Information report for Csa00793s020
Gene Details
|
|
Functional Annotation
- Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.
Homologous
- Actinidia chinensis: CEY00_Acc30068
- Arabidopsis thaliana: AT2G27120
- Brassica napus: BnaA06G0048900ZS, BnaC05G0060800ZS
- Brassica oleracea: Bo5g008850
- Brassica rapa: Bra018641
- Citrullus lanatus: Cla97C02G048110
- Cucumis sativus: CsGy6G012460
- Gossypium hirsutum: Gohir.A05G082500, Gohir.D05G085400
- Juglans regia: Jr14_17170
- Manihot esculenta: MANES_04G006100
- Populus trichocarpa: POPTR_004G185700v3
- Vitis vinifera: VIT_06s0061g01610
Sequences
CDS Sequence
- >Csa00793s020
ATGAACCTATCTGATATTGGACGCGTTAATTGCCAGCAACTGATTGATAACCTTGGTCGGGATCTGGAATATGCTATCACTGTAGAAGGGAAAATGAGAATGGATTCAATTTCCAATTATGATGAAGTGAAGGACGAAATCAAGAAAAAGGTAGTTTTTAGAAATATTGATTTTAGTGCTTATTCCCTTGATTCGGGTGCAAGATGGTACTCCATGGAAATGGCTGGTGTAGTTACCTATACTGGAGCCAAAATCATCCAGAATGCCCGTTTGCTTATTGATCGAATCGGGAAACCACTTGAGTTGGATACAGATGGTATATGGTGTTGTCTCCCTGGATCTTTTCCTGAGAACTTTACTTTTAAAACGATTGACATGAAGAAACTCACAATCTCTTATCCATGTGTAATGCTAAATGTTGATGTGGCAAAGAATAATACAAATGATCAATATCAGACTCTTGAAGATCCTGTACGCAAGACATACAAGTCACATAGTGAATGCTCAATTGAATTTGAAGTGGATGGACCGTACAAGGTATGCTTAAACTTTATTAAACTTTTACGTGTGCTGCTCTTTGATTGCTGCGTAGAAATATTTGTAATTCTTTCCATTCAGGCAATGATTATTCCTGCATCGAAAGAGGAAGGAATCTTAATTAAGAAGCGTTATGCTGTTTTCAATCATGACGGAACCTTAGCAGAACTCAAGGGTTTTGAGATCAAGCGTAGAGGGGAGCTGAAACTCATTAAAGTTTTCCAGGCCGAGCTTTTTGACAAATTTCTCCATGGATCAACTCTTAAAGAGTGCTATTCTGCTGTTGCAGCCGTCGCAAATCGGTGGCTTGACCTACTCGATAATCAAGGAAAAGATATTGCCGATAGTGAACTGCTAGATTATATATCAGAGTCAAGCACAATGAGCAAATCGTTAGCAGATTATGGTGAGCAAAAGTCATGTGCAGTGACCACCGCAAAACGCTTGGCTGAATTTCTTGGTGATTCAATGGTCAAAGATAAAGGACTTCGTTGCCAATACATTGTTGCTTGTGAGCCAAAGGGTACACCTGTTAGCGAACGGGCTGTTCCTGTTGCTATATTTGAAACAACGAAACCGGGTAAACCTTCTGTTATCTGCTGTGATTATGTATTCTTGCGTTCTTATCGATCAAATGTAATGGAAACGTCAAAATTCACAGGAATTATGAAGTATTATCTGCGAAAATGGTGCAAGACATCATCAGACGTCGGAATCCGTTTAATTATTGACTGGTCGTATTATAAGCAGCGCCTTAGTTCAGCTATCCAAAAAGTTATTACCATTCCTGCTGCAATGCAGAAGGTGGAAAATCCTGTGCCTAGGGTGAATCATCCTGATTGGCTCCATAAAAAGGTTCGTGAGAAAGAGGACAAATTTCGCCAGAGAAAACTAGTTGATATGTTTAGTTCAGCAAACAAAGACGGTGTGTCGGACACAGATCATTTGGTGACTGAAGATAATATGGAAGATATTGAGGATTTTTGCAAAGAAAACAGGCCTTCCGTGAAAGGGCCAAAGCCAATTGCACGTTCTTTTGAAGTAAAAAAAAAAATGACTGAACACGAGCAGAAAGAGAGCTGCGGTCCAGAGTTCCATGATATCTCATTTCAGAACATTGACAAGAACGTAAATTACCAAGGATGGCTTGAACTGAAAAAGAGAAAATGGAAAGTGACATTAGAGAAGAAGAAAAAACGAAGGTTGGGTGATCTAAGATCTTCAAAGCAGATTGATGCTCACGAGATAAATCAAAAAGTTGGTCTGGGAAGAGGAGGTGTAGGTTCATACTTTAGGAGGCCTGAAGAAGCCTTGACTAGTTCACATTGGCAGATAATACAACTGGTCCCAAGTCCACAGAGTGGGCAATTTTTCGCCTGGGTGGTTGTGAAAGGATTGATGCTTAAGATCCCATTGACAATCCCAAGGGTGTTTTACATTAATTCCAAAGCTCCTACAGTTGAAAAATTCCCGGGAAAGTGTGTCAACAAGATTCTTCCTCATGGAAGGCCTTCTTATAATTTGATTGAGGTTAAAATTCAGGAAGATCAATTTAAAAAAGAAAGCAAAATGCGTGCAGCTCTTCTTGCCAACCCTGAAATTGAGGGCATATATGAAACTAAGGTGCCTCTGGAGTTTAGTGCTATATGTCAAATTGGATGTGTATGCGAAATTGATAACACAGCTAAGCACCGTAATATCCAAGATGGATGGAAAATTGGTGAACTTCATATGAAAACTACAACTGAGTGTCGCTACTTGGACCGTTCAATTCCACTTGTTTACTTGTATAACAGCACCTCTACAGGGCGTGCTATGTATGTTTTATATTGTCATGCATCGAAGCGTATGTCTGCCGTGGTAGTTGATCCTTTTAATAGCAAGGAATTATTACCATCTGCCCAAGAGAGACAGTTTAGAGATAGTTGCCAAGAATTTTCAATTGACTTATTGTCTTGGGGTAGTATCCTTTTCCAGGTAGACTATGTTGACCATCCTGAAGCTGCCAAGAAGATTATACAGAAAGCAATAAGTGAATACAAAGAAGAAAATAGTGGACCAACTGTTGCTGTCATTGAATGCCCTGACTATAACTCCATGATGGAAGGTATTAAGGCCCTGGATGATTTCCCCTGTGTGAGGATTCCCTTCAACGGCGATGACAATAGTTATCAGCCTGTCTCCTGGCAACGTCCAGCAGCAAAAATAGCAATGTTCCGTTGTGCTGCAGCATTTCAGTGGTTGGATCAGAGGATTGCCCAATCAAGATACGCCCATGTGCCTCTGGGGAATTTTGGACTTGATTGGCTAACATTCACAATAGATATCTTCATGTCCAGGGCACTCCGTGGCCAGCAACAGGTCCTTTGGGTGTCAGATAATGGTGTTCCAGACCTCGGAGGTATAAACAATGAAGAGACATTCTTTGCTGATGAGGTGCAACAGACAAGTTTGGTATTCCCTGGAGCGTATAGAAAAGTGTCTGTGGAGCTAAAGATCCATCACTTGGCTGTTAATGCCCTTCTGAAAAGCAACCTTGTGAATGAAATGGAAGGAGGCGTCTTTTCGGGATTTGAAACAAATTCAGACGAGAACACCAGTTTTGATGAGACCACTGGATGTGCTCAAGCATTTCGTGTCCTGAAACAATTGTTTGATAATTGCTTTACTGATGTGCGTAAATATGAGAATATCTATGCTGATTCCATTTTGCAACGCTTGTCTTGGTGGCTCTGCAGCCCGTCCTCTAAGCTCCATGATCCAGCTCTTCATCTCATGCTTCACAAGGTCATGCAAAAGGTCTTTGCTCTGCTATTGACTGATTTGCGGAGATTGGGTGCTATGATAATTTATGCAGACTTCTCAAAGGTCATTATCGACACAGGGAAATTTGATCTATCTGCTGCTAAGGCCTATTGTGAAAGCTTGCTCACAGCGGTGGGAAATAGTTCTATCTTTGAGTGGATATTGCTCGAGCCGGTTCACTACTGGCACTCATTACTTTTCATGGATCAGTATAACTACACTGGTATCCAAGCTACCGATGATGAAAGTTCACCTGACGAAGTGGCTATTGAACAAAAATGGAGTGTTGCACGACATTTACCCGAGTATATTAAGAGTGATTTCACTATAATCGTTGCCGAGTTTATATTCCATCCCTGGAAATTTGCATTAGAGAAAAAAAAAGGCAGTTCAGAGAGTTTAGAGGCACAGATGGTAGAATATCTAAGAGAACAGATTGAATCCTATTTCACAGAGAGGCTTCTTAAGAAGGTTATTGATATCATGTCACACATGAAGGACATAAACGTTTCAGATGCATCTCGGTTTTCTGGTCAAACTCCCAAAGGAGATTACACGTTAGAATTTATACAGGTTATCTCTGCTGTTCTGGCTCTTGACCAGAATGTCCAGCACGATGTTCTGGTAATGAGAAAGAATCTGTTGAAGTACATTAAGGTAAAAGAGTATGCTGCTGAAGCCGAATTTCTTGATCCTGGGCCCTCCTGCATCTTACCTAATGTAGCTTGCAGCAACTGTGATGCCTACAGAGACCTAGATTTATGCAGAGACCCAGATCTATTAACAGAGAAAGAATGGTCATGTGCGGATACACAATGTGGGAAGATATATGACAGAGAGCAGATGGAGAATAGTCTTCTCCAGATGGTGAGACAGAGAGAGAGAATGTACCACATGCAGGATCTAGTGTGCATTAGGTGCAATCAGGTGAAAGCCGCTCATTTGACAGAGCAGTGTGAGTGTTCTGGTTCCTTTAGATGCAAAGAGAGCGGGTCAGAGTTCCACAAGAGGATGGAGATTTTCTTGGATATAGCAAAGCGCCAGAAGTTCAAAATGCTAGAAGAATGCACCTCTTGGATTTTACAATGCACCAGCTGCTAA
Protein Sequence
- >Csa00793s020
MNLSDIGRVNCQQLIDNLGRDLEYAITVEGKMRMDSISNYDEVKDEIKKKVVFRNIDFSAYSLDSGARWYSMEMAGVVTYTGAKIIQNARLLIDRIGKPLELDTDGIWCCLPGSFPENFTFKTIDMKKLTISYPCVMLNVDVAKNNTNDQYQTLEDPVRKTYKSHSECSIEFEVDGPYKVCLNFIKLLRVLLFDCCVEIFVILSIQAMIIPASKEEGILIKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLKECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLAEFLGDSMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETTKPGKPSVICCDYVFLRSYRSNVMETSKFTGIMKYYLRKWCKTSSDVGIRLIIDWSYYKQRLSSAIQKVITIPAAMQKVENPVPRVNHPDWLHKKVREKEDKFRQRKLVDMFSSANKDGVSDTDHLVTEDNMEDIEDFCKENRPSVKGPKPIARSFEVKKKMTEHEQKESCGPEFHDISFQNIDKNVNYQGWLELKKRKWKVTLEKKKKRRLGDLRSSKQIDAHEINQKVGLGRGGVGSYFRRPEEALTSSHWQIIQLVPSPQSGQFFAWVVVKGLMLKIPLTIPRVFYINSKAPTVEKFPGKCVNKILPHGRPSYNLIEVKIQEDQFKKESKMRAALLANPEIEGIYETKVPLEFSAICQIGCVCEIDNTAKHRNIQDGWKIGELHMKTTTECRYLDRSIPLVYLYNSTSTGRAMYVLYCHASKRMSAVVVDPFNSKELLPSAQERQFRDSCQEFSIDLLSWGSILFQVDYVDHPEAAKKIIQKAISEYKEENSGPTVAVIECPDYNSMMEGIKALDDFPCVRIPFNGDDNSYQPVSWQRPAAKIAMFRCAAAFQWLDQRIAQSRYAHVPLGNFGLDWLTFTIDIFMSRALRGQQQVLWVSDNGVPDLGGINNEETFFADEVQQTSLVFPGAYRKVSVELKIHHLAVNALLKSNLVNEMEGGVFSGFETNSDENTSFDETTGCAQAFRVLKQLFDNCFTDVRKYENIYADSILQRLSWWLCSPSSKLHDPALHLMLHKVMQKVFALLLTDLRRLGAMIIYADFSKVIIDTGKFDLSAAKAYCESLLTAVGNSSIFEWILLEPVHYWHSLLFMDQYNYTGIQATDDESSPDEVAIEQKWSVARHLPEYIKSDFTIIVAEFIFHPWKFALEKKKGSSESLEAQMVEYLREQIESYFTERLLKKVIDIMSHMKDINVSDASRFSGQTPKGDYTLEFIQVISAVLALDQNVQHDVLVMRKNLLKYIKVKEYAAEAEFLDPGPSCILPNVACSNCDAYRDLDLCRDPDLLTEKEWSCADTQCGKIYDREQMENSLLQMVRQRERMYHMQDLVCIRCNQVKAAHLTEQCECSGSFRCKESGSEFHKRMEIFLDIAKRQKFKMLEECTSWILQCTSC