Information report for Csa06g052460
Gene Details
|
|
Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Brassica napus: BnaA03G0222900ZS, BnaC03G0262000ZS, BnaA04G0290800ZS, BnaC04G0609100ZS
- Brassica oleracea: Bo3g039060, Bo4g196000
- Brassica rapa: Bra000409, Bra039296
- Gossypium hirsutum: Gohir.D12G111700
- Juglans regia: Jr07_06900, Jr12_04100, Jr12_04090
- Manihot esculenta: MANES_01G255300
- Populus trichocarpa: POPTR_002G160900v3
- Vitis vinifera: VIT_15s0046g02290
Sequences
CDS Sequence
- >Csa06g052460
ATGGGTCCAGCTGGTCGGACTGCCTCCACCACATCCGCTGCCTCTCCTTCTTCTTCTTCTTCATCTGTCCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAACAGCAGCTGGCTTCTAGGCAGCAGCAGCAGCAGCTGAGAAACTCAGACGCAAATGAAAACATGTTTGCATATCATCCTGGTGGGGCTCAGGGAATGGTGGGAGGTGCCAACTTTGCTTCGTCTACTGGCTCTATGCAAATGCCTCAGCAGTCTAGGAAGTTCTTTGAGTCTTCTCAACAACAACAACAACAACAGCAGGGTTCTTCCCAAGAGGGCCAGCAAAGTTTAAATCCTATGCAGCAAGCGTATTATCAGTTTGCTATGGCTCAGCAACAAAAAGCACATCACCAAGCTAGGATGGGAATGATGGGTTCATCAAGTGTGAGAAAGGATCAAGATGCACGGATGGGAATGTTGAATATGCAAGACTTGAATCCCATGCAGGCTTCTACTCAGCCCCAGGCCTCCTCGTCTAAGCCATCCAGCGACCAGTTTTCTCGCGGTGAAAGGCAGATGGAATCAGGTTCTCAGCAACGGAACGAAACAAAATCTCATCCCCAGCAGCAGGTGGGTACTGGACAACTAGCGCCTGGAAATATGACTAGGCCAATGCAGGCACCACCGGCTCAACAGGGAATGGTGGGAGGTGCCAACTTTGCTTCGTCTACTGGCTCTATGCAAATGCCTCAGCAGTCTAGGAAGTTCTTTGAGTCTTCTCAACAACAACAACAACAACAGCAGGGTTCTTCCCAAGAGGGCCAGCAAAGTTTAAATCCTATGCAGCAAGCGTATTATCAGTTTGCTATGGCTCAGCAACAAAAAGCACATCACCAAGCTAGGATGGGAATGATGGGTTCATCAAGTGTGAGAAAGGATCAAGATGCACGGATGGGAATGTTGAATATGCAAGACTTGAATCCCATGCAGGCTTCTACTCAGCCCCAGGCCTCCTCGTCTAAGCCATCCAGCGACCAGTTTTCTCGCGGTGAAAGGCAGATGGAATCAGGTTCTCAGCAACGGAACGAAACAAAATCTCATCCCCAGCAGCAGGTGGGTACTGGACAACTAGCGCCTGGAAATATGACTAGGCCAATGCAGGCACCACCGGCTCAACAGGTTGTCAATAACATGTCAAACAACCAGCTCGCATTTACACAACAGTGGCAGGCAATGCAGGCATGGGCGCGTGAGCGTAATATCGATCTCTCACATCCTGCCAACGCCAGCCAAATGAATCACATCCTTCAGACAAGAATGGCTGCCTTCCAGAAAGCTAATGAAGGCAATGTGGCTTCACAGTCACCATCTATTTCAATCTCTAGCCAGCCGGCTTCATCTTCTGTTGTTCCAGGTGAGAACTCACCGCGTACCAACTCTGCTAGTGACGTCTCTGGGCAGTCAGGATCAGCGAAGGCCAGACATGCCATATCTACTGGCTCATTTGCCTCTACTTCCAGTCCCAGAATGGTCAACCCTGCTATGAATCCCTTCTCCGGCCAAGGGAGAGATAATCCGATGTATCCTCGACATTTAGTTCAGCCTACAAATGGGATGCCCTCAGGAAATTCCCTGCAGACGTCTGCAAATGAGACTCCTGTTTTGGATCAGAATGCGTCTACAAAAAATAGTTTAGGTCCTGCTGAACATTTACAAATGCAGCAGCCTAGGCAACTGAATGCACCGACTCCAAATTTACTAGCTCCATCTGATTCTGGTCCACTCAGTGACTCGTCCCTTCAAACTGGACAGGGGACCCAACAAACACCGCAGCGATCAGGATTTACCAAACAACAACTCCATGTTCTCAAAGCCCAGATACTGGCATTTAGACGTTTGAAGAAAGGGGAAGGTTCTTTGCCTCCGGAGCTTCTTAAAGCTATTGCTCCACCACCGCTTGAACTGCAGATACAGAGGCAGATATCTCCTGTGAGAGGACAAGTTCAGGATAGATCTTCAGACAAAACTGGAGAAGACCAAGCAAGGTCGTTAGAGTGTGGAAAAGAGTCTCAGGCTGCTGCTTCTTCAAATGGACCGATTATTTCTAAAGAGGAAGTTAATGTTGCAGATACAGAAGTAGCTTTGACGACAGGCCACAGCCAATTATTTCAAAATCTGGAAAAAGAAGCTACTTCTACTGATGTGGTTACTAAAGAGGAGCAACAAACTGATGTATTCCCTGTTAAATCTGACCAAGGAGCAGATGCTAGTAATAATCCTAGAAGTGATCCTACAGCTGATAAGGGAAAGGCTGTTGCATCTACTTCTACTGATGTGGTTACTAAAGAGGAGCAACAAACTGATGTATTCCCTGTTAAATCTGACCAAGGAGCAGATGCTAGTAATAATCCTAGAAGTGATCCTACAGCTGATAAGGGAAAGGCTGTTGCATGTGATGGAGGCCAACCTAACGCTCCTCCACAAGAAAATTCTCCCCAGCAGCCTAAGGAAACAGCCTCTGCCAGGAAATATCATGGACCATTGTTTGATTTTCCCTTTTTCACTCGAAAACATGACTCTTATGGGTCTACACCAGCCAATGCCAATAACAATCTCACATTAGCATATGATATTAAAGATCTGATTTGTGAAGAAGGTGCAGAGTTCTTCAATAAAAAAAGAACAGACAGTTTGAAGAAGATAAATGGTCTACTAGCAAAAAATCTAGAAAGGAAAAGGATTAGGCCGGATCTTGTTTTGCGGCTTCAAATTGAAGAGAAAAAGCTTAGGCTATCGGATCTTCAGTCACGTGTTAGAGATGAAGTGGATCGACAACAACAGGAGATAATGTCCATGCCGGATAGGCCATACCGCAAATTTGTGAGGTTGTGCGAACGACAACGCCTTGAAATGAATAGACAAGTACTGGCCAACCAGAAAGCTGTTCGAGAGAAGCAGCTGAAAACCATTTTTCAGTGGCGTAAGAAGCTCCTTGAGGCTCACTGGGCTATACGTGATGCACGCACTGCTCGTAACAGGGGAGTGGCCAAATACCATGAAAAAATGTTGCGAGAGTTTTCAAAGAGAAAAGATGATGGCCGGAATAAAAGGATGGAAGCCTTGAAGAATAATGATGTAGAAAGGTACAGGGAGATGTTACTGGAACAACAAACAAATATACCTGGTGATGCTGCTGAAAGATATGCTGTTCTCTCATCATTTTTGACCCAAACCGAAGATTATCTTCATAAACTTGGAGGGAAGATTACTGCCACAAAGAATCAACAGGAAGTGGAGGAGGCAGCAAATGCTGCAGCAATAGCAGCGAGATTGCAGATTACTGCCACAAAGAATCAACAGGAAGTGGAGGAGGCAGCAAATGCTGCAGCAATAGCAGCGAGATTGCAGGGCTTGTCAGAGGAAGAGGTCAAGTCAGCAGCTGCTTGTGCTCGAGAAGAAGTTGTGATCAGAAATAGATTTACGGAAATGAATGCACCAAAAGAAAATTCGTCAGTCAACAAGTATTATACTCTGGCTCATGCTGTAAATGAAGTGGTTGTGAGACAACCTTCAATGCTTCAAGCTGGAACTTTGCGTGATTACCAGCTGGTTGGATTACAATGGATGCTATCGTTGTATAATAACAAATTAAATGGGATCTTGGCTGATGAGATGGGTCTTGGCAAAACTGTGCAGGTAATGGCACTGATTGCTTACCTTATGGAGTTTAAGGGGAATTATGGACCGCATCTCATCATCGTTCCGAATGCTGTTCTGGTGAACTGGAAGTCACTGCAAGTTGATCGTAGCTATCGATCAAAGTTGAGAACAGTTGTTGACTCGCACGGTTCAAGACAAGATCAGAGTGATTCATCCTCAAGACTTAGGAGTTTACCTGCAAAGAAGGTAGCTAATACTTCCAAGCTGCATGTATCGTCACCGAAATCTGGTAGATTGAATGCCACACAGCTTTCCGTGGAAGACAATGTCGAAGCTTCCAGAGAAACGTGGGATGGAACTAGTCCTATTGGCTCTTCAAATGCTGGTGCGAGAATGTCTCACATCATACAGAAACGGTGCAAACTCGTGACTAGCAAGCTCCAAAGGAGAATCGACAAGGAAGGTCAGCAGATTGTACCTATGCTGACAAATTTGTGGAAGAGAATTCAGAATGGTTATGCAGCTGGAGGTGTAAATAATCTTTTGGAACTACGAGAGATAGATCACCGGGTAGAAAGGCTAGAGTACGCAGGAGTTATGGAACTCGCATCTGACGTGCAGTTAATGTTAAGGGGGGCAATGCAATTCTATGGATTTTCACACGAGGTGAGATCTGAAGCAAGGAAGGTTCACAATTTGTTCTTTGATCTATTGAAGATGTCTTTCCCAGACACAGATTTCCGGGAAGCAAGGAATGCTCTTTCCTTTTCTGGCCCAACCCCAACTTTGGTTTCTACACCGTCCCCAAGAGGAGCAGGCTTTAGCCAAGGCAAGAGGCCAAAGTTGGTAAACGAGGCAGAAGCCGAGCCAAGCTCTCCTCAGAGAGCTCAACAACGTGAGAACTCAAGGATCAGAGTACAGATACCGCAGAAAGAAACAAAACTTGGGGGGGCAACAAGCCACACTGATGAATCCCCAATTTTAGCTCATCCAGGGGAATTAGTAATATGCAAAAAGAAGAGGAAAGACCGTGAGAAGTCTGCTCCGAAAACCCGAACTGCTGGCTCCAGCAGCCCGGTTTCACCACCTCCAGCTATGATTGGTCGTGGTCTCAGAAGTCCTGTGTCAGGTGGAGCTTCAAGGGAGACAAGGCTAGCACAACAGCAGCGCTGGCCAAACCAACCCACTCATCCAAACAACAGCGATGGGGATTTGTAA
Protein Sequence
- >Csa06g052460
MGPAGRTASTTSAASPSSSSSSVQQQQQQQQQQQQQQLASRQQQQQLRNSDANENMFAYHPGGAQGMVGGANFASSTGSMQMPQQSRKFFESSQQQQQQQQGSSQEGQQSLNPMQQAYYQFAMAQQQKAHHQARMGMMGSSSVRKDQDARMGMLNMQDLNPMQASTQPQASSSKPSSDQFSRGERQMESGSQQRNETKSHPQQQVGTGQLAPGNMTRPMQAPPAQQGMVGGANFASSTGSMQMPQQSRKFFESSQQQQQQQQGSSQEGQQSLNPMQQAYYQFAMAQQQKAHHQARMGMMGSSSVRKDQDARMGMLNMQDLNPMQASTQPQASSSKPSSDQFSRGERQMESGSQQRNETKSHPQQQVGTGQLAPGNMTRPMQAPPAQQVVNNMSNNQLAFTQQWQAMQAWARERNIDLSHPANASQMNHILQTRMAAFQKANEGNVASQSPSISISSQPASSSVVPGENSPRTNSASDVSGQSGSAKARHAISTGSFASTSSPRMVNPAMNPFSGQGRDNPMYPRHLVQPTNGMPSGNSLQTSANETPVLDQNASTKNSLGPAEHLQMQQPRQLNAPTPNLLAPSDSGPLSDSSLQTGQGTQQTPQRSGFTKQQLHVLKAQILAFRRLKKGEGSLPPELLKAIAPPPLELQIQRQISPVRGQVQDRSSDKTGEDQARSLECGKESQAAASSNGPIISKEEVNVADTEVALTTGHSQLFQNLEKEATSTDVVTKEEQQTDVFPVKSDQGADASNNPRSDPTADKGKAVASTSTDVVTKEEQQTDVFPVKSDQGADASNNPRSDPTADKGKAVACDGGQPNAPPQENSPQQPKETASARKYHGPLFDFPFFTRKHDSYGSTPANANNNLTLAYDIKDLICEEGAEFFNKKRTDSLKKINGLLAKNLERKRIRPDLVLRLQIEEKKLRLSDLQSRVRDEVDRQQQEIMSMPDRPYRKFVRLCERQRLEMNRQVLANQKAVREKQLKTIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNIPGDAAERYAVLSSFLTQTEDYLHKLGGKITATKNQQEVEEAANAAAIAARLQITATKNQQEVEEAANAAAIAARLQGLSEEEVKSAAACAREEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSLQVDRSYRSKLRTVVDSHGSRQDQSDSSSRLRSLPAKKVANTSKLHVSSPKSGRLNATQLSVEDNVEASRETWDGTSPIGSSNAGARMSHIIQKRCKLVTSKLQRRIDKEGQQIVPMLTNLWKRIQNGYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFYGFSHEVRSEARKVHNLFFDLLKMSFPDTDFREARNALSFSGPTPTLVSTPSPRGAGFSQGKRPKLVNEAEAEPSSPQRAQQRENSRIRVQIPQKETKLGGATSHTDESPILAHPGELVICKKKRKDREKSAPKTRTAGSSSPVSPPPAMIGRGLRSPVSGGASRETRLAQQQRWPNQPTHPNNSDGDL