Information report for Csa15g079660
Gene Details
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Functional Annotation
- encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.
Homologous
- Brassica napus: BnaA07G0015500ZS, BnaC07G0032800ZS, BnaC07G0033600ZS, BnaA07G0015600ZS, BnaC07G0032700ZS, BnaA07G0015400ZS
- Brassica oleracea: Bo7g008410, Bo01285s010, Bo7g008400
- Brassica rapa: Bra038831, Bra038830, Bra038832
- Citrullus lanatus: Cla97C11G217990
- Glycine max: Glyma.13G097600, Glyma.09G056100, Glyma.17G062000
- Gossypium hirsutum: Gohir.A05G004200, Gohir.D05G004600
- Juglans regia: Jr11_25440
- Manihot esculenta: MANES_06G022700
- Populus trichocarpa: POPTR_018G090800v3
Sequences
CDS Sequence
- >Csa15g079660
ATGCAAAATCAAATGGAGTGGGATAGTGATTCCGATCTCAGCGGCGGAGATGAAGTAGCTGCAGCAGATGGATGGTTCGGCGGAGATAACGGAGCGATTCCGTTTCCGGTAGGTAGTCTTCCTGGAACGGCGCCGTGTGGGTTTGTGGTCAGCGATGCTCTTGAACCTGATAACCCTATCATTTATGTCAACACTGTTTTTGAGATGGTTACTGGGTATCGAGCTGAGGAAGTTATTGGTCGGAATTGCCGGTTCTTGCAATGTAGAGGGCCATTTGCTAAAAGAAGGCATCCAATGGTAGATTCTACGATTGTGTCGAAGATGCGACAATGTCTAGAAAATGGCATCGAGTTTCAAGGCGAGTTGCTCAACTTTCGGAAAGATGGATCTCCCTTGATGAACAAGCTGCGTCTAGTCCCTATCCGCGAAGAGGATGAAATCACTCATTTCATAGGTGTTCTTTTCTTCACAGATGCAAAAATTGATCTCGGCCCTGATTTATCTGCAAGAGACATCCCAAGAATATCTCGCTCGTTTACCTCTGCTTTACCAATTGGAGAGCGTAATGTGTCTCGTGGACTCTGTGGGATATTCGAACTGAGTGATGAGGTCATAGCTATCAGGATTTTGTCACAGTTGACTCCTGGTGATATTGCATCGGTTAGTTGCGTGTGTCGGCGGCTCAATGACTTGACAAAGAATGATGATGTATGGAGAATGGTCTGTCAAAACACATGGGGTACCGAGGCAACACGTGTTCTTGAGAGTGTTCCTGGTGCAAAGAGGATCGGTTGGGTGCGACTGGCTCGAGAGTTCACCACTCATGAAGCTACAGCATGGAGGAAATTTTCGGTTGGAGGTACTGTTGAGCCTTCCCGGTGTAATTTCAGCGCATGTGCGGTTGGGAACAGGATTGTTATCTTTGGTGGGGAAGGTGTGAATATGCAGCCGATGAATGATACGTTTGTGTTGGACCTTGGCTCTAGTAGTCCCGAGTGGAAATCTGTTCTGGTCAGCTCTCCTCCTCCAGGTCGCTGGGGTCACACGCTTTCTTGTGTCAACGGATCCCGTCTAGTAGTGTTTGGAGGTTATGGGAGTCACGGATTACTCAACGATGTGTTCTTATTAGACCTTGATGCAGACCCGCCGAGCTGGAGAGAAGTATCCGGATTGGCCCCTCCAATACCAAGATCGTGGCACAGTTCATGCACACTTGACGGCACTAAGCTGATAGTATCAGGTGGTTGTGCTGATTCAGGAGCTCTACTCAGCGATACATTCTTGCTTGACCTTTCGATGGATATACCAACTTGGAGGGAGATACCGGTTCCATGGACTCCTCCATCTCGCCTCGGACATACTCTAACCGTCTATGGTGACCGTAAGATCCTCATGTTTGGCGGTCTTGCGAAAAACGGTTCTCTGAGATTCCGCTCTAACGATGTATACACGATGGATCTTAGCGAGGATGAACCGAGTTGGAGACCTGTGATTGGTTATGGATCTAGCCTCCCGGGAGGCATGGCAGCTCCACCACCGAGGCTGGATCATGTGGCAATCAGCCTTCCCGGTGGTAGAATCTTGATATTTGGTGGTTCGGTTGCAGGGCTTGACTCAGCTTCTCAGCTTTATCTTCTTGATCCAACGGAAGAGAAACCTGCATGGAGGATACTGAATGTTCAGGGAAGTCCACCGAGGTTTGCGTGGGGACACACAACTTGTGTGGTGGGAGGAACTCGGTTGGTGGTCTTAGGTGGCCAGACCGGAGAAGAGTGGATGCTAAATGAAGCTCATGAACTGTTATTAGCAACTTCAACAACTGCAAGCAGTTGA
Protein Sequence
- >Csa15g079660
MQNQMEWDSDSDLSGGDEVAAADGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNTVFEMVTGYRAEEVIGRNCRFLQCRGPFAKRRHPMVDSTIVSKMRQCLENGIEFQGELLNFRKDGSPLMNKLRLVPIREEDEITHFIGVLFFTDAKIDLGPDLSARDIPRISRSFTSALPIGERNVSRGLCGIFELSDEVIAIRILSQLTPGDIASVSCVCRRLNDLTKNDDVWRMVCQNTWGTEATRVLESVPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNMQPMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLLDLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLSDTFLLDLSMDIPTWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGSLRFRSNDVYTMDLSEDEPSWRPVIGYGSSLPGGMAAPPPRLDHVAISLPGGRILIFGGSVAGLDSASQLYLLDPTEEKPAWRILNVQGSPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLATSTTASS