Information report for Csa03g002190
Gene Details
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Functional Annotation
- Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs.
Homologous
- Actinidia chinensis: CEY00_Acc15976
- Arabidopsis thaliana: AT1G01040
- Brassica napus: BnaA10G0008800ZS, BnaC05G0010300ZS
- Brassica oleracea: Bo5g002780
- Brassica rapa: Bra033293
- Citrullus lanatus: Cla97C05G079940
- Glycine max: Glyma.19G261200, Glyma.03G262100
- Gossypium hirsutum: Gohir.D07G138400, Gohir.A07G133700
- Juglans regia: Jr07_10040
- Manihot esculenta: MANES_05G015200
- Populus trichocarpa: POPTR_002G181400v3
- Prunus persica: PRUPE_2G200900
- Vitis vinifera: VIT_15s0048g02380
Sequences
CDS Sequence
- >Csa03g002190
ATGGTAATGGAGGATGAGCGTAGGGAAGACATAACAAAGCCTTCTTACTGGCTAGATGCCTGCGAGGACATCTCCTGTGATCTTATCGATGATCTTGTCTCTGATTTTGATCCTTCCTCTGTTGCTGTCAATGAATCCACCGATGACAACGGCGTCATCAGTGATTTTTTCGGTGGAATCGATCACATTCTAGATAGTATCAAGAACGGTGGAGGCTTACCAGACAATGGCGTTTCTGAGACCAATTCTCACATCAAAGAGGTTAGTGTAACTCCTCAGTTGATTCCTGGGGAGGTTGCTTTATCTGTTAAGGAGAACGGGTTGCAAAAGAATGGTGGTAAGAGAGACCAAGAAGTGTCCAAAGAGGAAGAAGGAGAGAAGGATTGGAAGAGAGCTAGAGTTTGTAGTTACCAGAGTGAAAGGAGTAGTAACCTTTCAGGTAGAGGACAGGCTAATTCTAGGGACAAAGATAGGTTTATGAATAGGAAACGTACTCGTAATTGGGACGAGGCGGTTCACAATAAGAAAAGAGATTGTTACAGTCACAGAAGAGATGGTAGGGATAGAGAAGTTAGAGGTTATTGGGAGAGGGATAAAGTTGGTTCCAATGAGTTGGTTTATCGGTCAGGGACTTGGGAAGCTGATCACGAAAGGGATGTCAAGAAAGAGAGTTGTAGAACCCGAGAGTGCAATGACAAGGCAGAGGAGAATAAGAGTAAGCCTGAAGAACGTAAAGAGAAGGTTGTGGAAGAGCAAGCAAGGAGATACCAGTTGGATGTGCTTGAACAAGCCAAAGCGAAAAACACAATTGCTTTCCTTGAGACCGGTGCTGGAAAGACACTTATCGCAATTCTTCTTATCAAGAGTGTTCATAAGGATTTAATGAGCCGGAATAGAAAAATGCTCTCGGTGTTCTTGGTTCCTAAAGTGCCTTTGGTCTATCAGCAAGCAGAAGTGATCCGTAATCAAACTAGTTTTCAAGTTGGGCATTATTGTGGTGAGATGGGACAAGATTTCTGGGATGCTCGAAGGTGGCAGCGAGAGTTCGAGTCTAAGCAGGTTCTAGTAATGACAGCACAAATTCTGTTGAATATACTGAGGCATAGCATCATTAGAATGGAAACAATTAATCTTCTTATTCTCGACGAGTGTCACCATGCTGTCAAGAAACATCCATACTCATTAGTGATGTCAGAGTTTTACCACACAACCCCTAAGGACAAAAGACCTGCCATCTTTGGAATGACTGCTTCGCCCGTTAATCTAAAGGGTGTTTCAAGCCAAGTAGATTGTGCGATCAAAATACGCAACCTCGAGACCAAGTTGGATTCTATTGTTTGTACAATAAAAGACCGGAAAGAATTAGAGAAGCATGTGCCTATGCCTTCAGAGATTGTCGTTGAGTATGACAAAGCTGCGACTATGTGGTCTCTTCACGAGACAATAAAGCAAATTATTGCAGCCGTGGAAGAAGCAGCACAAGCAAGTTCAAGAAAAAGCAAGTGGCAGTTTATGGGGGCTAGGGATGCTGGAGCAAAAGATGAATTGAGACAGGTTTATGGCGTGTCTGAAAGAACGGAGAGCGATGGAGCTGCCAATTTGATTCATAAACTTAGAGCTATAAATTATACTCTTGCTGAATTGGGTCAGTGGTGTGCTTACAAGGTGGCACAATCATTCTTGACTGCTCTGCAAAGTGACGAGAGGGTGAATTTCCAAGTGGACGTCAAGTTTCAAGAATCATACCTCAACGAGGTGGTGTCACTCTTACAATGTGAGCTTCTGGAAGGCGCTGCTGCTGAAAAGGTCGCAACTGAAGTTAGCAAGCCAGAAAATGGTAATGCACATGACGAGATCGAGGAAGGAGAGCTCCCTGCTGATCATGTTGTCTCGGGAGGGGAGCACGTTGATAAAGTAATAGGTGCCGCAGTGGCTGATGGGAAAGTGACTCCAAAAGTTCAATCATTGATCAAACTACTCCTTAAGTATCAGCACACTGCTGACTTTCGAGCTATTGTTTTTGTTGAGAGGGTGGTTGCTGCTTTGGTTCTTCCAAAGGTTTTTGCTGAGCTGCCTTCTCTTCGTTTTATACGGTGTGCCAGCATGATTGGGCACAATAACAGCCAGGAAATGAAATCATCGCAAATGCAGGATACAATTTCCAAATTCCGAGATGGGCATGTGACACTATTAGTCGCCACAAGCGTTGCTGAGGAAGGACTCGATATTAGGCAATGGCCAAGAAAGCCTGGATCAGACTACATACTCATGGTTGAGAGGGGAAATGTATCTCACGCAGCATTCTTAAGGAATGCTAGGAACAGTGAGGAGACACTGAGAAAAGAAGCAATAGAAAGGACTGATCTCAGTCATCTCAAAGATACATCAAGGTTAATCTCAATTGATGCTGTGCCTGGTACAGTTTATAAGGTGGAGACAACTGGTGCCATGGTTAGCTTGAATTCTGCTGTTGGTCTTGTACATTTCTACTGCTCTCAGCTTCCTGGAGACAGGTATGCGATTCTTCGTCCGGAGTTTAGCATGGAGAACCATGAAAAGCCTGGAGGCCACACAGAGTATTCATGTAGGCTTCAGCTTCCTTGCAATGCACCATTTGAAATACTCGAGGGTCCTGTTTGCAGTTCAATGCGTCTTGCGCAACAGGCTGTATGTCTAGCTGCTTGCAAGAAACTGCATGAGATGGATGCATTTACCGATATGCTATTGCCGGACAAGGGAAGTGGCCACGACGCTGAGAAGGCTGACCAAGATGATGAAGGTGAGCCTGTTCCTGGGACTGCTAGACATAGAGAGTTCTATCCTGAAGGTGTTGCGGATGTACTTAAGGGAGAATGGATTTTGTCAGGAAAGGAAATTTGTGAGAGCTCAAAGCTATTCCATTTATACATGTACAATGTGACATGTGTAGATCTTGGCTCTTCAAAAGATCCATTCCTAACCGAAGTTACAGAGTTCGCGATTCTTTTTGGCAATGAGCTGGATGCAGAGGTATTATCGATGTCTATGGATCTTTATGTTGCTCGGGCCATGATCACTAAAGCATCTCTTGCTTTCAAGGGATCGCTTGATATAACAGAAAACCAGCTATCATCTCTAAAAAAGTTTCATGTGAGATTAATGAGTATCGTGTTGGATGTTGATGTTGAACCCTCAACGACACCATGGGATCCTGCAAAGGCCTACTTGTTTGTCCCTGTTTCTGACAATATGTCTATGGAACCCATAAAAGGGATAAACTGGGAATTGGTTGAAAAGATTACCAAAACCACTGTGTGGGACAACCCACTACAGAGAGCTCGTCCTGATGTATATCTCGGGACTAACGAAAGAACTCTTGGTGGTGACAGAAGGGAATACGGGTTTGGTAAACTTCGTAACAACATTGCCTTTGGTCAGAAATCTCACCCAACTTATGGTATTAGAGGAGCTGTTGCATCCTTCGATGTTGTGAGAGCTTCTGGATTGTTACCTGTAAGAGATACTTTTGAGAAGGAAGTAGAAGATGATCTATCAAAAGGAAAACTGATGATGGCTGATGGGTGCATGGTTGCAGAAGATCTTGTTGGAAAAATAGTGACAGCCGCACATTCCGGGAAGCGGTTTTACGTTGATTCAGTTTGTTATGACATGAGTGCAGAAACATCATTCCCAAGGAAGGAGGGATATCTTGGTCCCTTAGAGTATGGAGTTGATTTGAATTGTAAGCAACAACCTTTGATCAAAGGACGGGGTGTTTCATATTGCAAGAACCTCCTTTCTCCTCGGTTTGAACAGTCAGGTGAATCAGAGACAATCCTTGATAAAACATATTACGTGTTTCTTCCACCTGAAATATGCGTTGTGCATCCACTTTCGGGTTCACTTGTCCGAGGTGCTCAGAGGTTGCCCTCTATAATGAGAAGAGTTGAGAGCATTTTGCTCGCTGTTCAACTCAAAAATTTGATTAGCTATCATATTCCCACATCAAAGATACTGGAAGCCTTGACTGCCGCCTCGTGCCAGGAAACGTTCTGCTACGAGAGAGCTGAGCTTTTAGGAGATGCGTATCTAAAATGGGTTGTTAGTCGTTTTCTGTTTCTCAAGTATCCACAAAAGCACGAGGGTCAGCTTACAAGGATGAGACAACAAATGGTTAGTAACATGGTTCTTTATCGGTTTGCTCTGGTTAAAGGGCTTCAGTCATATATCCAGGCGGATCGTTTCGCTCCGTCTAGGTGGTCTGCACCTGGTGTGCCTCCAGTTTTCGACGAGGACACAAAAGAATCTTCTTTTTTTGATGAAGAGCAGAAACCTGTTAACAACGATGTGTTTGAAGATGGAGAGATGGAAGATGGTGAACTAGAGGGTGATTTGAGTTCGTACCGAGTCTTGTCTAGCAAAACGTTAGCTGATGTTGTTGAAGCTTTGATCGGTGTTTATTACGTCGAAGGGGGTAAGATTGCAGCTTATCATTTGATGAAATGGATTGGGATCCATGTGGAGGATGAACCTGAAGAAGTCGAAGGAACTATTAAACCTGCTAATGTTCCAGAGAGTATACTCAAGAGTATTGACTTTGTTGGTCTCGAGAGAGCTCTTAAATTTGAGTTTAAAGAGAAAGGTCTTCTTGTCGAAGCTATAACACATGCTTCAAGACCATCTTCAGGTGTTTCGTGTTACCAGAGATTGGAATTTGTTGGTGATGCTGTCTTAGATCATCTTATTACAAGACACCTGTTTTTCACATACACAAGCCTTCCTCCTGGTCGGTTAACAGATCTTCGTGCTGCAGCGGTTAACAACGAAAACTTCGCTCGTGTTGCCGTTAAACATAAACTCCACTTGTACCTTCGTCATGGTTCTAGCGCCCTTGAGAAACAGATTCGGGATTTTGTGAAGGAAGTTCAGACCGAGTCATCGAAACCGGGGTTTAACTCTTTTGGTTTGGGAGACTGTAAAGCCCCAAAGGTTCTTGGAGATATTGTTGAATCTATTGCAGGTGCTATTTTTCTTGATAGTGGAAAAGATACAACTGCAGCTTGGAAGGTTTTTCAACCTTTGCTTCAGCCCATGGTGACACCAGAGACACTTCCTATGCATCCAGTTCGAGAGCTACAAGAGCGGTGCCAGCAACAAGCGGAAGGATTAGAATACAAAGCAAGTCGAAGTGGTAACACAGCGACTGTGGAAGTGTTCATCGACGGCGTTCAAATCGGAGTGGCACAAAACCCGCAGAAGAAAATGGCTCAAAAGCTAGCGGCGAGGAATGCACTTGCAGCATTGAAAGAGAAAGAAATAGCGGAATCAAAGGAGAAGCGTGTGAACGGGAACACAGGAGAGAATCAAGTTGAGAATGAGAATGGAAACAAGAAGAATGGGAATCAGATGTTTACGAGACAAACATTGAACGATATTTGCTTGAGGAAGAATTGGCCAATGCCTTCTTACAGATGTTTGAAAGAAGGAGGACCAGCGCACGCAAAGAGGTTTACTTTTGCGGTAAGAGTGAATACAAGCGATAGAGGATGGACTGATGAATGTATTGGAGAGCCAATGCCAAGTGTTAAAAAGGCTAAAGATTCTGCTGCAGTTCTCCTAATTGAGCTTCTAAATAAAAGTTATTCTTGA
Protein Sequence
- >Csa03g002190
MVMEDERREDITKPSYWLDACEDISCDLIDDLVSDFDPSSVAVNESTDDNGVISDFFGGIDHILDSIKNGGGLPDNGVSETNSHIKEVSVTPQLIPGEVALSVKENGLQKNGGKRDQEVSKEEEGEKDWKRARVCSYQSERSSNLSGRGQANSRDKDRFMNRKRTRNWDEAVHNKKRDCYSHRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESCRTRECNDKAEENKSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSRNRKMLSVFLVPKVPLVYQQAEVIRNQTSFQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIIRMETINLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQIIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCAYKVAQSFLTALQSDERVNFQVDVKFQESYLNEVVSLLQCELLEGAAAEKVATEVSKPENGNAHDEIEEGELPADHVVSGGEHVDKVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLRFIRCASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQWPRKPGSDYILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVETTGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMENHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLAACKKLHEMDAFTDMLLPDKGSGHDAEKADQDDEGEPVPGTARHREFYPEGVADVLKGEWILSGKEICESSKLFHLYMYNVTCVDLGSSKDPFLTEVTEFAILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVSDNMSMEPIKGINWELVEKITKTTVWDNPLQRARPDVYLGTNERTLGGDRREYGFGKLRNNIAFGQKSHPTYGIRGAVASFDVVRASGLLPVRDTFEKEVEDDLSKGKLMMADGCMVAEDLVGKIVTAAHSGKRFYVDSVCYDMSAETSFPRKEGYLGPLEYGVDLNCKQQPLIKGRGVSYCKNLLSPRFEQSGESETILDKTYYVFLPPEICVVHPLSGSLVRGAQRLPSIMRRVESILLAVQLKNLISYHIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYRFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKESSFFDEEQKPVNNDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAAYHLMKWIGIHVEDEPEEVEGTIKPANVPESILKSIDFVGLERALKFEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIRDFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQIGVAQNPQKKMAQKLAARNALAALKEKEIAESKEKRVNGNTGENQVENENGNKKNGNQMFTRQTLNDICLRKNWPMPSYRCLKEGGPAHAKRFTFAVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLIELLNKSYS