Information report for Csa10g048970
Gene Details
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Functional Annotation
- HLP1 is a member of the conserved hnRNP A/B family and contains RNA Recognition Motifs (RRM).It binds mRNA and appears to be involved in targeting alternative polyadenylation (APA). APA targets include genes involved in flowering. Loss of HLP1 function results causes late flowering under long and short day conditions. This phenotype is suppressed by loss of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc03772
- Brassica napus: BnaC04G0405400ZS, BnaA04G0118400ZS
- Brassica oleracea: Bo4g140290
- Brassica rapa: Bra025568
- Citrullus lanatus: Cla97C10G196620
- Cucumis melo: MELO3C026584
- Cucumis sativus: CsGy3G037790
- Glycine max: Glyma.19G061100, Glyma.05G003400, Glyma.16G070900, Glyma.19G003900
- Medicago truncatula: Medtr6g004810
- Nicotiana attenuata: A4A49_34905
- Populus trichocarpa: POPTR_001G344900v3
- Solanum lycopersicum: Solyc02g093340.3
- Solanum tuberosum: PGSC0003DMG400012601
- Vitis vinifera: VIT_14s0066g00480
Sequences
CDS Sequence
- >Csa10g048970
CGAGATGAACCGTCCTTATTTCTAAACACAAGAAACGAGGTTAAGATCGAGTGCTACGCGGAGTACAATAAGTATCCCCCACCCCCTTTCTCTTCTCTAAGGGTTTTAGGGATTTGCTCACTGCACGACACGGCTTTTAGGCGTCTGCCGCTTCTTCTTTCTTCTTCTTCGTTCTCCCAAGCCGTCATGGATCCTTATGGAACGGAAACAGTTATCGAAGATGGAATCCAGGATCCTAAACCATCCGATGATGTTGAAGACGATGACGACAAATCTCAGCCTCACTCTGGTGGCGGCGTCGATAGTGCTGGAAAGATATTTGTTGGAGGTTTAGCCAGGGAGACAACTTCAGCTGAATTCGTCAAGCATTTTGGGAAATATGGAGAGATCACTGATTCTGTCATTATGAAGGACAGGAAAACTGGACAGCCCCGAGGGTTTGGGTTTGTCACATACGCTGATGTCTCTGTGGTCGACAAAGTTATGGAGGACAATCACATTATCATTGGGAAGCAGGTTGAAATTAAGCGGACAATACCAAGAGGATCCGTGAGCTCTAATGATTTCAAAACCAAGAAGATATTTGTTGGTGGGATTCCTTCATCTGTGGATGATGGTAAGAACTTTTTCCATTTTTATCTCTATCATATACTTTTTGGTCAGAGACATGTTATATATATATTAATTCNGTGTACTTATACGATGTTTTGTGGAATTTGTAGAAAGATATTTGTTGGAGGTTTAGCCAGGGAGACAACTTCAGCTGAATTCGTCAAGCATTTTGGGAAATATGGAGAGATCACTGATTCTGTCATTATGAAGGACAGGAAAACTGGACAGCCCCGAGGGTTTGGGTTTGTCACATACGCTGATGTCTCTGTGGTCGACAAAGTTATGGAGGACAATCACATTATCATTGGGAAGCAGGTTGAAATTAAGCGGACAATACCAAGAGGATCCGTGAGCTCTAATGATTTCAAAACCAAGAAGATATTTGTTGGTGGGATTCCTTCATCTGTGGATGATGATGAGTTCAAGGAATTCTTTATGCAATTTGGAGAGCTGAAGGAACATCAGATTATGCGTGATCATTCAACTGGAAGATCGCGTGGCTTTGGGTTTGTTACATATGAAAGTGAAGATATGGTTGATCATCTCTTGGCGAAAGGGAACAGAATTGAGCTCTCAGGGACTCAGGTTGAGATAAAGAAGGCTGAGCCAAAAAAACCAAACTCAGTTACAACCCCGTCAAAGCGGTTTGGTGACTCTCGCTCTAACTTTGGTGGAGGCTATGGGGATGGTTATGGTGGCGGACACGGTGGTGGATATGGTGGTCCAGGTGGTCCTTACAAATCAGGTGGTGCCGGCTATGGAGGTGGCCGGTCTGGTGGTTATGGAGGATACGGAGGAGAATTCGGTGGGTATGGCGGTGGTGGATACGGTGGTGGCGTGGGACCTTATAGAGGAGAACCAGCACTTGGATATTCTGGTCGTTATGGAGGAGGTGGCGGTGGTGGTTACAACAGAGGTGGTTACGGTATGGGAGGAGGCGCTGGGTACGGTGGTGGACCTGGTGATATGTATGGCCCGCCATACGGTGAACCTGGAGGTGGGTATGGTGGACCAAGTGGCAGTTATGGAGGCGGTTATGGTAGTAGCGGTATTGGTGGGTATGGGGGTGGAATGGGTGCTGCTGGTGGAGGCTATAGAGGTGGTGGCTATGACATGGGTGGAATTGGAGGTGGAGGCGGAGGAGGTTACAATGGCGGTGGAGGAAGCGGGGGAGGCTCGTTTTATGGAGGAGGGGGAAGTAGAGGCGGATATGGAGGTGGTGGCAGCGGACGGTACCATCCTTATGGAAGGTTTGGTTGTCTTCTTTCTCCCTCAAAGCGAACTCANGGTGGTGGATACGGTGGTGGCGTGGGACCTTATAGAGGAGAACCAGCACTTGGATATTCTGGTCGTTATGGAGGAGGTGGCGGTGGTGGTTACAACAGAGGTGGTTACGGTATGGGAGGAGGCGCTGGGTACGGTGGTGGACCTGGTGATATGTATGGCCCGCCATACGGTGAACCTGGAGGTGGGTATGGTGGACCAAGTGGCAGTTATGGAGGCGGTTATGGTAGTAGCGGTATTGGTGGGTATGGGGGTGGAATGGGTGCTGCTGGTGGAGGCTATAGAGGTGGTGGCTATGACATGGGTGGAATTGGAGGTGGAGGCGGAGGAGGTTACAATGGCGGTGGAGGAAGCGGGGGAGGCTCGTTTTATGGAGGAGGGGGAAGTAGAGGCGGATATGGAGGTGGTGGCAGCGGACGGTACCATCCTTATGGAAGAAAGAAAGAGAAAGGAAGAGATCAGAGCAATTACCCTTACAAAGTCATTGAAATCACTCCTCCTCCCAAGTCTCTTGGCGTTCGTTGCCTTCCTCATAACCTTCAGTGCGGCGAGAACGTGATGATAGAAGGGAATACGTACACAATCTCTGCAGTGACTCACCGGTATCAGCTCAGGAAAGGCAAGTACGAGCCGAGTGAGAGGAGGCTTGATGTTCTCTCTGCCGCTAGATACGTCTTAAACCTTTACTTCGATAATTTACTCCAAAACTCTTGA
Protein Sequence
- >Csa10g048970
RDEPSLFLNTRNEVKIECYAEYNKYPPPPFSSLRVLGICSLHDTAFRRLPLLLSSSSFSQAVMDPYGTETVIEDGIQDPKPSDDVEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADVSVVDKVMEDNHIIIGKQVEIKRTIPRGSVSSNDFKTKKIFVGGIPSSVDDGKNFFHFYLYHILFGQRHVIYILIXCTYTMFCGICRKIFVGGLARETTSAEFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADVSVVDKVMEDNHIIIGKQVEIKRTIPRGSVSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYGDGYGGGHGGGYGGPGGPYKSGGAGYGGGRSGGYGGYGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGGYNRGGYGMGGGAGYGGGPGDMYGPPYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGAAGGGYRGGGYDMGGIGGGGGGGYNGGGGSGGGSFYGGGGSRGGYGGGGSGRYHPYGRFGCLLSPSKRTXGGGYGGGVGPYRGEPALGYSGRYGGGGGGGYNRGGYGMGGGAGYGGGPGDMYGPPYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGAAGGGYRGGGYDMGGIGGGGGGGYNGGGGSGGGSFYGGGGSRGGYGGGGSGRYHPYGRKKEKGRDQSNYPYKVIEITPPPKSLGVRCLPHNLQCGENVMIEGNTYTISAVTHRYQLRKGKYEPSERRLDVLSAARYVLNLYFDNLLQNS