Information report for Csa05g005550
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Arabidopsis thaliana: AT2G44710
- Brassica napus: BnaC04G0052900ZS, BnaA05G0047300ZS
- Brassica oleracea: Bo4g023970
- Brassica rapa: Bra004858
- Citrullus lanatus: Cla97C05G083680
- Gossypium hirsutum: Gohir.D11G079300, Gohir.A11G074700
- Juglans regia: Jr14_02920, Jr05_02450, Jr05_02460
- Populus trichocarpa: POPTR_014G051500v3
- Prunus avium: Pav_sc0002465.1_g050.1.mk
- Prunus persica: PRUPE_2G120600
- Vitis vinifera: VIT_15s0021g01160
Sequences
CDS Sequence
- >Csa05g005550
ATGCCACCGAAGGTTGTGAAAAGGGGAGGCGCCGCGAGAAGAGGCGGGAGGGTAACGAGATCGGCGGTCAAGGCTCAGAGTACGCCGATGGAATCTGCCCACGATGAATCTGTTAATATCGGTGAGCTATCTGGCTCCGATGCTGTGGATGCGAAGGAGGTAGATGAAACTTTGGAGGAAGAGAATCCATTAGATGGGACGAAGCCATCGGATTCAATTAATGATTCTGTAGCTTCAGCGAATCCGAATGATGTTGTTCCGTCGAAAAAGGAGATAAAGGATTCTGTGGATGATTTCGGAAAAGATGAAAGATTGGATTTAGATGACAATGAACCAGAGTATGAGGCTGAAGAATATGGCGGGGAGGAGTTTGAAGAGAGAGAATTGGGACAGGAGGATATTGAGTTAGTTAACGAGGAAGAAGAAGAGCTGCACGAGGAGATTGAGGTCGAGGAGGAAGGTGGTGAGTTTGAAGACGAGATTGGAGATGGTCCCGAGGAGCTTGAGAGTGAGCATGATGATGAGCATGAGCATGCTAATGAAGATGTCAAACATGGAGGAGACACTGTCGATGTGGAAGAAGAAGAGCATCATGATGTTCTCCATGAGAGACGTAAGCGTAAGGAGTTCGAAATATTTGTTGGAAATTTGGACAGAGGTGCTACCGAGGACGACTTGAAGAAAGTGTTTGGTCATGTGGGCGAGGTGACTGAAATTAGGATTTTGAAGAATCCTCTGACAAAGAAGAGCAAGGGTTCTGCTTTCTTGCGTTTTGCAACTGTGGAACAGGCAAAACGAGCTGTTAAAGAGCTTAAAAGTCCAATGATCAATGGTAAAAAGTGTGGTGTGACTGCAAGCCAGGATAATGATACCCTCTTCATTGGTAACATATGCAAGGCATGGACCCTAGAAGCTTTGAGGGAGAAGCTGAAACACTATGGAGTTGAGAATGTGGATGATATAACGTTGGTAGAGGACAGCAACAATGTCAACATGAATCGAGGGTATGCCTTCTTGGAATTCTCATCTCGCTCAGATGCCACGGATGCTCACAAACGTCTCCTCAAGAAAGATGTGGTGTTTGGAGTTGAGAAGCCTGCAAAGGTCTCTTTTGCTGATTCTTTCTTAGACCCAGAAGATGAGATAATGGCGCAGGTTAAGACTATCTTCATTGATGGTCTTTCACCTTCATGGAATGAAGAACGTGTTAGAGACCTTCTGAAAAGATATGGTAAACTAGAAAAGATTGAGCTTGCTCGCAATATGCCATCAGCAAGGAGGAAAGACTTTGGCTTTGTAACTTTTGATACTCATGATGCTGCTATGAGCTGTGCCAAATTCATCAACAACTCAGAGCTAGGCGAAGGGGAGGACAAGGCAAAAGTGAGAGCACGCTTATCTAGACCACTTCAGAAAGCAGGTAAAAGCAGGCAGTCCAGTCGCTCAGACCAGCGGTCTAGGCATGGGACTGGACGGTCTGGAAGGAGTTCATTTGCTCGTCTTCCACCCCGTAGCCTTCCTTCCTCTCGGAGTGCTAGAGGCGTTGGATCTCGGGCCCCATCTTCTAGTGCAAAGAGAGCGGCTGGATCAAGGGGAAGACGTCCACGCCCACCTCTACCTCCGCCTGCAAGAGTCAGGCCCTTGCCACCACCTGCTAGGTCATATGATAGAAGACCTCCAGTTCCTCTGTATCCAAAGGCTAGCTTGAAGAGGGACTATGGTCGGCGTGATGATCTTCCTCCTCCAAGAAGCAGACCAGCTGTGAGCTATAGTTCAAGGCTTTCTCCTGAGAGACATCTGTCCTACAGAGATGATTATGCACCTCGTGGCTCTGGTTATTTAGATCTTCCTAGAAGTTCGTCTCGCTCTGAAATGAGGAGGCCGTTCGTGGATGACCCTTACAGTTCAAGATTTGAAAGACCTCCCAGTTACAGTGAAGGAAGACCTCGCGCTTATGAACCTCTTCCTGGATCAAAGCGTCCATATGCTGCATTGGATGACGTTCCCCCTCGTTATGCTGATGTCGATGTTCGTCATTCAAGAGCCCGTCTGGACTATGATGTTGGCCCTTCTCAATATGGGGAATCCTATGGGGACCGGATTCCTAGATCTAGTCTAGGATATGGAAGCAGCCGAAATTCTATGTCAAGTCATGACTCGCGTGGCCCATACAGCAGTCGTCAAGGAATGGATTATGGAGGAGGTTCTTATAGTGGCAGCGATGTAGGAGGAATGTACTCCTCTAGTAGCTATGGTGGTGACCTACCCAGAAGAGATGGAGGAGGTAGCTCGTATTCTTCAATTTACTCAAGCCGTGGCTTGGGTGGTAGTAGTTACTCTGGTGGTGGTCCAGGATCATACTACTAA
Protein Sequence
- >Csa05g005550
MPPKVVKRGGAARRGGRVTRSAVKAQSTPMESAHDESVNIGELSGSDAVDAKEVDETLEEENPLDGTKPSDSINDSVASANPNDVVPSKKEIKDSVDDFGKDERLDLDDNEPEYEAEEYGGEEFEERELGQEDIELVNEEEEELHEEIEVEEEGGEFEDEIGDGPEELESEHDDEHEHANEDVKHGGDTVDVEEEEHHDVLHERRKRKEFEIFVGNLDRGATEDDLKKVFGHVGEVTEIRILKNPLTKKSKGSAFLRFATVEQAKRAVKELKSPMINGKKCGVTASQDNDTLFIGNICKAWTLEALREKLKHYGVENVDDITLVEDSNNVNMNRGYAFLEFSSRSDATDAHKRLLKKDVVFGVEKPAKVSFADSFLDPEDEIMAQVKTIFIDGLSPSWNEERVRDLLKRYGKLEKIELARNMPSARRKDFGFVTFDTHDAAMSCAKFINNSELGEGEDKAKVRARLSRPLQKAGKSRQSSRSDQRSRHGTGRSGRSSFARLPPRSLPSSRSARGVGSRAPSSSAKRAAGSRGRRPRPPLPPPARVRPLPPPARSYDRRPPVPLYPKASLKRDYGRRDDLPPPRSRPAVSYSSRLSPERHLSYRDDYAPRGSGYLDLPRSSSRSEMRRPFVDDPYSSRFERPPSYSEGRPRAYEPLPGSKRPYAALDDVPPRYADVDVRHSRARLDYDVGPSQYGESYGDRIPRSSLGYGSSRNSMSSHDSRGPYSSRQGMDYGGGSYSGSDVGGMYSSSSYGGDLPRRDGGGSSYSSIYSSRGLGGSSYSGGGPGSYY