Information report for CICLE_v10031013mg
Gene Details
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Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Citrullus lanatus: Cla97C07G132430
- Cucumis melo: MELO3C025152
- Glycine max: Glyma.18G030200, Glyma.11G227300
- Gossypium hirsutum: Gohir.A05G316300, Gohir.D04G066700, Gohir.A10G229500
- Juglans regia: Jr12_24030, Jr07_37520
- Manihot esculenta: MANES_07G125200, MANES_10G017900
- Populus trichocarpa: POPTR_010G192900v3, POPTR_008G064400v3
- Prunus avium: Pav_sc0002574.1_g060.1.mk
- Prunus persica: PRUPE_2G246000
- Rosa chinensis: RchiOBHm_Chr1g0369351
- Vitis vinifera: VIT_13s0019g03380
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: V4TBH5
- EMBL: KI536726
- AlphaFoldDB: V4TBH5
- KEGG: cic:CICLE_v10031013mg
- OMA: CYTATPD
- InterPro: IPR006553 , IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF119
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: V4TBH5
- CDD: cd22159
- eggNOG: KOG1947
- STRING: 85681.V4TBH5
Sequences
CDS Sequence
- >CICLE_v10031013mg
ATGGAGGAGGACAAAAAGGTAAATAAAATGAACAGTGGGATGCCGGACATAGACACGGTGTTCGAATGCGTGATTCCGTACGTAGAGGATCCCAAGGACAGAGACGCCATCTCCCTAGTGTGTCGGAGGTGGTACGAGCTCGACGCCACCACTCGCAGGCACATCACAATCGCTTTGTGCTACACCACCACGCCTGCGCGTCTGCGGCGTCGTTTCCGAAACTTGGAGTCGTTGAAGTTGAAAGGGAAGCCGAGGGCGGCGATGTTTAATTTGATTCCCGAGGATTGGGGCGGATACGTCACGCCGTGGGTTGAGGAAATCGCGGCCTCGTTTAATTCTCTGAAGTCGATTCACTTTAGGAGGATGATTGTCAGGGATTCGGATCTCGAGGTTTTGGCCAAGAACAGAGGGAAGAATCTTCTTGTTTTGAAGCTTGATAAGTGTTGTGGTTTCTCTACTGATGGGCTTCTTCACGTCAGTCGCTCGTGCAGGCAATTAAGAACTTTGTTTTTGGAGGAGAGCTCAATTTTTGAGAAAGATGGTGACTGGCTTCATGAGCTTGCTTTATATAACACAGTTCTTGAAACATTAAACTTCTATATGACCGATCTTATCAAAGTCAATGTTGAAGACCTTGAACTTATAGCCAGAAATTGTCGGTCCTTATCTTCTGTAAAAACTAATGACTGCGAACTTTTGGACCTTGTTAATTTCTTTCAAATTGCAACTGCTTTAGAGGAATTTTGCGGGGGCTCCTTCAATCATCCACCAGAGAAGTACTCTGCTGTAGCATTCCCCCGAAGCATATGTCGTTTGGGTCTATCCTACATGGAGCAGGATCATATGTGGATAATATTCCCTTTTGCAGCCATGCTGAAAAAGTTGGATCTCCTTTATGCACTGCTTAACACTGAAGACCATTGTCTGTTGATTCAGAGGTGTCCCAACTTGGAAATTCTTGAGACGAGGAATGTAATCGGGGATAGAGGATTAGAAGTTCTTGCTCGGAGTTGCAAGAAACTAAAAAGGCTTAGGATTGAGCGAGGGGCTGATGAGCAGGGAATGGAGGATGAAGAAGGTCTTGTCTCGCAAAGAGGATTAATTGCTTTGGCTCAGGGCTGCCTAGAGCTGGAGTACATCGCAATTTATGTATCAGATATTACAAATGAATCTCTGGAGTGTATTGGTGCCAACTTGAGAAACCTCTGTGATTTCCGCCTAGTTTTGCTTGACCGAGAAGAGAAGATAGCAGACTTGCCGCTTGACAATGGAGTTCGAGCTCTGTTGATGGGATGTGATAAGCTAAGACGGTTTGGTCTGTATCTCCGACAGGGTGGTTTGACAGATACGGGTCTAGGATATGTTGGGCAGTACAGTCTGAATGTAAGATGGATGCTTTTGGGCTGCGTCGGTGAGACTGACGAGGGGCTTATAGCGTTTTCCAGAGGGTGCCCTAACCTGCGAAAACTGGAAATGAGGGGTTGTTCCTTCAGCGAGTATGCACTTGCAGCAGCCGTGATGCAACTGACCTCACTGAGGTACTTATGGGTGCAGGGTTATCGAGCATCAAAAGATGGCCGTGATATTTTAAGAATGGTTCGCCCTTTTTGGAATATCGAGTTGATTCCCCCTAGATTAGTTTCTGATACCGATCAGCTTGGAAACCCGATAGTGATCGAGCATCCAGCTCATATACTTGCATATTACTCCCTTGCTGGACAAAGAACAGATTTTCCAGAGACTGTTCGGCCGCTGGATACAGAATCCTTGCTCTCCGTGCAGAGCTGTACATAA
Protein Sequence
- >CICLE_v10031013mg
MEEDKKVNKMNSGMPDIDTVFECVIPYVEDPKDRDAISLVCRRWYELDATTRRHITIALCYTTTPARLRRRFRNLESLKLKGKPRAAMFNLIPEDWGGYVTPWVEEIAASFNSLKSIHFRRMIVRDSDLEVLAKNRGKNLLVLKLDKCCGFSTDGLLHVSRSCRQLRTLFLEESSIFEKDGDWLHELALYNTVLETLNFYMTDLIKVNVEDLELIARNCRSLSSVKTNDCELLDLVNFFQIATALEEFCGGSFNHPPEKYSAVAFPRSICRLGLSYMEQDHMWIIFPFAAMLKKLDLLYALLNTEDHCLLIQRCPNLEILETRNVIGDRGLEVLARSCKKLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCLELEYIAIYVSDITNESLECIGANLRNLCDFRLVLLDREEKIADLPLDNGVRALLMGCDKLRRFGLYLRQGGLTDTGLGYVGQYSLNVRWMLLGCVGETDEGLIAFSRGCPNLRKLEMRGCSFSEYALAAAVMQLTSLRYLWVQGYRASKDGRDILRMVRPFWNIELIPPRLVSDTDQLGNPIVIEHPAHILAYYSLAGQRTDFPETVRPLDTESLLSVQSCT