Information report for Csa00532s340
Gene Details
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Functional Annotation
- Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.
Homologous
- Brassica napus: BnaC05G0560100ZS, BnaC01G0494500ZS, BnaA01G0420700ZS, BnaA01G0420600ZS
- Brassica oleracea: Bo5g155130, Bo1g158920
- Brassica rapa: Bra040518, Bra039117
- Daucus carota: DCAR_007093
- Lactuca sativa: gene-LSAT_4X6960, gene-LSAT_4X181301
- Vitis vinifera: VIT_01s0026g00150
Sequences
CDS Sequence
- >Csa00532s340
ATGGAAGCAGATTCAATGTTACTTGCAGAGGCTATTAAGAAAATATCTGGTTCTTTGACAAGCGAAACTGATGTTCTTTATGTGGAAGATGATGAATCCGATGTCGTTGATGCTACTGAGACAAACACTTGCAATGGTGATATTCCAGAGTGGGCACAGGTTTTGGAACCTGTGAAAAAGCTTCCAACAAATGTTGGGACTAGAATCAGAAAGTGTGTTTATGAAGCTTTAGAGAGAAATCCACCAGAGTGGGCAAAGAAGATATTGGAGCATTCCATCAGTAAAGAAATTTATAAAGGCAATGCTTCAGGACCAACAAAGAAAGCTGTCCTCTCATTGCTAGCGGATGTTCGAGGTGGAGATTTGGTGCAGAGGTCTGTTAAAGGAACCAAAAAGCGGACACCCATAGGTGTATCTGATCTCATTATGAAGAAATGCCGGGCTGTATTGCGTGGTGTTGCAGCCGCAGACGAGGATAAAGTATTCTGCACTTTGCTCGGGCGAAAGTTACTGAATTCCAGTGATAATGATGATGACGGGCTCCTGGGATCACCTGCCATGGTTTCGCGGCCCTTAGACTTCAGAACTATTGATTTGAGATTGGCTGCTGGTGCATACAACGGATCAACTGAAGCTTTTCTTGAGGATGTTCTTGAGCTGTGGAGTAGTATACGTGTTATGTATGCGGATCAGCCCGATTATGTGGAACTGGTTGCAACTTTGTCTGAAAAATTCAAGTCATTATACGAGGCTGAGGTTCTACCACTTGTTCAGAAACTTGTGGACTACATGAAATTGGAATGCTTAAATGCAGAGATGAAGAAGGAAATTAAGGAAATAGTTGTTTCAGTAAATAAACTTCCCAAGGCCCCGTGGGATGAGGGGGTATGTAAAGTATGCGGCGTTGACAAAGATGATGACAGTGTTCTCTTGTGTGATACATGCGATGCTGAGTATCACACATATTGTTTAAATCCACCTCTTATCAGAATTCCTGATGGAAATTGGTATTGTCCATCTTGTGTCATTGCCAAGCGCATGGCTCAAGAGGCTTTGGAATCTTACAAACTAGTCAGGCGGCGAAAAGGTAGAAAGTATCAGGGGGAACTCACCCGAGCCTCTATGGAAATGACTGCTCACCTGGCAGATGTGATGAAAGAAAAGGACTACTGGGAGTTCAGTGCTGAGGAGAGAATCATGCTGCTTAAGGTTCTATGCGATGAACTGCTCAGCTCATCCCTTGTCCATCAACACCTCGAGCAATGTGCCGAAGCGATAATTGAAATGCAGCAGAAATTGCGCTCTCTTTCCTCAGAATGGAAAAACGCAAAAATGCGGCAAGAATTCTTGATGGCTAAACTCGCAAAGGTTGAACCTAGTATTTTGAAGGAAGCAAGCGAACTACATAATTCAAGTCACTTTGCAGACCATATGGGATGTGATCAACGACCACAGGAGGGCGTTGTTGGAGACGGAGTTACTCATGATGATGAGACTTCCTCTACTGCATTTCTTAACAAAAATCAAGGTAAAGCTCCACTTGATACCGATTCTCAACCTGGAGATTTGCATGTTAATTCCGGTGCGAGCAAGATTTCTTCCCCAGAAAAAATTACATCCCCTGTGAGGCATGAGTTGCCTGTAGCAGATACCTCTCCTCATGTAACGGATATTATGTCTTGTGAAAAAGATACCTTGCACAAGTCCGTTGGAAGAATTCACGAAACACATTCTCTAAATTCCAATGCAGTGGAATTGCAGACAGCTCATGATGCATCTTCTCAGGCTTCTCAAGAGTTGCAGGCTTGTCAACAGGATTTGATTGCCACTAGTAATGATATTCAGAATCTGCAGCTATCAATCAGAAGTGTAGAGTCACAGCTTCTAAAGCAATCTATACGAAGAGACTTTCTGGGAAACGATTCTAGCGGTCGTTTATATTGGGGTTGCTGCTTCCCAGATGAAAATCCGCGTATACTGGTTGATGGAAGCATATCTTTGCAAAAACCTGTTCAAGCCGATTTGACGGGTTCAAGAGCCCCCTCTCCGTTTCTCCATGCCATTGACCATGGAAGACTAACGCTTTCACCCTGGACATATTATGAAACCGAAGCTGAGATAAGCGAGCTCGTCCAATGGCTTCATGATGATGACCCGAAAGAAAGAGACCTGAGAGAGTCTATTTTGTGCTGGAAAAGGTTACGATTTGGGGACCTTCAAAAGGAAAAGAAAGAAGCTCAGAATTTGTCTTTTCCTGTTTTGGCTAGGGGACTTGTGACCAAGGCTGCCATGTCAATGGAGAAGAGATATGGTTCATGCATCAAACTAGAGATGGAAACGTTTAAAAAGCGGGGGAAGAAAACAAAGGTTGCGGAGCAAGAAAATTTGTGTCGATGCGAATGCTTGGAAGCAATTTTGCCATCCATGATTCACTGCCTCATATGCCACAAAACATTCGCAAGTGATGATGAATTTGAGGACCACTCTGAGAGTAGGTGTATTCCTTACTCATTAGCAACTGAAGAAGCGAAGGAAATCACTGATTTTTCGAAAGCAAAAGAAAGTCTGAAATCCGATTATCTTAATGTTAAGTCTAGCGCCGGCAAAGATGTCGCTGAAATATCCAATGTTTCTGAACTTGATTCTGGGTTGATAAGATATCAAGAAGAAGAATCTATATCCCCATACCATTTTGAGGAGATCTGTTCCAAGTTTGTGACTAAGGATTCCAACAGAGATTTGGTTAAAGATATCGGTCTGATCGGCTCAAATGGCATCGCAACATTTCTTCCATCGTCTAATACTCATCTTTACGACTCAGTGCTTATCTCTGCCAATTCCAGTAAGCTAGATGGTGATGATTCAGGGGATCAGGTCATTTTTGCTGGTTCTGAAACCAATGTTGAAGGCTTAAATTCTGAATCTAACATGTCATTCGATAGATCTTTTACACACGACCTTGGCGGTCCACCGAGTAAACCAAGCGGAATGGGTTTTGGCTTCTCAGAGCTAAAGATTAAGAAATACTCAGGTAGTGGGTTGAAAAGCTGCTGTGTGGTTCCACAGGCTTCGTTGAAACGAATAACTGGCAAGGCGTTGCCGGTTTTTAGGTTCCTAAAAACCAACTTGCTTGATATGGATGTGGCACTACCTGATGAAGCTTTAAGACCGTCGAAATCGCATCCAGACCGTAGAAGAGCTTGGCGTATATTTGTTAAATCCGCGCAAAGCATTTATGAGTTGGTTCAGGCAACAATTGTGCTAGAAGACATGGTTAAGACAGGGTACTTGAAAAATGCATGGTGGTACTGGTCTTCCCTTTCAGCGGCTGCTAAAATATCGACTCTCTCGACGTTATCTGTCCGTATCTTCTCCCTTGATGCAGCTATTACGTACGATAAACTCATAACTCCATCAGATCCGATGGATGAAACAAATCCGATCATCAGCTTACCAGACCAGAAGTCGCAACCGGTTTCAGATTCACAAGAAAGAAGCAGCAGAGCAAACAGGCGATCTGGTAAGAAGAGGAAAGAACCCGAGGAGAGGCCGAAGTCCGGTTCATGGAATGGAACGGCGGTAGATGGCGGTTCAAGAGGTGAATGA
Protein Sequence
- >Csa00532s340
MEADSMLLAEAIKKISGSLTSETDVLYVEDDESDVVDATETNTCNGDIPEWAQVLEPVKKLPTNVGTRIRKCVYEALERNPPEWAKKILEHSISKEIYKGNASGPTKKAVLSLLADVRGGDLVQRSVKGTKKRTPIGVSDLIMKKCRAVLRGVAAADEDKVFCTLLGRKLLNSSDNDDDGLLGSPAMVSRPLDFRTIDLRLAAGAYNGSTEAFLEDVLELWSSIRVMYADQPDYVELVATLSEKFKSLYEAEVLPLVQKLVDYMKLECLNAEMKKEIKEIVVSVNKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRMAQEALESYKLVRRRKGRKYQGELTRASMEMTAHLADVMKEKDYWEFSAEERIMLLKVLCDELLSSSLVHQHLEQCAEAIIEMQQKLRSLSSEWKNAKMRQEFLMAKLAKVEPSILKEASELHNSSHFADHMGCDQRPQEGVVGDGVTHDDETSSTAFLNKNQGKAPLDTDSQPGDLHVNSGASKISSPEKITSPVRHELPVADTSPHVTDIMSCEKDTLHKSVGRIHETHSLNSNAVELQTAHDASSQASQELQACQQDLIATSNDIQNLQLSIRSVESQLLKQSIRRDFLGNDSSGRLYWGCCFPDENPRILVDGSISLQKPVQADLTGSRAPSPFLHAIDHGRLTLSPWTYYETEAEISELVQWLHDDDPKERDLRESILCWKRLRFGDLQKEKKEAQNLSFPVLARGLVTKAAMSMEKRYGSCIKLEMETFKKRGKKTKVAEQENLCRCECLEAILPSMIHCLICHKTFASDDEFEDHSESRCIPYSLATEEAKEITDFSKAKESLKSDYLNVKSSAGKDVAEISNVSELDSGLIRYQEEESISPYHFEEICSKFVTKDSNRDLVKDIGLIGSNGIATFLPSSNTHLYDSVLISANSSKLDGDDSGDQVIFAGSETNVEGLNSESNMSFDRSFTHDLGGPPSKPSGMGFGFSELKIKKYSGSGLKSCCVVPQASLKRITGKALPVFRFLKTNLLDMDVALPDEALRPSKSHPDRRRAWRIFVKSAQSIYELVQATIVLEDMVKTGYLKNAWWYWSSLSAAAKISTLSTLSVRIFSLDAAITYDKLITPSDPMDETNPIISLPDQKSQPVSDSQERSSRANRRSGKKRKEPEERPKSGSWNGTAVDGGSRGE