Information report for CICLE_v10030820mg
Gene Details
|
|
Functional Annotation
- Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.
Homologous
- Actinidia chinensis: CEY00_Acc25410
- Citrullus lanatus: Cla97C08G150500
- Gossypium hirsutum: Gohir.D06G175700, Gohir.A06G168200, Gohir.A05G293100
- Juglans regia: Jr12_21780, Jr07_34260, Jr07_34250, Jr07_34270
- Manihot esculenta: MANES_10G050300
- Populus trichocarpa: POPTR_008G035200v3, POPTR_010G227200v3
- Prunus avium: Pav_sc0001183.1_g600.1.mk
- Prunus persica: PRUPE_2G208600
- Rosa chinensis: RchiOBHm_Chr1g0362561
- Vitis vinifera: VIT_13s0019g04820
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: V4TJ10
- RefSeq: XP_006436500.1 , XP_006436501.1
- EMBL: KI536726
- AlphaFoldDB: V4TJ10
- KEGG: cic:CICLE_v10030820mg
- OMA: MKVEMAF
- InterPro: IPR002937 , IPR007526 , IPR036188 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF260
- SUPFAM: SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 3.50.50.60 , 3.90.660.10
- eggNOG: KOG0029
- STRING: 85681.V4TJ10
Sequences
CDS Sequence
- >CICLE_v10030820mg
ATGTTTACTGAATCAGTCCCTAAACATTGCCACAGTTTATTAGATTCTGCATATAATTATTTGGTTTCGAATGGTTACATTAATTTTGGGGTTGCACCAGAAATCAAGGAGAAGATTCCGGTGGAACCCAGTAGTAATAAGTTGAGAGTTTTGGTTATTGGTGCCGGGCTGGCAGGTCTGGCTGCAGCTCGACAGTTGATGAGGTTAGGATTTAGGGTTACAGTTTTAGAGGGTAGGAAGCGAGCAGGTGGACGAGTTTATACAAAGAAGATGGAGGGAGGGGCAGGGAATAGAATCAGTGCTTCTGCAGATTTGGGAGGGAGTGTGCTGACGGGGACATTGGGAAATCCGTTAGGGATCTTGGCTAAGCAGTTAGGTTCCTTGCTTCACAAGGTAAGAGATAAGTGTCCACTTTATAGATTGGATGGGAATTCTGTGGATCCGGAGATAGATATGAAGGTTGAGGCAGATTTTAACCGTCTTTTGGATAAAGCTAGTAGGTTGAGGCAGTTGATGGGGGAGGTTGCAATGGATGTGTCTCTTGGTTCTGCATTAGAGACCTTTTGGAGGGTTTATTGGGACAGTGGAAATGCAGAAGCAATGAATTTGTTCAATTGGCATTTGGCAAATTTGGAATATGCAAATGCAAGCTTGTTGTCTAAGCTTTCTTTAGCTTTTTGGGACCAGGATGATCCGTATGATATGGGCGGTGATCATTGTTTTTTGCCGGGAGGGAATGGGAGGTTAGTTCAGGCATTGGTTGAGAATGTTCCAATTTTGTATGAGAAGACTGTGCATACTATTAGGTATGGTAGTGATGGGGTTCAGGTGCTTGCTGGGAGTCAGGTATTTGAGGGTGATATGGTACTGTGTACAGTTCCACTTGGGGTTTTGAAAAGCGGTTCAATTAAATTTATTCCAGAGTTGCCTCAGAGGAAGCTTGATGCAATTAAGAGGTTGGGATATGGGTTGTTGAATAAAGTTGCAATGCTTTTTCCTTATGTTTTTTGGGAAACAGATCTTGATACATTTGGGCATCTGACTGATGATTCGAGCAGTAGAGGGGAGTTCTTTCTATTTTACAGCTATGCAACAGTTGCTGGTGGTCCTCTCTTGATTGCTTTAGTTGCAGGAGAGGCTGCACATAAGTTTGAGAGCATGCCTCCGACAGATGCAGTTACTAAAGTTCTTCAAATTCTTAAAGGCATATATGAACCAAAAGGAATCAACGTCCCAGAGCCAATCCAAACTGTTTGTACCAGATGGGGTGGTGATCCTTTTAGCCTGGGTTCTTACTCTAATGTTGCAGTGGGAGCGTCTGGAGATGATTATGATATAATGGCAGAGAGTGTGGGGGATGGAAGACTTTTCTTTGCAGGAGAGGCCACTATTAGGCGATACCCTGCAACTATGCATGGTGCTTTTCTTAGTGGGCTGAGGGAAACTGCAAAGATGGCTCACTGTGCTAATGCACGAGCCTTGAGGATGAAGGTGAAGGTAGGCAAAATCCCATCAAAGAATGCCTATTCTTGTGCTTCTGCTCTCACTGATCTGTTCAGAGAACCTGATTTAGAATTTGGGAGCTTTTCTGTTATTTTTAGCTGGAAGAATCCTGACCCAAAGTCACCATCTATATTAAGGGTGACATTTAATGATCCTCGAAAGAAGAATCATGGAGACCAACCTCATTCAAATAAAAGACTTTTTGAGCAGCTTCAGTCACATTTTAATCAGCAACAACAGCTTCATGTTTACACGTTATTAACAAGGCAACAGGTGCTTGATCTGAGAGAGGTGAGAGGAGGAGATGAAATGAGGTTGAACTTCCTCTGTGAGAAGCTGGGGGTGAAGCTGATTGGGAGAAAAGGTTTGGGATCTACTGCTGATTCTGTCATCTCTTCCATAAAAGCCGAGAGGGGCATTCGCAAACAAACTTCAACATTTTCAGCATCGAAGTTAGGTATTTCAAAGCTAAAAACAGGAACTTTGAAGCAGAAAATGATCAGAAAGGCGAAAATAGTGCGTAATGTCAAAAAGTCAGTGCCATCTCCTAATAAGTTGACAGCTCCTCCTAATTTAAAAGTGTCAAGCGAATGTATGATCACAAATCAAGTGCCTCCTACATCATCTGGTTCAGGGCAACATGCACGTGAGGTTCTAAAGCAATGA
Protein Sequence
- >CICLE_v10030820mg
MFTESVPKHCHSLLDSAYNYLVSNGYINFGVAPEIKEKIPVEPSSNKLRVLVIGAGLAGLAAARQLMRLGFRVTVLEGRKRAGGRVYTKKMEGGAGNRISASADLGGSVLTGTLGNPLGILAKQLGSLLHKVRDKCPLYRLDGNSVDPEIDMKVEADFNRLLDKASRLRQLMGEVAMDVSLGSALETFWRVYWDSGNAEAMNLFNWHLANLEYANASLLSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALVENVPILYEKTVHTIRYGSDGVQVLAGSQVFEGDMVLCTVPLGVLKSGSIKFIPELPQRKLDAIKRLGYGLLNKVAMLFPYVFWETDLDTFGHLTDDSSSRGEFFLFYSYATVAGGPLLIALVAGEAAHKFESMPPTDAVTKVLQILKGIYEPKGINVPEPIQTVCTRWGGDPFSLGSYSNVAVGASGDDYDIMAESVGDGRLFFAGEATIRRYPATMHGAFLSGLRETAKMAHCANARALRMKVKVGKIPSKNAYSCASALTDLFREPDLEFGSFSVIFSWKNPDPKSPSILRVTFNDPRKKNHGDQPHSNKRLFEQLQSHFNQQQQLHVYTLLTRQQVLDLREVRGGDEMRLNFLCEKLGVKLIGRKGLGSTADSVISSIKAERGIRKQTSTFSASKLGISKLKTGTLKQKMIRKAKIVRNVKKSVPSPNKLTAPPNLKVSSECMITNQVPPTSSGSGQHAREVLKQ