAAAAGATGAAAAAAGCCCCCCTTATGCTCGTGAAGCGAAGGATCTCTTGCGAACACGTCTAATCGGCCGTCAAGTACATGTTTCAATGGAATATTCTAGGAAGGTAAACTTGGCAGAGGGACCTGGTGCTCCAACTGGAACAACAGATAGGGTAATGGACTTTGGATCAGTCTTTTTGCCGAAGGATGGCGAGGCTCCACCTAGTGCAGGCAGTCAGCCGACAGGGATTAATATTGCTGAGTTAATTATTTCTCGCGGTTTTGGTGAAGTCATTAAACATCGTGATCTTGAGGTAAGATCAAATTACTATGATTCCCTTCTTGCTGCCGAATCGCGTGCCAAAGCTGGGAGGAAAGGGATGTATTCCGGCAAGGATGCTCCAGTGATGCACGTCAATGACTTTATAACGGCTTCATCTAAAAAAGCGAAAGATTTCTTGCCATTTTTGCAACGGAATAGAAGGATGACAGCTGTTGTGGAATATGTGTTTAGCGGTCACCGATTTAAATTATATATTCCAAAGGAAACTTGCAGCATCGCTTTCTCGATCTCAGGAGTGAGATGCCCAGGACGAGATGAGCCTTATTCCAGTGAAGCGATTGCACTAATGAGAAGGAAAATCATGCAGAGGGATGTTGAGATTGAAGTAGAAACTGTTGACAGAACAGGTACTTTTTTGGGATCTTTGTGGGAGTCAAGATCCAATGTCGCATTGATACTACTCGAAGCTGGTTTGGCCAGGCTTCAAACCTCTTTTGGTACAGATAGGATACCTGATATCCACCTGCTTGTGCAGGCTGAGCAGTCTGCTAAGAAGCAGAAATTGAAGATTTGGGAGAACTATGTTGAAGGAGAAGAAGTTTCTAATGGCCCAACTTCTGAAAGAAAGAAAGAAGAATTTAAGGTAGTGGTTACTGAAGTCCTTGGCGGTGGAAAGTTTTATGTTCAGCCAGCAGATCAGAAAGTGGCATCCATTCAGCAGCAGCTTGCTTCTTTGACACTCCAGGAGGCTCCTTTGATCGGTGCTTTCAATCCAAAGAAAGGCGACCTTGTCCTTGCACAGTTTAGTGCGGATAATTCCTGGAACCGAGCAATGATTGTGAATGCCCCTCGAGGTGTCGTTGAATCTCCAAAAGACAAATTTGAAGTGTTTTACATTGACTATGGAAATCAAGAAATGGTTTCTTTCAGCCAATTGCGACCTGTTGATTCTTCCGTGTCTTCGTCACCTGGCCTTGCGCAACTGTGCTGTCTTGCTTATGTAAAGGTTCCAAGTTTGGAGGAGGATTATGGGCAGGAAGCAGCTTTTAGTCTGAGCGAGCACACACTTAGTGGGCCAAAAGAGTTTAAGGCTGTTGTTGTAGAGAGGGATGCGTCTGGCGGAAAAGTCAAAGGACAAGGAACTGGTACTGTCCTTATGGTAACTTTGATTGATGAGGAGGCTAATGAAAGCATAAATTCCCGCATGTTGAAGGAAGGACTTGCTAGGTTGGAGAAGCGGAGGAGATGGGAGCCGGTCGAAAGAAAACAGGTGATTGACGAATTAGAAAAAGACCAAGAAGAAGCTCGTACTAAGAGGCTGGGCATGTGGGAGTATGGAGATATAATGTCAGATGACGAGGACAGTGCTCCAGTAAAGAAACCCAGTGGTGGCAGGAGTGCAGGCAGTCAGCCGACAGGGATTAATATTGCTGAGTTAATTATTTCTCGCGGTTTTGGTGAAGTCATTAAACATCGTGATCTTGAGGTAAGATCAAATTACTATGATTCCCTTCTTGCTGCCGAATCGCGTGCCAAAGCTGGGAGGAAAGGGATGTATTCCGGCAAGGATGCTCCAGTGATGCACGTCAATGACTTTATAACGGCTTCATCTAAAAAAGCGAAAGATTTCTTGCCATTTTTGCAACGGAATAGAAGGATGACAGCTGTTGTGGAATATGTGTTTAGCGGTCACCGATTTAAATTATATATTCCAAAGGAAACTTGCAGCATCGCTTTCTCGATCTCAGGAGTGAGATGCCCAGGACGAGATGAGCCTTATTCCAGTGAAGCGATTGCACTAATGAGAAGGAAAATCATGCAGAGGGATGTTGAGATTGAAGTAGAAACTGTTGACAGAACAGGTACTTTTTTGGGATCTTTGTGGGAGTCAAGATCCAATGTCGCATTGATACTACTCGAAGCTGGTTTGGCCAGGCTTCAAACCTCTTTTGGTACAGATAGGATACCTGATATCCACCTGCTTGTGCAGGCTGAGCAGTCTGCTAAGAAGCAGAAATTGAAGATTTGGGAGAACTATGTTGAAGGAGAAGAAGTTTCTAATGGCCCAACTTCTGAAAGAAAGAAAGAAGAATTTAAGGTAGTGGTTACTGAAGTCCTTGGCGGTGGAAAGTTTTATGTTCAGCCAGCAGATCAGAAAGTGGCATCCATTCAGCAGCAGCTTGCTTCTTTGACACTCCAGGAGGCTCCTTTGATCGGTGCTTTCAATCCAAAGAAAGGCGACCTTGTCCTTGCACAGTTTAGTGCGGATAATTCCTGGAACCGAGCAATGATTGTGAATGCCCCTCGAGGTGTCGTTGAATCTCCAAAAGACAAATTTGAAGTGTTTTACATTGACTATGGAAATCAAGAAATGGTTTCTTTCAGCCAATTGCGACCTGTTGATTCTTCCGTGTCTTCGTCACCTGGCCTTGCGCAACTGTGCTGTCTTGCTTATGTAAAGGTTCCAAGTTTGGAGGAGGATTATGGGCAGGAAGCAGCTTTTAGTCTGAGCGAGCACACACTTAGTGGGCCAAAAGAGTTTAAGGCTGTTGTTGTAGAGAGGGATGCGTCTGGCGGAAAAGTCAAAGGACAAGGAACTGGTACTGTCCTTATGGTAACTTTGATTGATGAGGAGGCTAATGAAAGCATAAATTCCCGCATGTTGAAGGAAGGACTTGCTAGGTTGGAGAAGCGGAGGAGATGGGAGCCGGTCGAAAGAAAACAGGTGATTGACGAATTAGAAAAAGACCAAGAAGAAGCTCGTACTAAGAGGCTGGGCATGTGGGAGTATGGAGATATAATGTCAGATGACGAGGACAGTGCTCCAGTAAAGAAACCCAGTGGTGGCAGGAGGTGA
Protein Sequence
- >DCAR_025630
MATVGASGWLKGKVKAVPSGDSLVIMGNTKAEIPPEKTITLSSLVAPRLARKNSDDEPFAWESREFLRKLCIGQEVIFKVDYEVPAIGREFGSVFIGDKNVACLVVASGWAKVREVREQSQQKAEVSPFVAELLRLEEQAKQQGVGRWSKVPGASEAAIRKLPPSAVGDPSNLDAMSLLAANKGRPMEAIVEQVRDGSSLRVFLLPDFQFVQVFVAGIQAPSMGRRAVQDPIPEPEMTAAADENGNASTKSRGPLTSAQRLAASPASSNEVTPELFGREGKHFTEIRVLHRDVRIVLEGVDKFSNLIGSIYYPDGDVARDLAMELVEHGLAKYVEWSASMLDDEAKRKLKNAELEAKKSRLRMWTSYVPPVSNSKAIHDQNFSGKVIEVVSGDCIVVADDALPFGSPLAERRVNLSSIRCPRLGNPRKDEKSPPYAREAKDLLRTRLIGRQVHVSMEYSRKVNLAEGPGAPTGTTDRVMDFGSVFLPKDGEAPPSAGSQPTGINIAELIISRGFGEVIKHRDLEVRSNYYDSLLAAESRAKAGRKGMYSGKDAPVMHVNDFITASSKKAKDFLPFLQRNRRMTAVVEYVFSGHRFKLYIPKETCSIAFSISGVRCPGRDEPYSSEAIALMRRKIMQRDVEIEVETVDRTGTFLGSLWESRSNVALILLEAGLARLQTSFGTDRIPDIHLLVQAEQSAKKQKLKIWENYVEGEEVSNGPTSERKKEEFKVVVTEVLGGGKFYVQPADQKVASIQQQLASLTLQEAPLIGAFNPKKGDLVLAQFSADNSWNRAMIVNAPRGVVESPKDKFEVFYIDYGNQEMVSFSQLRPVDSSVSSSPGLAQLCCLAYVKVPSLEEDYGQEAAFSLSEHTLSGPKEFKAVVVERDASGGKVKGQGTGTVLMVTLIDEEANESINSRMLKEGLARLEKRRRWEPVERKQVIDELEKDQEEARTKRLGMWEYGDIMSDDEDSAPVKKPSGGRSAGSQPTGINIAELIISRGFGEVIKHRDLEVRSNYYDSLLAAESRAKAGRKGMYSGKDAPVMHVNDFITASSKKAKDFLPFLQRNRRMTAVVEYVFSGHRFKLYIPKETCSIAFSISGVRCPGRDEPYSSEAIALMRRKIMQRDVEIEVETVDRTGTFLGSLWESRSNVALILLEAGLARLQTSFGTDRIPDIHLLVQAEQSAKKQKLKIWENYVEGEEVSNGPTSERKKEEFKVVVTEVLGGGKFYVQPADQKVASIQQQLASLTLQEAPLIGAFNPKKGDLVLAQFSADNSWNRAMIVNAPRGVVESPKDKFEVFYIDYGNQEMVSFSQLRPVDSSVSSSPGLAQLCCLAYVKVPSLEEDYGQEAAFSLSEHTLSGPKEFKAVVVERDASGGKVKGQGTGTVLMVTLIDEEANESINSRMLKEGLARLEKRRRWEPVERKQVIDELEKDQEEARTKRLGMWEYGDIMSDDEDSAPVKKPSGGRR