Information report for Csa05g050840
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Brassica napus: BnaA06G0066100ZS, BnaA08G0288900ZS, BnaC08G0201700ZS
- Brassica oleracea: Bo8g059390, Bo5g010850, Bo9g046570
- Brassica rapa: Bra018441, Bra019938
- Daucus carota: DCAR_023771
- Glycine max: Glyma.13G264100
- Gossypium hirsutum: Gohir.D03G088800, Gohir.A02G094700, Gohir.D08G121000
- Populus trichocarpa: POPTR_011G148800v3
- Vitis vinifera: VIT_02s0025g03150
Gene Resources
- Pfam: PF04096
Sequences
CDS Sequence
- >Csa05g050840
ATGTTTGGTTCTTCAAATCCTTTTGGACAGTCATCTAACAACAGTCCATTTGGGACACAAACTCAACCTTTGTTCGGGCAGACCAGTAACCCGAGCAATAATCCTTTTGCTGTGAAGCCCTTTGGTAATTCTGCTCCTTTTGGCGCACAGACAGGGAGTTCCATGTTTGGGGGCACTTCAACCGGCGTGTTTGGTGCACCTCAAACTTCTTCTTCCCCTTTTGGTGCTTCATCACAAGCGTTTGGGAGCTCTACTCCGGCTTTTGGAGCATCTTCTGCTCCTGCATTTGGTAGTTCAACTTCACCTTTTGGTGGCACTTCTACGTTTGGTCAGAAGTCTTTTGGCCTCTCAACGCCTCAGTCAAGTCCTTTCGGAAGCACCACACAGCAATCACAGCCTGCCTTTGGAAACAGCTCTTTTGGTTCATCTTCACCTTTTGGTGCCTCAAACACGCCTGCCTTTGGTGCCTCTAGCACGCCTGCCTTTGGTGCCTCAAACACTTCCGCATTTGGCGCCTCAAACACTTCTGCGTTTGGAGCTACAAACACACCTGGGTTTGGCGCATCAAGCACTCCTGCCTTTGGCTCCACAAACACGCCTGCTTTTGGTGCATCAAGTACTCCATCATTCGGCGCCTCGAGTTCACCTGCATTTGGCGCGTCACCCGCTTCAGCCTTTGGTAGCTCTGGCACTGCATTTGGCAACAATGCCTTCGGTACTGGAGGTGTTTTTGGTGCATCAAGCACTCCTGCGTTTGGTGCATCAAGCACTCCTGCGTTTGGGGCTTCAAACACTCCTTCCTTTGGGGCATCAAGTACCCCATCTTTTAGTTTTGGCTCTTCCCCAGCTTTTGGACAGACTACCTCAGCATTTGGTAGCAGTGCCTTTGGCTCTACACAGTCTCCCTTTGGAGCCCAAGGTTCACAGGCTTCGACCCAAACAGTTGGGGGTCAATCAACTATCGGGGGTCAACAAGGGGGTAGTAGGGTCATGCCTTATGCACCTACAACTGAGGCAGAGTCAGGCACTGGTAGTAACCCTGGGAGGCTACAATCTATATCTGCCATGCCTGTATACAAAGAAAAAAACCAGGAGGAGCTTAGGTGGGAGGACTACCAGCGAGGAGATAAAGGTGGACAACGTCCTGCTGGTCAATCTCCTGGAGGTGCTGGATTCGGTGTAACAACTTCTCAGCCAAGTGTATTCTCTCCTTCACCAACGTTTGGCCAGACACCTGCAAATCCAACAAACCCTTTTGCACAGAAGACTCCAACAACTACCCCAAATTTTTCCTCTCCCTTTGGTCAACCCACTACCCCCTCCTTTGGTCAACCCACTACCCCATCCTTTGGTCAACCCACTACCCCATCCATGTTTGGGTCAATTGCATCAAATGCCACATCCGTTTTTGGATCATCCACTAGTTTTGCAACAAGCACACAACAGCCATTTGGTTCAGCCCCTGCACATGGGTCAAATTCACCATTTAGCATTGTTGGAAATAATAACACCAGTCAGTCATCTCCACTGTTCGGTTCAAACCCCTCATTTGGACAGAGTACTACTCCTGCATTTCAACAGACTAGTTCTGCGTTTGGACTGAATACCACTCCTACATTCCAACAGACTAGTTCTGCGTTTGGACAGAATACCACTCCTGCAAATGGACAAAGTAACATTTTCAGTACACCTTCCACTGGCTCCGCAAATCTGTTTTCAAGCTCTCCATCCTTCCCTACAAGCATCTCTCCCTATGGTCAAACAACGCCTGCTCTTTCGACACCTTACCAATCAGTTCAGCCAACTCAACCGTCAGGTGCTTTTGTTTTCAACAACTTTGCTCAAACCCAACCATCAGGTAATACAACTGGCGTTACAGGTGGAACGGGAACTTTTAGCCAAAGCAACTTTAAGCAAGTGCCTGCGTTCGGTAACTCTGCTATTATGCAACCAACTCCTGTTACAAACCCATTTGGAACGCTTCCTGCTTTGCCTCAGGTTTCAATTGGTCAAGGTGGAAATTCACCTTCCATTCAGTATGGAATCTCCAGCATGCCTGTCGTTGATAAGCCTGCTCCTGTTAGAGTATCTCCACTCCTGACTTCTCGACACCTTTTACAAAGGCGGGTCAGGCTACCTACAAGGAAGTACCGTCCTGGTGATGATGGTCCAAAGGTTCCATTCTTCAGCGATGAAGAGAATTCCAGTACACCTAAGGCTGATGCCCTTTTCATTCCAAGGGAAAACCCTAGAGCTCTATTTATACGCCCAGTTGAAAGGGTAAAATCAGAACATCCAAAGGATGGCCCGGCCCCACTGCAGGAGAATGGTAATAAGTCAAATGGGGTTACGAATGGAACCAACCATGAGAATAAGCATAACGGTGAAACTTGTGAGGCTCCTCCGGTTAAAGCCAATCAGAAACCGAACAGAACACATGAAAATCACGGAGGCGAGAAAAACGGTTCACACAGTTCACCAAGCGGAGCAGAGATCGAGACATTGATGCCGAAGTTGCACCACGCTGAATATTTCACAGAGCCTCGGATCCAAGAACTGGCTACAAAAGAAAGGGTTGATCCGGGTCATTGCAAGCGGGTGAAGGACTTTGTTGTTGGGAGACACGGTTACGGGAGTATAAAGTTTCTGGGAGAGACGGATGTGTGTAGACTCGACCTGGAAATGGTGGTTCAGTTCAAAAACCGAGAAGTGAATGTGTACATGGACGAGAGCAAAAAACCTCCTGTGGGTCAAGGATTGAATAAACCTGCGGTTGTAACTTTGCTGAACATAAAATGTATGGACAAGAAGACCGGTACGCAAGTGAAGGAAGGTGCCAGATTGGACAAGTATAAGGAAATGCTGAAGAGGAAAGCTGAGGAACAAGGAGCTAAGTTTGTGTCTTATGACGCTGTGAAAGGCGAGTGGACGTTCAAGGTGGAGCATTTCAGTTCCTACAAGCTTGGAGAAGAAGATGATATGTAG
Protein Sequence
- >Csa05g050840
MFGSSNPFGQSSNNSPFGTQTQPLFGQTSNPSNNPFAVKPFGNSAPFGAQTGSSMFGGTSTGVFGAPQTSSSPFGASSQAFGSSTPAFGASSAPAFGSSTSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSSFGSSSPFGASNTPAFGASSTPAFGASNTSAFGASNTSAFGATNTPGFGASSTPAFGSTNTPAFGASSTPSFGASSSPAFGASPASAFGSSGTAFGNNAFGTGGVFGASSTPAFGASSTPAFGASNTPSFGASSTPSFSFGSSPAFGQTTSAFGSSAFGSTQSPFGAQGSQASTQTVGGQSTIGGQQGGSRVMPYAPTTEAESGTGSNPGRLQSISAMPVYKEKNQEELRWEDYQRGDKGGQRPAGQSPGGAGFGVTTSQPSVFSPSPTFGQTPANPTNPFAQKTPTTTPNFSSPFGQPTTPSFGQPTTPSFGQPTTPSMFGSIASNATSVFGSSTSFATSTQQPFGSAPAHGSNSPFSIVGNNNTSQSSPLFGSNPSFGQSTTPAFQQTSSAFGLNTTPTFQQTSSAFGQNTTPANGQSNIFSTPSTGSANLFSSSPSFPTSISPYGQTTPALSTPYQSVQPTQPSGAFVFNNFAQTQPSGNTTGVTGGTGTFSQSNFKQVPAFGNSAIMQPTPVTNPFGTLPALPQVSIGQGGNSPSIQYGISSMPVVDKPAPVRVSPLLTSRHLLQRRVRLPTRKYRPGDDGPKVPFFSDEENSSTPKADALFIPRENPRALFIRPVERVKSEHPKDGPAPLQENGNKSNGVTNGTNHENKHNGETCEAPPVKANQKPNRTHENHGGEKNGSHSSPSGAEIETLMPKLHHAEYFTEPRIQELATKERVDPGHCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEMVVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTGTQVKEGARLDKYKEMLKRKAEEQGAKFVSYDAVKGEWTFKVEHFSSYKLGEEDDM