Information report for CICLE_v10018964mg
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;LHY1/CCA1-like protein, LATE ELONGATED HYPOCOTYL 1 gene b
Homologous
- Citrus sinensis: orange1.1g004262m, orange1.1g004260m, orange1.1g004258m, orange1.1g004257m, orange1.1g004251m, orange1.1g004250m, orange1.1g004715m, orange1.1g006139m
- Manihot esculenta: Manes.05G015600.1.p, MANES_05G015600
- Populus trichocarpa: Potri.002G180800.5, Potri.002G180800.4, Potri.002G180800.3, Potri.002G180800.1, POPTR_002G180800v3
- Ricinus communis: 30076.m004464
- Vitis vinifera: VIT_15s0048g02410
- Ziziphus jujuba: XP_015888949.1
Gene Resources
- Pfam: PF00249
- UniProt: V4U1M4
- RefSeq: XP_006444707.1 , XP_006444709.1 , XP_006444710.1
- EMBL: KI536661
- AlphaFoldDB: V4U1M4
- OMA: SHYQMDR
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF174
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: V4U1M4
- SMR: V4U1M4
- CDD: cd00167
- eggNOG: KOG0724
- STRING: 85681.V4U1M4
Sequences
CDS Sequence
- >CICLE_v10018964mg
ATGGACACCTACTCCTCTGGCGAAGACTTGGTTCTTAAGACAAGGAAGCCATATACAATTACGAAGCAACGTGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCGCTGAAGCTTTATGGCCGTGCTTGGCAACGCATAGAAGAACATATAGGGACAAAGAAAGCTGTGCAGATCAGAAGTCATGCACAAAAATTCTTTTCCAAGTTGGAGAAGGAGGCTCTTTCTAAAGGGGTTCCTATAGGTCAAGCAATTGACATAGACATTCCTCCTCCACGTCCTAAAAGGAAACCACGCAATCCTTATCCTCGAAAGACCTGCACAAATGCTCCTATGTCACAGATAGGAGCAAAGGATGGGAAACTTCGAAGTTCAGTTTCTTCTTTGCGTTGCAATCAAGTGCTGGACTTGGAGAAAGAACCAATTTGTGATAGGCCTAATGGTGATGAGAAGCCAACTTATACTATCGAAAGTCAGAAGGACAACTGCTCGGAAGTGTTTATACTGCACCAAGAAGCTCACTGTTCCTCTGTTTCTTCTGTGAATAAAAACTCCATGCCAACACCAGTGGGGCTCAGAGACTCTTGCAATCTCAGGGAATTTGTTCCATCACTGAAAGAAGTGGTAAATCAGGATGAAACACGTGAATCTTATGTCACTGTTGAACTTAAAGCAAATGAGAAGTTTGGTAAACCTGATGCCAAACTGGCACTTCAGGATAATGGCTCAAGTAAACCCTTGAACTTGGAGAACGCCTGCCCTTCACATGAGAAGTCAGTTCATGGTGAAAAAAGAGATGATGTGGCCGATGCATTGCCGACGGCTGAGGTGCAAGCTACGCAGAACTATCCAAGGCACGTAAATGTGCACATTCTAGATGGGAGCCTTGGAACAGGTACTCAAAGCCCTTCAGATATGCCTATGCAGGAGTCCATATTTCATCCTATAGGAGAAGTTCATGGAAATCCTAATCTGTTCACAAATCCAGCTGCGTCTGCTACTACTGAAAATGAGAGTAATGTGCCAAAATCTACTCATCAATCATTTCCAACTTTCCATCCTCCCTTTACCCAATTTCGCCATGATCAAGATGACTATCGATCATTTCTACACATCTCATCCGCATTTTCAAGTCTTATAGTGTCTACTCTGTTACAAAACCCTGCGGCCCATGCTGCAGCAAGCTTTGCTGCTACATTTTGGCCCTATACAAATATGGAAACTTCAGCTGATTCTCCTACATGTCCGCAGGGTGGTTTCTTATCTAGACAAATGAGCTCCCCGCCAAGTATGGCAGCTATTGCCGCAGCCACTGTAGCAGCTGCCACTGCATGGTGGGCAGCACATGGACTGCTTCCCTTGTGTGCCCCATTTCATACTCCTTTTACCTGCCCTCCTGCTTGTGCAACTGCAGTTTCATCAATGGATACTGCACAAGTTCCGGCAGCCAAGACAGACAAAAATGACAATACTCCTCCAAATCCTGCCTTAAAGGATCATCAACCAGACCTTGAATATTCTGAAGCTTTGCAAGCTCAAAATTCAGCGTCTAAATCACTCACTGTGTTAACATCAGATTCCGAGGAGAGTGCAAGTGCGAAGCTTAAAATGGAACTGAAAGCTACTGATCATGAGAAGAATTCTGAAGAAAATGAGCTTCATGATTCAAACAAAACAAAAAACAGAAAGCAGGTAGACCGTTCATCATGCGGTTCCAATACACCTTCTAGCAGTGAAGTTGAAACTGATGCATTAGAAAAGCAAGAGAAAGGCAAAGAGGAGTCTAAAGAAATTGATCCGAGTCTTCCTGCCACCGATCCTGGTAACCGTCGTAGTAGAAGCAGCAGTAACATTACCGATTCTTGGAAGGAAGTTTCTGAAGTGGGGCGGCTGGCTTTTCAAGCACTCTTCTCTAGAGAGGTATTGCCTCAAAGCTTTTCACCTCCACATGATCTGAAGGACAAAATGCAGCAGGACAATGTAGAGGATAAGCAAAACGGCAATAAGAAAGATGGAGATAAATCACTTTTCGATCTCAACAGCAAGACATGGGGTTCTTGTTTCGGCCATCAAGAGGTGGAGAAAAGCACGGTGTCCGGAGTCGAGAACAATGGGGGGGAGGGGCTGCTGACAATCGGGCTTGGGCATGGTAAACTGAAGGCCCGTCGAACTGGTTTTAAACCTTACAAAAGGTGTTCTGTGGAGGCCAAAGAAAACAGAATACTCAACACCGGCAACCAAGCCGAAGAGAAATGCCCCAAGAGGATACGCGTGGAAGGAGCAACAACTTGA
Protein Sequence
- >CICLE_v10018964mg
MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAKDGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIESQKDNCSEVFILHQEAHCSSVSSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGKPDAKLALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQATQNYPRHVNVHILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQSFPTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETSADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHTPFTCPPACATAVSSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESASAKLKMELKATDHEKNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEKQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSFSPPHDLKDKMQQDNVEDKQNGNKKDGDKSLFDLNSKTWGSCFGHQEVEKSTVSGVENNGGEGLLTIGLGHGKLKARRTGFKPYKRCSVEAKENRILNTGNQAEEKCPKRIRVEGATT